Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g106090.3.1
CDS Infomation

PsbP-domain protein 1 (AHRD V3.3 *** A0A0F7GZA5_9ROSI)
Sequence

ATGAGAGTTCTTCAAGCTTCCAACATCTACGGTGTTGGTTTTGGTATTCCATCCATTTCT
ACTCGCCCTAACTCTTCTTATCACCGCCATGCCACTATAGCCACAGGAGAAGCTTTGGCC
AAATCAGCTCCAATAGGAAGAAAGTTCTCGGAGCAGCATTCTTTGAAGAAGGGAGATATG
GAGAAAGAAGGAAATTCAGTTGTTCTCGAGAAAAAAGATTTTGCAGTTCCAAGGAGAAAG
GCTATGGCCCTGATACTCTCCAGTTTTGTGCTCTCAAATTATGAATTGCCCAAAGTTGCA
TATGCTCAATCTGTTGAGTTCAGGGAATATATTGATACCTTTGATGGCTATTCGTTTATG
TATCCTCGAAACTGGATTCAAGTGCGTGGTGCTGGTGCTGACATATTTTTCAGGGATCCT
CTTGTTTTAGATGAAAATCTCTCAGTGGAGATATCATCTCCTTCATCCTCTAAGTACAAA
AGTGTAAAAGATTTGGGTCCACCAGAAGAAGCTGGAAAGGGAGTCCTTAAACAATATTTG
ACTGAATTTATGTCAACTAGACTTGGTGTCAGACGCGAATCAAGTGTTCTTTCTACTTCA
TCAAGGGTAGCTGATGATGGGAAGCTGTATTATGATGTTGAGGTGAATATCAAGTCTTAC
GCGAACAATAACGAATTGGCTGTTATGCCACAAGATCGAGTTGCTCGTCTGGAATGGGAC
AGGAGATACCTTTCAGTCCTCGGAGTGGAAAACAACTGCTTATATGAATTGAGAATACAA
ACACCTGAAAAGGTATTTGTCCAAGAAGAAAGTGACATTCGTGCAATTATGAACTCCTTC
AGAGCAAATAAGATTGCAGCTTGA

Peptide Sequence

PEP ID

Solyc01g106090.3.1
PEP Infomation

PsbP-domain protein 1 (AHRD V3.3 *** A0A0F7GZA5_9ROSI)
Sequence

MRVLQASNIYGVGFGIPSISTRPNSSYHRHATIATGEALAKSAPIGRKFSEQHSLKKGDM
EKEGNSVVLEKKDFAVPRRKAMALILSSFVLSNYELPKVAYAQSVEFREYIDTFDGYSFM
YPRNWIQVRGAGADIFFRDPLVLDENLSVEISSPSSSKYKSVKDLGPPEEAGKGVLKQYL
TEFMSTRLGVRRESSVLSTSSRVADDGKLYYDVEVNIKSYANNNELAVMPQDRVARLEWD
RRYLSVLGVENNCLYELRIQTPEKVFVQEESDIRAIMNSFRANKIAA*

Transcript Sequence

Transcript ID

Solyc01g106090.3.1
Transcript Infomation

PsbP-domain protein 1 (AHRD V3.3 *** A0A0F7GZA5_9ROSI)
Sequence

AAATAAATAAAATCGTGGCAAAAATTGGGAATGTGGATTGGGCAGAATTTGTGATTATCT
TGTACAGCCTCACTCTTACTCAAAAAGCTCTTCCGCAGCTTTGGATCTTTATCTGTTTAC
AGTAACATGAGAGTTCTTCAAGCTTCCAACATCTACGGTGTTGGTTTTGGTATTCCATCC
ATTTCTACTCGCCCTAACTCTTCTTATCACCGCCATGCCACTATAGCCACAGGAGAAGCT
TTGGCCAAATCAGCTCCAATAGGAAGAAAGTTCTCGGAGCAGCATTCTTTGAAGAAGGGA
GATATGGAGAAAGAAGGAAATTCAGTTGTTCTCGAGAAAAAAGATTTTGCAGTTCCAAGG
AGAAAGGCTATGGCCCTGATACTCTCCAGTTTTGTGCTCTCAAATTATGAATTGCCCAAA
GTTGCATATGCTCAATCTGTTGAGTTCAGGGAATATATTGATACCTTTGATGGCTATTCG
TTTATGTATCCTCGAAACTGGATTCAAGTGCGTGGTGCTGGTGCTGACATATTTTTCAGG
GATCCTCTTGTTTTAGATGAAAATCTCTCAGTGGAGATATCATCTCCTTCATCCTCTAAG
TACAAAAGTGTAAAAGATTTGGGTCCACCAGAAGAAGCTGGAAAGGGAGTCCTTAAACAA
TATTTGACTGAATTTATGTCAACTAGACTTGGTGTCAGACGCGAATCAAGTGTTCTTTCT
ACTTCATCAAGGGTAGCTGATGATGGGAAGCTGTATTATGATGTTGAGGTGAATATCAAG
TCTTACGCGAACAATAACGAATTGGCTGTTATGCCACAAGATCGAGTTGCTCGTCTGGAA
TGGGACAGGAGATACCTTTCAGTCCTCGGAGTGGAAAACAACTGCTTATATGAATTGAGA
ATACAAACACCTGAAAAGGTATTTGTCCAAGAAGAAAGTGACATTCGTGCAATTATGAAC
TCCTTCAGAGCAAATAAGATTGCAGCTTGATAAACTTTGTTAAAGACTCGAAATGATAAC
ATGGGATCATTGATGTCTGTTTAGCTGTTGCTTTTTTCTCCAAATTGTTATTGCATAGCT
TTTGTCTTGTTCAGTGTTAATTCTCTACGTTGGAAACTAATTGACCTGATTATTACGGAA
CACCACTTCAGTATGATGAAACATCCATTTCTTTTTACCAAATCTACCTTGCGTAAAAGA
TCAGGTTGCCAATATTACAAGTTACTAACATAAAGAGAAAATGAAATAATGCCAAACAAT
GAAGGGAGAATCTGTCTTCTATTGTGAAAAAACTTTAAGATCATTTTTTACATTTCAAAG
AGGAGGAATTTTAACCTTACTCATTAATGGGGTACATCTTGTGAAATATAAAATATTTTA
TGGTGGGTACCAGTACGTATTCACACTAAGTTCTGATACAAGATAAGTAAACACCAAGTG
CTTTATAAAAATGAGTCTCAGAAGCATCAACATTGCAAGAGAACAGACTGCCACAAGTGA
TGAACAGAAACAGTAAAATCTACATTATTCATGTAACACTTGGCCAAAGATGACAGTTTA
TTTCTTGATAAGAATTGAGTTGCTATATTTATACTACCATTATATTTACAAGTAACATAA
TTCCACTACACATGAAGACTGTCACTCTACTTTAAACTGTTCAAGGACCAATTAGTTGCT
AGAGATTCAAGTAAAACTGTCAAAGAACAATCATAGAGCAAGTTGTGGTGTATGGACCAT
TTCTTGATGTTGGTTATAGCTGGACAAGTTGATGCACAATCTCAATGCCAAACAGTTCCT
GGTCTGCAATGAAGGGAGGCAAATCTACAGTATTTAGTGTTATCCCAAGTAATAAAAAAT
ACTTACTCTGCTGACAAATCCATGTCAAGAGAGCTAAAGAGGGTATAATGAAAAGCATCA
TCAAGATTGGTGTTGAGAGAACAATGATTCTCCTCAGCAGCTACTTCTGAGTTGTCCCTT
TCATAATCCTTTTTCCCAAAAGGCTTCAATTTTTCACTACATGATTTGTGTTGGTCTTCC
AAGATACTTCTCTCAGATTCATGCTGAAGTACAAGCCATTGTAATGATTGGATCACTTCT
TGGTCATGTAGTTGCTTCTCTTCAGCCAACCTTTTATATTGATTTGCTTCCATTTCAACT
AAACTCTTCTCATTCTGTAACCGCAAAATCATTGCCATTGTTTCCTCAGTTGCTGTAGCT
GCTGCCATTCTCTCCTTTTCAAGTTCCAAACGAGCAGCATTTGCTTTACGCCTTTCAACC
TTTACCATTTTTCTCAGTGACAAAACATCAAACACTTTGTCTTCATCATAACACTCTTGT
TCATACTCATCATTCTCATCATCCAATTCCTCATCTGAAACACATTTTACTCTATCAATC
ACATTTTTTCCCTTTTCAAAGTTCGAATTCATCAACAATCTTAACAACCCAGACTTGCAA
GACTTCATCTTTGCATTACAGTTCCCATCAAAATCATTTTTTGAGCAACACCCATTTCTC
AATTCACCTGATTTTCCACAAAAATACCAACTAAATTGCAATACCCTCAATCCCAAACCA
AACAACAAGAACAACCCCAAAACTTTATACACTTGCCCAAACCACCCAAACATAAGAAAC
CCAAATCCCAGATCAGCACTCAGACTCAAATGCTTCAGGGATTCAACACAATCCATGAAA
ACAAAATCGAAGAAACAACCCAGAAATCTCTTATTAAACTCAAAAACTGAGCACAAAATG
AACAAGAAATATACAAGACGAATAATCTGCATGTGGGTCTCAAAGATTTAAATGACACTG
TTTGTATATACAAAAGAACACTTGTTTTCTTGTTTCGAGATATGGGATTGGTTAGTGATG
AAAAAAAAAACAAGATTTACAGCAAAATTTGGTTATGGAAAGAAGCAGAAGATAGGGAAG
GCGAAGAGATCGAGGACAAAGGCAACGAACACTCATTTTTATCTCAGTACAACGGGCTGA
AAAAGACCGCACGATACGGACACTATCGGTTGGACTTTCTTGTAATTTTACCCTAAATTT
GATTAAGTAATTAATTAATCCTATGTTGTCAGAATTATTTCTGGATTACCCAAATATTCG
TTTTTAGAACATTGCCATATCAATTTCATTTATTTATTTTTTGCTAATATCCGTTGCATT
AGCTCTTTTTTCTTTTGGAAAAAAATTGATGGAAAATAAAACATGCTTTGGGACTTTTTG
GTCAGTAAAAATGTTTAAGACAATTAATTGCTTTATCTGGTTAAATAATGAAGGAAATAA
TGCATAATTGTTGATTATGCAAAATAAATTAAAAAAAATTAAAATGAAGTGAACGTTAGC
TTATTGCGTTTAAGAATATCAAATTCGTTTAAACATCATCATACCCTATTTTAAAAATGT
TTTAAGTACTATTACTCTAAACAGAACATGTTTGTCAGAAGTTAACATGAGTGTCAATAA
TTTATTGTTTGCACTTTACCAGTTTTGTCCCTAAAAATATATTATAATGTGCTATTCAAA
CGAAATAAAAGAGAGATTATTGTGTTCG