Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g105040.3.1
CDS Infomation

Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V3.3 *** AT3G58520.1)
Sequence

ATGAAATTGTTAGATAAATTTCTATTGTCAACCCTAAAATCCATAGCCACCCAAAACATT
GTTTCCCATTATCACAATCTTCAGCAACATAGAACCATAGTGAAAGTCCGTTTGAAATGG
GTGAAAAACAGAGGTTTGGACCATATAATCGATGTGCAAACGGATCTTAAAGCGGCTTGT
TTACTAAAAGACGCCATTGTGCGTTCACCAGTTGGGTATCTTACTGCTAAGTCGCTTGCT
GATTCCCAAAAACTTCTTGGGCTTACAGTTCCTACACTTAGGTTTATTAGAAGATACCCA
ACTCTTTTTGAGGAGTTTCCTCACCCAAAGTACCAATCTTTGCCTTGTTTTAAGCTTACC
CAGATTGCTAAAATTCTTCATGATCAAGAATTGAAGGTCTTTGAAGATAACCATGCTGAT
TTGGTTGAAAGGCTTTCCAAAGTACTTATGATGACAACCAACAGAATGGTGGCGCTGCAA
TCATTGCATCCTTTAAAATGGGATTTAGGATTGCCTGATGATTTCGATAAGAGATTTCCA
GATCATTTTAGAATAGTTAAGGGAACTAATGGGTTGGCTTGCTTAAAGCTTGTTCAGTGG
CCAGATAAATATGCTGTGTCAGAGTTGCAAAAGATGAATGATGATAGCAGCCCTCCGACG
GGGTATAGGGAATTTAAAAGGGGCAAAGCTGCATTAGAATTTCCCATGAGTTTCCCAAGG
GGATATGGGGCACAGAAAAAGGTCAAGGCGTGGATGGATGAGTTTCAGAAGTTGCCTTAC
ATCTCACCTTACGAGGATTCAAGGGGAATCGACCCTAATAGTGATCTTATGGAAAAGAGA
GTAGTTGGGGTTTTACATGAGTTCTTGAGCTTGACACTATACAAGAAAACAAAGAGAAAT
TACTTGAGGAGCCTGAGAAAGGAATTATACCTTCCAGATAGATTTACTCGAATATTTACT
AGGTATCCAGGAATATTTTACCTCTCTCTCAAGTGCAAGACAACGACTGTGGCATTGAGA
GAAGGGTACCGTCGTGGAAGACTTGTAAATGCACATCCTCTGACACGCCACAGGGATAAG
TTTCACCATGTTATGAGGACTGGGTTAATTTACCGAAGCAAAGGAGTGGACATTTTGCCG
CAGCTGGACAACGTGCTTGATGAAGAAGAGAATGAATTGACTGAGGAAGAAGAGATTGAA
TTGACTGATGAATGCGATGGAACTTCTGATGCAGAGACAGCTAGTGATGAAGACTAG

Peptide Sequence

PEP ID

Solyc01g105040.3.1
PEP Infomation

Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V3.3 *** AT3G58520.1)
Sequence

MKLLDKFLLSTLKSIATQNIVSHYHNLQQHRTIVKVRLKWVKNRGLDHIIDVQTDLKAAC
LLKDAIVRSPVGYLTAKSLADSQKLLGLTVPTLRFIRRYPTLFEEFPHPKYQSLPCFKLT
QIAKILHDQELKVFEDNHADLVERLSKVLMMTTNRMVALQSLHPLKWDLGLPDDFDKRFP
DHFRIVKGTNGLACLKLVQWPDKYAVSELQKMNDDSSPPTGYREFKRGKAALEFPMSFPR
GYGAQKKVKAWMDEFQKLPYISPYEDSRGIDPNSDLMEKRVVGVLHEFLSLTLYKKTKRN
YLRSLRKELYLPDRFTRIFTRYPGIFYLSLKCKTTTVALREGYRRGRLVNAHPLTRHRDK
FHHVMRTGLIYRSKGVDILPQLDNVLDEEENELTEEEEIELTDECDGTSDAETASDED*

Transcript Sequence

Transcript ID

Solyc01g105040.3.1
Transcript Infomation

Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V3.3 *** AT3G58520.1)
Sequence

ATGAAATTGTTAGATAAATTTCTATTGTCAACCCTAAAATCCATAGCCACCCAAAACATT
GTTTCCCATTATCACAATCTTCAGCAACATAGAACCATAGTGAAAGTCCGTTTGAAATGG
GTGAAAAACAGAGGTTTGGACCATATAATCGATGTGCAAACGGATCTTAAAGCGGCTTGT
TTACTAAAAGACGCCATTGTGCGTTCACCAGTTGGGTATCTTACTGCTAAGTCGCTTGCT
GATTCCCAAAAACTTCTTGGGCTTACAGTTCCTACACTTAGGTTTATTAGAAGATACCCA
ACTCTTTTTGAGGAGTTTCCTCACCCAAAGTACCAATCTTTGCCTTGTTTTAAGCTTACC
CAGATTGCTAAAATTCTTCATGATCAAGAATTGAAGGTCTTTGAAGATAACCATGCTGAT
TTGGTTGAAAGGCTTTCCAAAGTACTTATGATGACAACCAACAGAATGGTGGCGCTGCAA
TCATTGCATCCTTTAAAATGGGATTTAGGATTGCCTGATGATTTCGATAAGAGATTTCCA
GATCATTTTAGAATAGTTAAGGGAACTAATGGGTTGGCTTGCTTAAAGCTTGTTCAGTGG
CCAGATAAATATGCTGTGTCAGAGTTGCAAAAGATGAATGATGATAGCAGCCCTCCGACG
GGGTATAGGGAATTTAAAAGGGGCAAAGCTGCATTAGAATTTCCCATGAGTTTCCCAAGG
GGATATGGGGCACAGAAAAAGGTCAAGGCGTGGATGGATGAGTTTCAGAAGTTGCCTTAC
ATCTCACCTTACGAGGATTCAAGGGGAATCGACCCTAATAGTGATCTTATGGAAAAGAGA
GTAGTTGGGGTTTTACATGAGTTCTTGAGCTTGACACTATACAAGAAAACAAAGAGAAAT
TACTTGAGGAGCCTGAGAAAGGAATTATACCTTCCAGATAGATTTACTCGAATATTTACT
AGGTATCCAGGAATATTTTACCTCTCTCTCAAGTGCAAGACAACGACTGTGGCATTGAGA
GAAGGGTACCGTCGTGGAAGACTTGTAAATGCACATCCTCTGACACGCCACAGGGATAAG
TTTCACCATGTTATGAGGACTGGGTTAATTTACCGAAGCAAAGGAGTGGACATTTTGCCG
CAGCTGGACAACGTGCTTGATGAAGAAGAGAATGAATTGACTGAGGAAGAAGAGATTGAA
TTGACTGATGAATGCGATGGAACTTCTGATGCAGAGACAGCTAGTGATGAAGACTAGGAT
CCCCTCAACATAGGAATTTCTATAGAGAAAAAGCTCTTGAGGAACAAGCATTTTACGTGT
AGTTGGTAGCCTATTAAGTGGATTAGGACGCAAAGATATCCCACATATCCAGAACAAGAA
GTGGAACTGTTGACAATAAGTGATACTCTCTCTTGGTCTTGGAAAAAGTTTTAAGAGATC
TACACCTTGTACTTTGTGGTATATACCAAGATAAATAAAATTCTTTATGCTTGTAACCTG
GAGTGCGAGGCTTCAATGAGAACGTCTTTTGCTGTAATAGACAAAGGTTCAGGAAGGCAG
TGGTGGCTGGAGATGCTTTGGCCATGTGAATGGCATGGATCAAGCTGCAAAAAAGATTAG
GAATAGCAAAGATGGAAGGAGTGAGATATGTAGTAGGGGAGGGATGTGCTCTGTAAGGGA
GAGTTCTTGACGGCTACAGGCAGTGAGTAACAGGGCATATGTATTAGTCTATTACTAGGA
AACTTTCTGGCACCTTGATCAGCTTTCTCCCTCCATCTGCCCCCATTAATGTTAAACTAG
GGATTTTTTTTTAATAGATAAGATCATCTGAAGAGTAGTTCTATGAGATTTTTGGTTTCT
CTCTCTTGCCAAGGCTAAATGAAATGGTTCTCAATGAATGCATATTACCTATATCTGTGA
GCTAGGGTACCTTTGTGTGAATTGGTATGATAATCCTTATTCTGATTGTATGAGCTTCTG
GTCATATAAACCAGAAGGCAGCAACTCACTGAAAATGCCACCTTCTTGGTTGAGTTATCT
TCTTGTGAAGGTTTCTGCTGTTATGATTTATGATCATATTTTTATTTGTGACTGTAAATT
ATACTTATCAGTGAACTAGGTATTCAAATGTTTGAAGTCACTGTTCTTGAATCATTTGAT
TAGAGTTTTAACTACCATATCTCCGCCTCTGCATTGTTACAACTGTTACACTGTCCTGCT
TGGGCCAGACCAATATTAAATATTTTCTTGAAGCATATTAGATTATGTAAGATCATAAAC
TGTATCAAGGGGAGATCTTGAATTTTCTAAAGGGGACAACCAAATTTTGATTTCTTCTTT
CTACATCCAGTGACTTTTTACAATGAAATGTTTAATACGAAACCCCTTACAAACCAAGAG
CTCCCAGGGGTGTCTTCCCTTGCCCAGCCTCAAAATAGAAAATTAACATGGCTAACATAG
CAAGTCTAGCATGCTTGATCTCAGCAACCTTTAATCTCTCAAGCTTCTCTGTGTCAGGGA
CGTAAACTCCATTGTTAAGTGTACCAGCTAATGCCAGAGGATCGAAGAATTTGCCACCGG
GATAACCCTGTTCGCCTGTGAAGTTGGCGAAGTTCTCAGCAGTCTTGGACCATGGGGTGG
CCCATTCTACAGACTGAGAGTCAGGGTCGAAGAAGTCGACCCATCTTTTGCTCTCAACCC
ACCCCATGAGGATAAGTTGTGTACCAAGAAGTGTGCCAAAAGAGAAAGGTGCAATAGCGC
CAGGGTCAGCACCAGCCTCAAACCATGGAATGCCACTCCATGCTTGACCAACAAAGATGC
CCAATACCGCAGCCATTGCCCATCTGCCATGAATGAGCTCAGCTTCTCTGTACCATTTCA
AGAATGCAGGGTCCTTTCCTAGACCAAGTGGATCAAAACCATAGTCACCAGGTAGCCTGC
AAGTTCAAATATAGTTATGCCTTTGCAAAAGAACGAAACAGGGGAAAGGAGCAGAGACGA
GTCTAGATCAAGTTCAGGGTTCAATCTTTCTGCTCGAACCACATATACATGATCTGAAAA
AATACATGAATTCTGAATCCTAGATTCATCTCTAGGGGATAGGTGTTGAGGGTTGGAGAT
ATAAAGTGAACTTACGAGCCATCGAGCCACTCAGGGTCAACCAGATTGCCACCACCTCTT
ACAGCAGGAATCCAAGATTTCTTTGCAGCAGCAGCCAGCACAGTGAACCTCTTGGGAGTG
GCAGCACCGCCAACTCTGGCAGCAAGGGGAGCAGCCAACAAGGCCTGACTTTTGTTGCCA
CCAGTCAAGAAAGAGGAGCTCAAACCATTCAGCACTGCAGCAGATGTTGTAGCCATGTTT
GTTTTGTATATGTTTAAGAATGGAAATGATAGTAATATGCAAAGATATGGATGGTTGTTT
CTTGTGTCTCTTCTATGAATGAAGTAGTGAGATATAAGTTTATAAGATCA