Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g105330.3.1
CDS Infomation

Methyl-CpG-binding domain-containing protein 8 (AHRD V3.3 *-* A0A199UGF7_ANACO)
Sequence

ATGGCGACTGTTGCACCGACTTGTGGCCCAAAGTTGGAAACGCTGGCTCACATAGACATC
AGTAAATTTTCCCAATCTGAACTCCACGAACTTTCCCTTTGCTCCGACTCCGCTTATGAT
CTCCGGCGTACTAACGAAGTCGTTATTCCCCAAATTGACCGGTCCCTCTTCAATGAATCC
GCCGGGAGCCGTCGTCAAACCTATTCCCGTCTCCGCCACCAACACCACCGTTCTCGCGTG
CCTGGTCTTCACCCTTCAACTTCACAACCCAAACCCCCGTGTACTTCCGACCCTGAAAAT
CACGCAATTCTTCATTTTCTTAAGTTCTTTATACATAATCCAAATTCCCAATCTCCACCG
CCTCCTCCTATTACACAGCCGGCTACTTCCGGGGTTCAAGAAAAGACCCTACTTTTGATG
AATGAACCTGACAAAAAGAGGAAGAGAGGACGGAAGTCTAAGGATAACAAGAAGCTGAAA
GAGAATGGGGTGGAAATTCTGAATAAAAACGGTGAGGTGGTGGATTTAAACAATTTGGAG
AATAATGGGGATAAATTATACAGTGGAGAATTGGAGAAAAGGACTGTTAGGTTACAGACT
GAAGAAGAGGTACTCGGTTTTGTTAGGGACTTGGACGGACAGTGGTGTAGCAGAAGGAAG
AAGAGGAAATATGTTGATGCTAGTGGATTTGGAGATATATTGCCTATTGGTTGGAAGCTC
TTGCTAGCCCTACGTAGACGGGACGGTCGCGTCTGGGTTTATTGTCGTAGAATTGTAAGC
CCTACTGGTCAGCAGTTCATATCATGCAAAGAGGCTTCATCATACTTGCGGTCCCATTTT
TTGTCTGGTGAAGCAAACCAGCCAACTCAGCAGGTTGATGATACTGTTGCTAAAAGTATG
AGTAACTTCCACAGTGATACCAGTTTGGTTTTGTCAACAGACATCCAAGAAAATCCTCAT
TCTCTTCAAAAAGGTGACATGGCAAAGCATAATGTAGTTGCACATGCAGTTGTACCCAGT
TCATCTACTCTACACCTACATCTGAGTGATGTTTGCTTGATGGAGATGGATAATCTCCCT
GAGGTTAAAGTTCAAGACATTTTTGAATGTTATAAATGTAAATTGACGTTTGAAGAAAAG
AATGCATATTTGCAGCATCTATTCTCATTTCACCAGCGGACCACAAGAAGGTACAGGGTT
GGTCCATCTGTTGGTGATGGGGTCATAATTAGAGATGGAAAATATGAATGCCAATTCTGC
CATAAGGTATTTGAAGAACGGCGTAGTTACAATGGTCATGTAGGAGTCCACGTGAGAAAC
AATGCAAGGGGAACTGTGGATATAGCTGCTGCTGTTGCTGCAGACAAGGGTGTTCAGTCC
CCACATCATGATGGGTTGCTTTCAAGGACATGTAAAATGGATGCTTTAATTGAAATTGCC
CAAAATGCAGTTGTAGAAACTTCTAGTGCTAGACCTGCGACCAAGGACAGTAGCATGCCA
TCTAGTACTTCAACGGACTTGGATGGAAATATGTCTACCAACATTGACCAAGTTGCAAGG
TCAACCACTGATATTGGATTGTCAGATACCAAGGAATTTATGACTGAAACATGTCTTGAA
CAAGGCAGAAATCAGCCTGATTATACCTGCGTGCAAGTGACTAAAGATAAGAGTAGTGAG
ATTTTGGCCAACAAGTTCAATCTGAGAGTGATCTCAACCAATGATTCTGAGCAGCCTGAG
GGTGATGATGCGAAGAAGGCTGGAAGCAACAAGGTAGTGCAGGGCCCGGGAAACAAACAG
ACAAAAGAAAATGATGATGTTCGACCTGAGACCATGGAACTAACTTTTCAGGAAATCGCT
AGTCAGAATGCATTAACTAGCTCTTCAGTCTCTATGGTGCAGTCGTTGCATAATAATTTT
GAGCACTCTGAGGAAGGTGTCGGGAAGAAGGATGGAACTGATAATGTAGCAGTGGGTAAG
GGAAACAGCCTGACTAAAGCAAATGATGTCGAATTAGAAACTATGGAACTGACTTTCCAG
GATGATGCTACTCTGGATGAGTTAACCAATTTCTCGCTGTCTATGGTGCAACCATCTCAT
AGTGCTTTTGAGCATCCTGAGAGTGATGACATGAAGAAGGATGGGAATAACCAGCAAGCA
GTTTGTCCTGGGTACAGCCTGACTAAAGCAAATAATGATTTGGAATCTGAGACTATGGAG
TTCATTCTTCAGCAAAATGCTATTCGAGATGGACTAGCAGGCTTTTCAGAGCCTATGGTG
CAATCATTCCACAACTCTACTGGCATTCTTTCAGGATCTAGTAAGGACAATGACGAAGTT
TCTGCTATTGGTCAGAATCTGGATAATGGAACAGGATTTGAGGAGCTTAGGCTGGATGAG
ATAGACCATTTTGAATACAGCTTTGATGGTGGTCATGAATCTTCATCTTTACCCGCAACT
TCTATTGGATTGGGTAATGATGCAAGGATGAAAGAGGCTTTTGCATCGGTTGGATTTGAT
TCTGGAGGAATCATCTTAAACATGGAAGAATTGAATCAACTTTCAACAGTATGTGTGTGG
TGCAGAGTAGAATTCAAGCTTGAAGCTTATGATACCGAAGCTCATTCAGATTCAATTGGA
TTTATGTGTCCAGACTGCAAGGCTAAAATATCTGGACATCTGGAAAGTGTGTTTCCTTGA

Peptide Sequence

PEP ID

Solyc01g105330.3.1
PEP Infomation

Methyl-CpG-binding domain-containing protein 8 (AHRD V3.3 *-* A0A199UGF7_ANACO)
Sequence

MATVAPTCGPKLETLAHIDISKFSQSELHELSLCSDSAYDLRRTNEVVIPQIDRSLFNES
AGSRRQTYSRLRHQHHRSRVPGLHPSTSQPKPPCTSDPENHAILHFLKFFIHNPNSQSPP
PPPITQPATSGVQEKTLLLMNEPDKKRKRGRKSKDNKKLKENGVEILNKNGEVVDLNNLE
NNGDKLYSGELEKRTVRLQTEEEVLGFVRDLDGQWCSRRKKRKYVDASGFGDILPIGWKL
LLALRRRDGRVWVYCRRIVSPTGQQFISCKEASSYLRSHFLSGEANQPTQQVDDTVAKSM
SNFHSDTSLVLSTDIQENPHSLQKGDMAKHNVVAHAVVPSSSTLHLHLSDVCLMEMDNLP
EVKVQDIFECYKCKLTFEEKNAYLQHLFSFHQRTTRRYRVGPSVGDGVIIRDGKYECQFC
HKVFEERRSYNGHVGVHVRNNARGTVDIAAAVAADKGVQSPHHDGLLSRTCKMDALIEIA
QNAVVETSSARPATKDSSMPSSTSTDLDGNMSTNIDQVARSTTDIGLSDTKEFMTETCLE
QGRNQPDYTCVQVTKDKSSEILANKFNLRVISTNDSEQPEGDDAKKAGSNKVVQGPGNKQ
TKENDDVRPETMELTFQEIASQNALTSSSVSMVQSLHNNFEHSEEGVGKKDGTDNVAVGK
GNSLTKANDVELETMELTFQDDATLDELTNFSLSMVQPSHSAFEHPESDDMKKDGNNQQA
VCPGYSLTKANNDLESETMEFILQQNAIRDGLAGFSEPMVQSFHNSTGILSGSSKDNDEV
SAIGQNLDNGTGFEELRLDEIDHFEYSFDGGHESSSLPATSIGLGNDARMKEAFASVGFD
SGGIILNMEELNQLSTVCVWCRVEFKLEAYDTEAHSDSIGFMCPDCKAKISGHLESVFP*

Transcript Sequence

Transcript ID

Solyc01g105330.3.1
Transcript Infomation

Methyl-CpG-binding domain-containing protein 8 (AHRD V3.3 *-* A0A199UGF7_ANACO)
Sequence

TGGAGTCACCTGTAAGTCGTTCGTAAGAAGCACCACCTTATAGTCCCTGTCGGAATTCTC
ATCGGAAATGGCGACTGTTGCACCGACTTGTGGCCCAAAGTTGGAAACGCTGGCTCACAT
AGACATCAGTAAATTTTCCCAATCTGAACTCCACGAACTTTCCCTTTGCTCCGACTCCGC
TTATGATCTCCGGCGTACTAACGAAGTCGTTATTCCCCAAATTGACCGGTCCCTCTTCAA
TGAATCCGCCGGGAGCCGTCGTCAAACCTATTCCCGTCTCCGCCACCAACACCACCGTTC
TCGCGTGCCTGGTCTTCACCCTTCAACTTCACAACCCAAACCCCCGTGTACTTCCGACCC
TGAAAATCACGCAATTCTTCATTTTCTTAAGTTCTTTATACATAATCCAAATTCCCAATC
TCCACCGCCTCCTCCTATTACACAGCCGGCTACTTCCGGGGTTCAAGAAAAGACCCTACT
TTTGATGAATGAACCTGACAAAAAGAGGAAGAGAGGACGGAAGTCTAAGGATAACAAGAA
GCTGAAAGAGAATGGGGTGGAAATTCTGAATAAAAACGGTGAGGTGGTGGATTTAAACAA
TTTGGAGAATAATGGGGATAAATTATACAGTGGAGAATTGGAGAAAAGGACTGTTAGGTT
ACAGACTGAAGAAGAGGTACTCGGTTTTGTTAGGGACTTGGACGGACAGTGGTGTAGCAG
AAGGAAGAAGAGGAAATATGTTGATGCTAGTGGATTTGGAGATATATTGCCTATTGGTTG
GAAGCTCTTGCTAGCCCTACGTAGACGGGACGGTCGCGTCTGGGTTTATTGTCGTAGAAT
TGTAAGCCCTACTGGTCAGCAGTTCATATCATGCAAAGAGGCTTCATCATACTTGCGGTC
CCATTTTTTGTCTGGTGAAGCAAACCAGCCAACTCAGCAGGTTGATGATACTGTTGCTAA
AAGTATGAGTAACTTCCACAGTGATACCAGTTTGGTTTTGTCAACAGACATCCAAGAAAA
TCCTCATTCTCTTCAAAAAGGTGACATGGCAAAGCATAATGTAGTTGCACATGCAGTTGT
ACCCAGTTCATCTACTCTACACCTACATCTGAGTGATGTTTGCTTGATGGAGATGGATAA
TCTCCCTGAGGTTAAAGTTCAAGACATTTTTGAATGTTATAAATGTAAATTGACGTTTGA
AGAAAAGAATGCATATTTGCAGCATCTATTCTCATTTCACCAGCGGACCACAAGAAGGTA
CAGGGTTGGTCCATCTGTTGGTGATGGGGTCATAATTAGAGATGGAAAATATGAATGCCA
ATTCTGCCATAAGGTATTTGAAGAACGGCGTAGTTACAATGGTCATGTAGGAGTCCACGT
GAGAAACAATGCAAGGGGAACTGTGGATATAGCTGCTGCTGTTGCTGCAGACAAGGGTGT
TCAGTCCCCACATCATGATGGGTTGCTTTCAAGGACATGTAAAATGGATGCTTTAATTGA
AATTGCCCAAAATGCAGTTGTAGAAACTTCTAGTGCTAGACCTGCGACCAAGGACAGTAG
CATGCCATCTAGTACTTCAACGGACTTGGATGGAAATATGTCTACCAACATTGACCAAGT
TGCAAGGTCAACCACTGATATTGGATTGTCAGATACCAAGGAATTTATGACTGAAACATG
TCTTGAACAAGGCAGAAATCAGCCTGATTATACCTGCGTGCAAGTGACTAAAGATAAGAG
TAGTGAGATTTTGGCCAACAAGTTCAATCTGAGAGTGATCTCAACCAATGATTCTGAGCA
GCCTGAGGGTGATGATGCGAAGAAGGCTGGAAGCAACAAGGTAGTGCAGGGCCCGGGAAA
CAAACAGACAAAAGAAAATGATGATGTTCGACCTGAGACCATGGAACTAACTTTTCAGGA
AATCGCTAGTCAGAATGCATTAACTAGCTCTTCAGTCTCTATGGTGCAGTCGTTGCATAA
TAATTTTGAGCACTCTGAGGAAGGTGTCGGGAAGAAGGATGGAACTGATAATGTAGCAGT
GGGTAAGGGAAACAGCCTGACTAAAGCAAATGATGTCGAATTAGAAACTATGGAACTGAC
TTTCCAGGATGATGCTACTCTGGATGAGTTAACCAATTTCTCGCTGTCTATGGTGCAACC
ATCTCATAGTGCTTTTGAGCATCCTGAGAGTGATGACATGAAGAAGGATGGGAATAACCA
GCAAGCAGTTTGTCCTGGGTACAGCCTGACTAAAGCAAATAATGATTTGGAATCTGAGAC
TATGGAGTTCATTCTTCAGCAAAATGCTATTCGAGATGGACTAGCAGGCTTTTCAGAGCC
TATGGTGCAATCATTCCACAACTCTACTGGCATTCTTTCAGGATCTAGTAAGGACAATGA
CGAAGTTTCTGCTATTGGTCAGAATCTGGATAATGGAACAGGATTTGAGGAGCTTAGGCT
GGATGAGATAGACCATTTTGAATACAGCTTTGATGGTGGTCATGAATCTTCATCTTTACC
CGCAACTTCTATTGGATTGGGTAATGATGCAAGGATGAAAGAGGCTTTTGCATCGGTTGG
ATTTGATTCTGGAGGAATCATCTTAAACATGGAAGAATTGAATCAACTTTCAACAGTATG
TGTGTGGTGCAGAGTAGAATTCAAGCTTGAAGCTTATGATACCGAAGCTCATTCAGATTC
AATTGGATTTATGTGTCCAGACTGCAAGGCTAAAATATCTGGACATCTGGAAAGTGTGTT
TCCTTGA