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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g105270.3.1
CDS Infomation

LeTH2tobamovirus multiplication 1 homolog 2
Sequence

ATGGTAAAATCTATAAGCTTTCTTCTTGAATTCGCAAAAGATTACGATGATGGAACACCA
CGAGTTCGCCCCATCTTTGATTGGTTCAATGCGATGATGGAGGTCTCCGATTATGAGAAA
CAAGCCATCTTTTATTCTCTCTCTGCCGCCTATGCCTTAGTCTCATTTGTTGCACTGGTT
TCCACAAGAGGTCCAAGAGGCATGGAAAATGAGTGTAAAGTACAACTCATCCGCATCCAA
TTGCGCCTTTCAGGAATTGGTTGGACAACACAAAAGGTTTTTCACTTGATGAATTTTGTT
GTCTGTGGATTGAGAGCAATATTATTTGGGTTCTACAGCAGCGTGTTCAATCTTAGATCA
AAAGCACTTGAGATGATGCTTCTGGATCTCCCCGGTCTTCTATTCTTCTCCACATACACA
CTATTAGTTCTGTTTTGGGCTGAAATATTCCATCAGGCAAGAAACCTTCCAATCGATAAA
CTTCGACCTGCATATTATGCAGTTAATGCAGTCGTATATTTTATACAGATATGCATATGG
ATCTTCATCGGTGTTGGCCCAGCTTCGGCTGCTGTTGAAACTGCTAAACTTTTTTTCGCA
GTTATTTCATTTACTGCTGCTCTGGGATTTGTTATGTATGGTGGAAGGTTGTTCGCTATG
CTTCGGCGCTTCCCTATTGAATCTAGAGGCCGTCAAAAGAAGCTTCATGAGGTTGGTTTC
GTGACTGGTATTTGCTGCATTTGTTTCATGATCAGATGTGTTATGGTTGCTGTTTCTGCT
TTTAACGGGAACGCTGATGTTGATGTCATTGACCATCCAGTTCTCATTCTCTTCTATTAC
GTGGTGGTGGAGATCTTGCCTTCTGTTTTGGTGCTTTTTATTCTGCGCAAATTACCTCCA
AAACGTGTATCAGAGCAATATCATCCTATCCAATAA

Peptide Sequence

PEP ID

Solyc01g105270.3.1
PEP Infomation

LeTH2tobamovirus multiplication 1 homolog 2
Sequence

MVKSISFLLEFAKDYDDGTPRVRPIFDWFNAMMEVSDYEKQAIFYSLSAAYALVSFVALV
STRGPRGMENECKVQLIRIQLRLSGIGWTTQKVFHLMNFVVCGLRAILFGFYSSVFNLRS
KALEMMLLDLPGLLFFSTYTLLVLFWAEIFHQARNLPIDKLRPAYYAVNAVVYFIQICIW
IFIGVGPASAAVETAKLFFAVISFTAALGFVMYGGRLFAMLRRFPIESRGRQKKLHEVGF
VTGICCICFMIRCVMVAVSAFNGNADVDVIDHPVLILFYYVVVEILPSVLVLFILRKLPP
KRVSEQYHPIQ*

Transcript Sequence

Transcript ID

Solyc01g105270.3.1
Transcript Infomation

LeTH2tobamovirus multiplication 1 homolog 2
Sequence

ATCACTTCACTCTCTACATTTTTCTTCATCTGTAAATCACCATTTTTGTTAGACGTAGTA
GCTATGGTAAAATCTATAAGCTTTCTTCTTGAATTCGCAAAAGATTACGATGATGGAACA
CCACGAGTTCGCCCCATCTTTGATTGGTTCAATGCGATGATGGAGGTCTCCGATTATGAG
AAACAAGCCATCTTTTATTCTCTCTCTGCCGCCTATGCCTTAGTCTCATTTGTTGCACTG
GTTTCCACAAGAGGTCCAAGAGGCATGGAAAATGAGTGTAAAGTACAACTCATCCGCATC
CAATTGCGCCTTTCAGGAATTGGTTGGACAACACAAAAGGTTTTTCACTTGATGAATTTT
GTTGTCTGTGGATTGAGAGCAATATTATTTGGGTTCTACAGCAGCGTGTTCAATCTTAGA
TCAAAAGCACTTGAGATGATGCTTCTGGATCTCCCCGGTCTTCTATTCTTCTCCACATAC
ACACTATTAGTTCTGTTTTGGGCTGAAATATTCCATCAGGCAAGAAACCTTCCAATCGAT
AAACTTCGACCTGCATATTATGCAGTTAATGCAGTCGTATATTTTATACAGATATGCATA
TGGATCTTCATCGGTGTTGGCCCAGCTTCGGCTGCTGTTGAAACTGCTAAACTTTTTTTC
GCAGTTATTTCATTTACTGCTGCTCTGGGATTTGTTATGTATGGTGGAAGGTTGTTCGCT
ATGCTTCGGCGCTTCCCTATTGAATCTAGAGGCCGTCAAAAGAAGCTTCATGAGGTTGGT
TTCGTGACTGGTATTTGCTGCATTTGTTTCATGATCAGATGTGTTATGGTTGCTGTTTCT
GCTTTTAACGGGAACGCTGATGTTGATGTCATTGACCATCCAGTTCTCATTCTCTTCTAT
TACGTGGTGGTGGAGATCTTGCCTTCTGTTTTGGTGCTTTTTATTCTGCGCAAATTACCT
CCAAAACGTGTATCAGAGCAATATCATCCTATCCAATAACTCATAGAAGAGCATCCCTGA
TTTTAGTACTTCACCGTTTTTGTTCAAAGAAGCCCTTGTCATGCCAGCCAAGTTTTTAGT
TCTTATAATATCATTTTTGCTTTTATTGTTTTGGCGCTTGTCTCGAGTGACGTGGAGGAG
TTATAGTTTGATTTCAGTACAGCTCTGTAGAAGTCTTGAATTATAAATTATTCAAAGTGC
ATGTGACTTGTAATCATTTGGATAGAATTAGATGTTCGAAGTTTAAAGGCCTTGGGTTAT
ATTGTGCGTCTACTGATACAACTCATATTTGTTCCTTCTCATGATCATAGGTTTATTTGA
TACTTTCCTAGAACATTTTGAGACCAAGTGACTCGTTATTCTGCGTGTGTCTCTTGTTGG
GCATTTGCATAGGCATTGTCACTGCCGCTGCAACGGAACCCAACAGAAAATAGGAAGGAG
TTGTTTGGTACTTCACTTTTAGCGTGGTGCCGTACCTCCTTTCGGACGATACACCGTTGC
CCAAAAAAACTGTCACCACCAACTCACGTGGCTCCAAGACTTCTTGCATCAGGATGGGTG
ATTGTGCATGATCACTTCCGTTTTTAGAATTTGATTATCCACAGAGAATGTTGTAAAGTT
GTTTCAACAATTTCAGATGATAGATTTTAGGTTTACTTAAAGGGGTAATTGGTAGTTAGT
AGAATTACTTTTTATGAACTTTTCTTTGGATTCTTTGTTCATCTCTATTTTATAATTTAA
TTACTATTCTTGTCGTGCATATTTATTTTTTCATGTTTTACTTATTCAGAATATGGTGGA
TGT