Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g105870.3.1
CDS Infomation

(E)-beta-ocimene synthase (AHRD V1 **** Q5CD81_CITUN)%3B contains Interpro domain(s) IPR005630 Terpene synthase%2C metal-binding domain
Sequence

ATGTCAATATTCTCCACAAGATATTTAGTTACCCCTTTTTCATCATTTAGCCCACCAAAG
GCCTTTGTATCAAAAGCCTGCAGCCTCTCCACTGGACAGCCACTTAATTATTCTCCTAAT
ATTTCCACTAATATAATTTCATCTTCAAATGGAATAATTAATCCTATTAGGCGTTCAGGG
AATTACGAGCCTACCATGTGGAATTATGAATATATTCAGTCCACACACAATCATCATGTG
GGAGAAAAATATATGAAGCGATTTAACGAGCTGAAGGCAGAAATGAAAAAGCATTTGATG
ATGATGCTTCATGAGGAATCACAAGAATTAGAGAAGTTGGAGTTGATTGATAATTTACAA
AGGCTTGGAGTGAGTTACCACTTCAAAGATGAAATTATTCAAATATTAAGGAGCATACAT
GATCAAAGTAGTAGTGAAGCCACGTCAGCAAATTCATTATATTACACTGCATTGAAATTT
AGGATCTTGAGACAACATGGATTTTATATCTCCCAAGATATATTAAACGATTTCAAGGAT
GAGCAAGGTCACTTCAAGCAAAGTCTATGTAAAGATACAAAAGGGTTGTTACAATTATAC
GAAGCTTCATTTCTCTCTACAAAATCAGAAACCTCTACTTTATTGGAATCAGCTAATACA
TTCGCAATGTCACATCTCAAAAACTATTTAAATGGTGGTGATGAAGAGAATAATTGGATG
GTGAAACTAGTGCGCCATGCCCTGGAAGTTCCTTTGCATTGCATGATGCTAAGAGTTGAG
ACAAGGTGGTATATTGACATTTATGAAAATATCCCAAATGCTAATCCTCTCCTGATCGAG
CTTGCTAAGTTGGATTTCAATTTTGTGCAAGCAATGCACCAACAAGAATTAAGAAATCTA
TCAAGGTGGTGGAAGAAGTCAATGCTTGCAGAAAAATTACCATTTGCAAGGGATAGAATT
GTTGAAGCTTTCCAATGGATAACTGGCATGATTTTTGAATCTCAAGAAAACGAATTTTGT
CGAATAATGTTGACAAAAGTCACTGCTATGGCTACAGTTATAGATGACATTTACGATGTT
TATGGCACTCTTGACGAACTAGAAATCTTCACTCATGCTATTCAAAGAATGGAGATAAAA
GCAATGGATGAGCTTCCACATTATATGAAACTATGTTATCTTGCACTCTTCAATACAAGC
AGTGAAATTGCGTACCAAGTTCTTAAAGAGCAAGGGATCAACATCATGCCGTACCTTACA
AAATCATGGGCAGATTTATCCAAATCTTACTTACAAGAAGCAAGATGGTACTACAGTGGA
TATACACCAAGTCTTGATGAATACATGGAAAATGCATGGATTTCAGTTGGAAGTTTAGTG
ATGGTAGTGAATGCATTTTTCTTAGTCACAAATCCAATTACCAAAGAGGTATTGGAATAC
TTATTCTCAAACAAGTACCCTGACATAATTCGTTGGCCTGCTACGATTATTCGTCTTACC
GATGACTTAGCTACATCATCCAATGAAATGAAAAGAGGTGACGTTCCGAAATCAATTCAG
TGTTACATGAAAGAGAATGGGGCAAGTGAAGAAGAGGCAAGAAAACATATCAATTTAATG
ATAAAGGAGACATGGAAAATGATAAACACAGCTCAACATGATAATTCATTATTTTGTGAA
AAGTTCATGGGTTGTGCAGTAAATATTGCAAGAACTGGACAGACCATATACCAGCATGGA
GACGGACACGGAATTCAAAATTATAAAATTCAGAATCGCATCTCCAAATTATTTTTTGAG
CCCATCACTATTTCCATGCCCTAA

Peptide Sequence

PEP ID

Solyc01g105870.3.1
PEP Infomation

(E)-beta-ocimene synthase (AHRD V1 **** Q5CD81_CITUN)%3B contains Interpro domain(s) IPR005630 Terpene synthase%2C metal-binding domain
Sequence

MSIFSTRYLVTPFSSFSPPKAFVSKACSLSTGQPLNYSPNISTNIISSSNGIINPIRRSG
NYEPTMWNYEYIQSTHNHHVGEKYMKRFNELKAEMKKHLMMMLHEESQELEKLELIDNLQ
RLGVSYHFKDEIIQILRSIHDQSSSEATSANSLYYTALKFRILRQHGFYISQDILNDFKD
EQGHFKQSLCKDTKGLLQLYEASFLSTKSETSTLLESANTFAMSHLKNYLNGGDEENNWM
VKLVRHALEVPLHCMMLRVETRWYIDIYENIPNANPLLIELAKLDFNFVQAMHQQELRNL
SRWWKKSMLAEKLPFARDRIVEAFQWITGMIFESQENEFCRIMLTKVTAMATVIDDIYDV
YGTLDELEIFTHAIQRMEIKAMDELPHYMKLCYLALFNTSSEIAYQVLKEQGINIMPYLT
KSWADLSKSYLQEARWYYSGYTPSLDEYMENAWISVGSLVMVVNAFFLVTNPITKEVLEY
LFSNKYPDIIRWPATIIRLTDDLATSSNEMKRGDVPKSIQCYMKENGASEEEARKHINLM
IKETWKMINTAQHDNSLFCEKFMGCAVNIARTGQTIYQHGDGHGIQNYKIQNRISKLFFE
PITISMP*

Transcript Sequence

Transcript ID

Solyc01g105870.3.1
Transcript Infomation

(E)-beta-ocimene synthase (AHRD V1 **** Q5CD81_CITUN)%3B contains Interpro domain(s) IPR005630 Terpene synthase%2C metal-binding domain
Sequence

TACAAGTGTGTGAAGCTAATACGTAACATCGACTTTCAATGATCCTTAGAAAAGAAAAAC
GTGCCTTTTGATATCCCCTCTCTATATATATGGAACTTTAATTTTATTTGGGATATATAT
ACACAAACAATTATATAGCTAAAAGATTTTCATTTTAAATAGTTATTGAAGAAAAAAATC
AATTTGGGGATCCAAAATTTTGCCATGTCAATATTCTCCACAAGATATTTAGTTACCCCT
TTTTCATCATTTAGCCCACCAAAGGCCTTTGTATCAAAAGCCTGCAGCCTCTCCACTGGA
CAGCCACTTAATTATTCTCCTAATATTTCCACTAATATAATTTCATCTTCAAATGGAATA
ATTAATCCTATTAGGCGTTCAGGGAATTACGAGCCTACCATGTGGAATTATGAATATATT
CAGTCCACACACAATCATCATGTGGGAGAAAAATATATGAAGCGATTTAACGAGCTGAAG
GCAGAAATGAAAAAGCATTTGATGATGATGCTTCATGAGGAATCACAAGAATTAGAGAAG
TTGGAGTTGATTGATAATTTACAAAGGCTTGGAGTGAGTTACCACTTCAAAGATGAAATT
ATTCAAATATTAAGGAGCATACATGATCAAAGTAGTAGTGAAGCCACGTCAGCAAATTCA
TTATATTACACTGCATTGAAATTTAGGATCTTGAGACAACATGGATTTTATATCTCCCAA
GATATATTAAACGATTTCAAGGATGAGCAAGGTCACTTCAAGCAAAGTCTATGTAAAGAT
ACAAAAGGGTTGTTACAATTATACGAAGCTTCATTTCTCTCTACAAAATCAGAAACCTCT
ACTTTATTGGAATCAGCTAATACATTCGCAATGTCACATCTCAAAAACTATTTAAATGGT
GGTGATGAAGAGAATAATTGGATGGTGAAACTAGTGCGCCATGCCCTGGAAGTTCCTTTG
CATTGCATGATGCTAAGAGTTGAGACAAGGTGGTATATTGACATTTATGAAAATATCCCA
AATGCTAATCCTCTCCTGATCGAGCTTGCTAAGTTGGATTTCAATTTTGTGCAAGCAATG
CACCAACAAGAATTAAGAAATCTATCAAGGTGGTGGAAGAAGTCAATGCTTGCAGAAAAA
TTACCATTTGCAAGGGATAGAATTGTTGAAGCTTTCCAATGGATAACTGGCATGATTTTT
GAATCTCAAGAAAACGAATTTTGTCGAATAATGTTGACAAAAGTCACTGCTATGGCTACA
GTTATAGATGACATTTACGATGTTTATGGCACTCTTGACGAACTAGAAATCTTCACTCAT
GCTATTCAAAGAATGGAGATAAAAGCAATGGATGAGCTTCCACATTATATGAAACTATGT
TATCTTGCACTCTTCAATACAAGCAGTGAAATTGCGTACCAAGTTCTTAAAGAGCAAGGG
ATCAACATCATGCCGTACCTTACAAAATCATGGGCAGATTTATCCAAATCTTACTTACAA
GAAGCAAGATGGTACTACAGTGGATATACACCAAGTCTTGATGAATACATGGAAAATGCA
TGGATTTCAGTTGGAAGTTTAGTGATGGTAGTGAATGCATTTTTCTTAGTCACAAATCCA
ATTACCAAAGAGGTATTGGAATACTTATTCTCAAACAAGTACCCTGACATAATTCGTTGG
CCTGCTACGATTATTCGTCTTACCGATGACTTAGCTACATCATCCAATGAAATGAAAAGA
GGTGACGTTCCGAAATCAATTCAGTGTTACATGAAAGAGAATGGGGCAAGTGAAGAAGAG
GCAAGAAAACATATCAATTTAATGATAAAGGAGACATGGAAAATGATAAACACAGCTCAA
CATGATAATTCATTATTTTGTGAAAAGTTCATGGGTTGTGCAGTAAATATTGCAAGAACT
GGACAGACCATATACCAGCATGGAGACGGACACGGAATTCAAAATTATAAAATTCAGAAT
CGCATCTCCAAATTATTTTTTGAGCCCATCACTATTTCCATGCCCTAAAGTTCGCTTCCT
ACTCCAAATTATCATATCATGTAATCATACTTTAGATTTTTATGCATTTCTTTTCGATAT
ATATATATATCTATGGAGGAGCCAAAATTAGTTTGGCTAGAGCGACCATAAGTGATGAAA
ATAAATATATTCTTTGTCC