Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g105720.2.1
CDS Infomation

LOW QUALITY:Peptide upstream ORF protein (AHRD V3.3 *** G7J561_MEDTR)
Sequence

ATGGATTTTGGTTTTGTGTATTGCCCCAAAAGGGGGGAAATCAAGGGGAATCATTTTCCC
GAGTTGAAAATTGGGTTGCATCAAGACGCCGTTTTGATTATTAAGCTACCAGATTCGAGG
GCTTTAAGGATTATGTCACGGTCTTTGTTCTTTGCAATGGTTCTTTTCATATTGCCGTCA
ATTGGGTCCATTTTAAGAGGCTCATTCGATGTAATTGATGATTCTTATGTGAATTCTGAT
GGGAGGGACTTCAATGTGTTGCATAATCTTTTTCGCGATTTGGCAGATGAAGGCCTTGTC
AAGAAGGGGCATAAAGGACTTGTTTTGAGTTCTGAGAATGATCGTTTGATCAAAGATTTG
GAATTGTCGAATGACAATGTGGTTGATTTGGTGCTTGATTCGGATATGGATTACAAGAAT
TCGATTCCAAATGAGACATTCGATTTTGCAATTGCTCAGAATGAATGGAACAGTAAGTTC
ATTGACCGTGTACTCAAGATTGGTGGCATTGTTGTAACTCAACTCAGCAATGATCCTTTA
GCTGAGCTTAAAGCTCTAGCAAACTACAGAATCGTGTATATTCGACGATTTGACAAGACT
TTGGTGGGAGTTAGGAAAACTGGGGTACTAAATGCTGAACTGAATTCACAGAAAAAGGAC
ATTGTTTGTGGAAGCACACCTGAGGCTAAAAAAGTTGCATTGAAAGGATTAGAGGATGTG
TTGCTCGAACCGCCAAAAAGGGCATTGCTGAAATCATTTTCAAGGAAGATGAAGTTTCTT
CCTGAGTTGTTAGGTGATTCTCTTGAGAATTACCCTCGAAGAATCTTCATTTCTGATGAG
AAAAATGGGGTAGCAGAATGGTTTAAGAGGAGCTACCCTGCAAATAATCAAGATTTCGAG
ATTTACAACTTGGATGTTGAAATCCAAGAGTCAGAGCAATCAGGGGATGGAGTAGCCTTA
GTTGGGACAGCAGAATGGTTGAGCAAAAATGTTAAGGAAGAAGACTACGTTGTGATGAAG
GCTGAAGCAGAAGTGGTTGAGGAAATAATCAAGAAGAAAGCAATATGTTTGGTAGATGAG
TTGTTCTTGCACTGCAGAAACCAATTAGAAGAAGTTGGTAATGATGATGATGATGAAGAG
GAAAATGGAAGCCAAAAGAGGGCTTATTGGCAATGTTTGACATTGTATGGGAAGTTAATA
GATGAAGGTATTGCAGTGCACCAATGGTGGAGTTGA

Peptide Sequence

PEP ID

Solyc01g105720.2.1
PEP Infomation

LOW QUALITY:Peptide upstream ORF protein (AHRD V3.3 *** G7J561_MEDTR)
Sequence

MDFGFVYCPKRGEIKGNHFPELKIGLHQDAVLIIKLPDSRALRIMSRSLFFAMVLFILPS
IGSILRGSFDVIDDSYVNSDGRDFNVLHNLFRDLADEGLVKKGHKGLVLSSENDRLIKDL
ELSNDNVVDLVLDSDMDYKNSIPNETFDFAIAQNEWNSKFIDRVLKIGGIVVTQLSNDPL
AELKALANYRIVYIRRFDKTLVGVRKTGVLNAELNSQKKDIVCGSTPEAKKVALKGLEDV
LLEPPKRALLKSFSRKMKFLPELLGDSLENYPRRIFISDEKNGVAEWFKRSYPANNQDFE
IYNLDVEIQESEQSGDGVALVGTAEWLSKNVKEEDYVVMKAEAEVVEEIIKKKAICLVDE
LFLHCRNQLEEVGNDDDDEEENGSQKRAYWQCLTLYGKLIDEGIAVHQWWS*

Transcript Sequence

Transcript ID

Solyc01g105720.2.1
Transcript Infomation

LOW QUALITY:Peptide upstream ORF protein (AHRD V3.3 *** G7J561_MEDTR)
Sequence

GCTTCATATCTTCTTCTTCATCATCCTCTCTTCAACATTTTTTTCTCTTAAAAGACAAAA
AAAAGGTTATTTTTTCCCCTTAATTGTTGATGTTAGTTGAGTTATAGATCATCTAATTTC
ATTTCTGGGTGTACCTAGAAACTCAATTTTTCATGGGGTTTTCTTGACCTTTTTATTGAA
TGCTTCCAACAGAAAAAATCATGGAGGTTGCTAGAATTAGACAATTGTTGCTCCTTTGGA
GTAGAATCAAATCTACCCGTGTTTCTCTTGTGGGTGGCAATCACACCGCCGCTAGGTTTT
GTACTCGCTAAATTCACCTTTCTTCCGTCGCTGGATTTTCCCCTTTCTCTCTCTCTCTCT
CTCTCTCTTCTTGTAGCACAAGGTACGATCAGTTTTTACAGACTCTTCCGATAGGTTTGT
TGTAAAAGCATGGATTTTGGTTTTGTGTATTGCCCCAAAAGGGGGGAAATCAAGGGGAAT
CATTTTCCCGAGTTGAAAATTGGGTTGCATCAAGACGCCGTTTTGATTATTAAGCTACCA
GATTCGAGGGCTTTAAGGATTATGTCACGGTCTTTGTTCTTTGCAATGGTTCTTTTCATA
TTGCCGTCAATTGGGTCCATTTTAAGAGGCTCATTCGATGTAATTGATGATTCTTATGTG
AATTCTGATGGGAGGGACTTCAATGTGTTGCATAATCTTTTTCGCGATTTGGCAGATGAA
GGCCTTGTCAAGAAGGGGCATAAAGGACTTGTTTTGAGTTCTGAGAATGATCGTTTGATC
AAAGATTTGGAATTGTCGAATGACAATGTGGTTGATTTGGTGCTTGATTCGGATATGGAT
TACAAGAATTCGATTCCAAATGAGACATTCGATTTTGCAATTGCTCAGAATGAATGGAAC
AGTAAGTTCATTGACCGTGTACTCAAGATTGGTGGCATTGTTGTAACTCAACTCAGCAAT
GATCCTTTAGCTGAGCTTAAAGCTCTAGCAAACTACAGAATCGTGTATATTCGACGATTT
GACAAGACTTTGGTGGGAGTTAGGAAAACTGGGGTACTAAATGCTGAACTGAATTCACAG
AAAAAGGACATTGTTTGTGGAAGCACACCTGAGGCTAAAAAAGTTGCATTGAAAGGATTA
GAGGATGTGTTGCTCGAACCGCCAAAAAGGGCATTGCTGAAATCATTTTCAAGGAAGATG
AAGTTTCTTCCTGAGTTGTTAGGTGATTCTCTTGAGAATTACCCTCGAAGAATCTTCATT
TCTGATGAGAAAAATGGGGTAGCAGAATGGTTTAAGAGGAGCTACCCTGCAAATAATCAA
GATTTCGAGATTTACAACTTGGATGTTGAAATCCAAGAGTCAGAGCAATCAGGGGATGGA
GTAGCCTTAGTTGGGACAGCAGAATGGTTGAGCAAAAATGTTAAGGAAGAAGACTACGTT
GTGATGAAGGCTGAAGCAGAAGTGGTTGAGGAAATAATCAAGAAGAAAGCAATATGTTTG
GTAGATGAGTTGTTCTTGCACTGCAGAAACCAATTAGAAGAAGTTGGTAATGATGATGAT
GATGAAGAGGAAAATGGAAGCCAAAAGAGGGCTTATTGGCAATGTTTGACATTGTATGGG
AAGTTAATAGATGAAGGTATTGCAGTGCACCAATGGTGGAGTTGAATCTAAGACACTTGA
TTTAGCTTTGTCCTTTATCAGTCTCTTGTTATTGTTGTTCATTTCATGTATCATGTGTTC
AGTGGTCATCAGTGGCTTTGGCTTTCTTGTTTGAGCCATTTGTTGTTTAATTCTACTCTC
TTTCTGTTGGCATGAAGACTGTTGCCTCATTTATTTAATGTTTTTCATCTTCTATCCTTT
TATTGCAAAGTTGGCATCTTTGTCGTTATCTTCATATATTCCTA