Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g105020.3.1
CDS Infomation	Protein phosphatase 2C family protein (AHRD V3.3 - AT4G33500.1)
Sequence	ATGGCTGATTCTTTGTGCAAGTTCTTGGATGGTCGGTGCATAACAGGTTCTCAATTCTTT GCCACCTATTTTTCTGCCCAAAAACCCTTCCTTTTCCCAACTCTTGTCAGAAGAAAAAGA AGAAGAAAATCACTTCACATTGCTTTCTGCTCCACACCCATTTCCACAAATCTTGATGTT GTCTCTACCCATGAGCATTCTGATGGCACTTTACTGTTTCGGTTTGGGGACCCAAGAGAG ATAGCGAAAGAGGATGAATTGGAGGAGCCCCTTTTGGATAGTGAGGAGGAATTTAGTGTG GTGAAGGTTTTAGATGGTGATAATGAGAGAGAAGTCATTGTCAAGAAAGTAGAGAGGGAA GCCAGGGGCGAGGCTGTGACTGTGGTCACTGATGCTGGTGTCTCTGAATCAGTAGTAATT GGCAATGGAAGGAATGATCTTGTCGAAGTAGAGACTGGATTGAGTAAAAATTTTCTTGGA GATTCTGCGGTTGAAATTGGTTCGTTTTCACCTGAAGGAATTCAAAATGAATCTGTAGCT GAAGTCGATATTGAGAATGCAGTACATGTTGAGGAGATTTTCGAAAAGAAAGATGATAGT GAAGCTTCAGTTCCACCACCACCAGAGAATTCTATTACTTCTTTGGAAGTTGAGGAAGAA ATGATGGGTCAAACAAGTGATGAATCATTTGAAGAATTGGATGATGACAAATCACTTGTT TTAAGTTCACCTACAGCAATGCCTGTTTATTCTGACTTAGTAAACACTAAGGAAATTGAA GAATTTGAGGGAGAAGGTTCAAGTCAATTGACAGAGAATGATGGTGACAAGGATTGCTGT TATGATTCAACTCATTCGAAGGAAAATGGTGCTGCTTCTGCTGATATTGAGGCAGCGCAC AATGATATTGAGATTGTACAACAGATAGAACAAATATCTGAAAATATTGGAAGTATATTG GAAGGGTCCACGGAGAGTGTTCCAGAAGGAATTAATCTGGGGAATGCCAAAACTGTTGCT GACGAAATTAGTCCAGAGAATGCTCCCGAGGGAATAAATCTGGGGAATACTGAAACTGTT GGTGACGAAATTAGTCCAGACAATGCTCCGGAGGGAATTAATCTGGGGAATACTGAAGCA GTTGTTGACGAAATAAGTTCAGACAATGCTCCTGAGGGAATTGATAAGGGGAATACTGAA ACTGTTGTTGACGAAATTAGTTCAGACAATTCTCCTGAGGGAAATGATCAGGGGAATACT GAAACTGTTGTTGACGAAATTAGTCTAGAGAATTCTCTCGATGGAATTGATCTGGGGAAT ACTGAAACTGTTGTTGACGAAATTAGTCTAGAGAAGTCTCTCGATGGAATTGATCTGGGG AACACTGAAACTGTTGTTGACGAAATTAGTCTAGAGAATTCTCTCAATGGAATTGATCTG GGGAATACTGAAACTGTTGTTGACGAAATTAGTCTAGAGAATTCTCTCGATGGAATTGAT CTGGGGAATACTGGAACTGTTGTTGACGAAATTAGTCTACAGAATTCTCTCGATGGAATT GATCTGGGGAATACTGAAACTGTTGTTGACGAAATTAATCTAGAGAATTCTCTCGATGGA ATTGATCTGGGGAATACTGAAACTGTTGTTGACGAAATTAGTCTAAAGAATTCTCTCGAT GGAATTGATCTGGGGAATACTGAAACTGTTGTTGAAGAAATTAGTTTAGAGAATTTTCTC GATGGAATTGATCTGGGGAATACTGAAACTGTTATTGACGAAATTAGTCTAGAGAATTCT CTCGATGGAATTGATCTGGGGAATACTGAAACTGTTGTTGACGAAATTAGTCTAGAGAAT GCTCCTGATGGACTTGATCTGGGGAATTCTGAAACTTTTGTTGACAAAATTAGCCCAGAG AATGCTCTAGGGGGAATTAATCTGGGGAATACTGAAACTGTTGTTGATGAAATTAGTCCA GAGAATGTTGATATTAGGCATTTGTCTATGGATGCTGAAGACCAGAGTATCGAAGTCCTT AATTTTGAAAATGATGAACAAACCGAGCTGAGTAATTTGTCTGTAGATACAGAAGATCAG GCTTCCCGAAATAGTACCTTCAAGGATAGTGATGTGACTGAAGTAATGCCTGATTCTCCT AAGCTGGAGGCTGAACCAGTTTTTGATGAGGAAGTTGATCACAACATAATATCAGAGTCT AATGAAAGTGAAAGTCCATTGCCGTCAGATGAAAATTTGCCTAGCTTATCCTTGGAAGAA GAAAGAAAAGAAGATGTAGAAAACAATGAGATCATGGAAGTGTATGGTCATGAAGTGGTT GAGGATAAATCTTCAGAAGTCTTAGTCAGCAGCAAGGAAGCTACGCCAGCAGCAGCAGAA CTAATTCTATCTTCTGGTGCTACTTTATTGCAATATCCCTCCAAGGCGTTCGCAGGTGGA CATGAAGCATATTTTATTGCTTGTGGGAAGTGGCTAGGGGTAGCCGATGCAGTTGGTTCC TGGTCATTGGAAGGGAGTGATCCAGGAGTATATGCCCAAGAACTCATGCAAAATAGTCAA TCCATTGTTTCTCAGTGCGACAAGGATTCAATAAATGACCCTAAGCAAGTCCTTAATCTG AGCGTCTCAAAAACAGATTCCCCTGGATCTTCAACAGTCTTGATTGCTCATTTTGATGGA AAGGCTCTTCATGTGGCTAATATTGGCGACTCTGGATTTATCATAGTAAGGAATGGCAAT GTTTATAGGAAGTCATCACCCATGCTTCATGAATTCAATTTGCCCATACAAATTGAGAAA GGCGATGATCCATATCAACTTCTGGAGGAATACAAGATAGAGTTAGATGAGGGGGACATC ATTGTTACTGCAACGGATGCACTTTTTGACAACTTATATGATCAAGAAATAGTATCAATC GCCTCAAGGTCACTGGAAGCCGACAAAAGTCCTCAGGAGATTGCGGAGATTTTGGCAACA AGAGTGCAACAAGTGGGTAGTTCTGCTTCGGGCAGAAGTCCATTTGCTGATGCAGCTCAA GCAGCCGGATATGTTGGGTATACTGGTGGCAAGCGCGATGATGTGGCTGCCATTGTATCA GTAGTTCAAAAGGTAATCGTGTCAAATAACAACTAG

Peptide Sequence

PEP ID	Solyc01g105020.3.1
PEP Infomation	Protein phosphatase 2C family protein (AHRD V3.3 - AT4G33500.1)
Sequence	MADSLCKFLDGRCITGSQFFATYFSAQKPFLFPTLVRRKRRRKSLHIAFCSTPISTNLDV VSTHEHSDGTLLFRFGDPREIAKEDELEEPLLDSEEEFSVVKVLDGDNEREVIVKKVERE ARGEAVTVVTDAGVSESVVIGNGRNDLVEVETGLSKNFLGDSAVEIGSFSPEGIQNESVA EVDIENAVHVEEIFEKKDDSEASVPPPPENSITSLEVEEEMMGQTSDESFEELDDDKSLV LSSPTAMPVYSDLVNTKEIEEFEGEGSSQLTENDGDKDCCYDSTHSKENGAASADIEAAH NDIEIVQQIEQISENIGSILEGSTESVPEGINLGNAKTVADEISPENAPEGINLGNTETV GDEISPDNAPEGINLGNTEAVVDEISSDNAPEGIDKGNTETVVDEISSDNSPEGNDQGNT ETVVDEISLENSLDGIDLGNTETVVDEISLEKSLDGIDLGNTETVVDEISLENSLNGIDL GNTETVVDEISLENSLDGIDLGNTGTVVDEISLQNSLDGIDLGNTETVVDEINLENSLDG IDLGNTETVVDEISLKNSLDGIDLGNTETVVEEISLENFLDGIDLGNTETVIDEISLENS LDGIDLGNTETVVDEISLENAPDGLDLGNSETFVDKISPENALGGINLGNTETVVDEISP ENVDIRHLSMDAEDQSIEVLNFENDEQTELSNLSVDTEDQASRNSTFKDSDVTEVMPDSP KLEAEPVFDEEVDHNIISESNESESPLPSDENLPSLSLEEERKEDVENNEIMEVYGHEVV EDKSSEVLVSSKEATPAAAELILSSGATLLQYPSKAFAGGHEAYFIACGKWLGVADAVGS WSLEGSDPGVYAQELMQNSQSIVSQCDKDSINDPKQVLNLSVSKTDSPGSSTVLIAHFDG KALHVANIGDSGFIIVRNGNVYRKSSPMLHEFNLPIQIEKGDDPYQLLEEYKIELDEGDI IVTATDALFDNLYDQEIVSIASRSLEADKSPQEIAEILATRVQQVGSSASGRSPFADAAQ AAGYVGYTGGKRDDVAAIVSVVQKVIVSNNN*

Transcript Sequence

Transcript ID	Solyc01g105020.3.1
Transcript Infomation	Protein phosphatase 2C family protein (AHRD V3.3 - AT4G33500.1)
Sequence	TGCGGCCCATATAGCAATTGAGAATAAGTGGTGCTGTTTAAGAGTTATTAGGTAGCCAAA AACCCATTTCCCGGGTAAAACCAAACAGAAAATAATGATCATCAATTCCCAAGAAAAGAA AAGACATGAACTTCTATCCACATCTTCAACTCAAATAATCTTTAAAAATTGTTAGAGAAG TTGTAGTTATGGCTGATTCTTTGTGCAAGTTCTTGGATGGTCGGTGCATAACAGGTTCTC AATTCTTTGCCACCTATTTTTCTGCCCAAAAACCCTTCCTTTTCCCAACTCTTGTCAGAA GAAAAAGAAGAAGAAAATCACTTCACATTGCTTTCTGCTCCACACCCATTTCCACAAATC TTGATGTTGTCTCTACCCATGAGCATTCTGATGGCACTTTACTGTTTCGGTTTGGGGACC CAAGAGAGATAGCGAAAGAGGATGAATTGGAGGAGCCCCTTTTGGATAGTGAGGAGGAAT TTAGTGTGGTGAAGGTTTTAGATGGTGATAATGAGAGAGAAGTCATTGTCAAGAAAGTAG AGAGGGAAGCCAGGGGCGAGGCTGTGACTGTGGTCACTGATGCTGGTGTCTCTGAATCAG TAGTAATTGGCAATGGAAGGAATGATCTTGTCGAAGTAGAGACTGGATTGAGTAAAAATT TTCTTGGAGATTCTGCGGTTGAAATTGGTTCGTTTTCACCTGAAGGAATTCAAAATGAAT CTGTAGCTGAAGTCGATATTGAGAATGCAGTACATGTTGAGGAGATTTTCGAAAAGAAAG ATGATAGTGAAGCTTCAGTTCCACCACCACCAGAGAATTCTATTACTTCTTTGGAAGTTG AGGAAGAAATGATGGGTCAAACAAGTGATGAATCATTTGAAGAATTGGATGATGACAAAT CACTTGTTTTAAGTTCACCTACAGCAATGCCTGTTTATTCTGACTTAGTAAACACTAAGG AAATTGAAGAATTTGAGGGAGAAGGTTCAAGTCAATTGACAGAGAATGATGGTGACAAGG ATTGCTGTTATGATTCAACTCATTCGAAGGAAAATGGTGCTGCTTCTGCTGATATTGAGG CAGCGCACAATGATATTGAGATTGTACAACAGATAGAACAAATATCTGAAAATATTGGAA GTATATTGGAAGGGTCCACGGAGAGTGTTCCAGAAGGAATTAATCTGGGGAATGCCAAAA CTGTTGCTGACGAAATTAGTCCAGAGAATGCTCCCGAGGGAATAAATCTGGGGAATACTG AAACTGTTGGTGACGAAATTAGTCCAGACAATGCTCCGGAGGGAATTAATCTGGGGAATA CTGAAGCAGTTGTTGACGAAATAAGTTCAGACAATGCTCCTGAGGGAATTGATAAGGGGA ATACTGAAACTGTTGTTGACGAAATTAGTTCAGACAATTCTCCTGAGGGAAATGATCAGG GGAATACTGAAACTGTTGTTGACGAAATTAGTCTAGAGAATTCTCTCGATGGAATTGATC TGGGGAATACTGAAACTGTTGTTGACGAAATTAGTCTAGAGAAGTCTCTCGATGGAATTG ATCTGGGGAACACTGAAACTGTTGTTGACGAAATTAGTCTAGAGAATTCTCTCAATGGAA TTGATCTGGGGAATACTGAAACTGTTGTTGACGAAATTAGTCTAGAGAATTCTCTCGATG GAATTGATCTGGGGAATACTGGAACTGTTGTTGACGAAATTAGTCTACAGAATTCTCTCG ATGGAATTGATCTGGGGAATACTGAAACTGTTGTTGACGAAATTAATCTAGAGAATTCTC TCGATGGAATTGATCTGGGGAATACTGAAACTGTTGTTGACGAAATTAGTCTAAAGAATT CTCTCGATGGAATTGATCTGGGGAATACTGAAACTGTTGTTGAAGAAATTAGTTTAGAGA ATTTTCTCGATGGAATTGATCTGGGGAATACTGAAACTGTTATTGACGAAATTAGTCTAG AGAATTCTCTCGATGGAATTGATCTGGGGAATACTGAAACTGTTGTTGACGAAATTAGTC TAGAGAATGCTCCTGATGGACTTGATCTGGGGAATTCTGAAACTTTTGTTGACAAAATTA GCCCAGAGAATGCTCTAGGGGGAATTAATCTGGGGAATACTGAAACTGTTGTTGATGAAA TTAGTCCAGAGAATGTTGATATTAGGCATTTGTCTATGGATGCTGAAGACCAGAGTATCG AAGTCCTTAATTTTGAAAATGATGAACAAACCGAGCTGAGTAATTTGTCTGTAGATACAG AAGATCAGGCTTCCCGAAATAGTACCTTCAAGGATAGTGATGTGACTGAAGTAATGCCTG ATTCTCCTAAGCTGGAGGCTGAACCAGTTTTTGATGAGGAAGTTGATCACAACATAATAT CAGAGTCTAATGAAAGTGAAAGTCCATTGCCGTCAGATGAAAATTTGCCTAGCTTATCCT TGGAAGAAGAAAGAAAAGAAGATGTAGAAAACAATGAGATCATGGAAGTGTATGGTCATG AAGTGGTTGAGGATAAATCTTCAGAAGTCTTAGTCAGCAGCAAGGAAGCTACGCCAGCAG CAGCAGAACTAATTCTATCTTCTGGTGCTACTTTATTGCAATATCCCTCCAAGGCGTTCG CAGGTGGACATGAAGCATATTTTATTGCTTGTGGGAAGTGGCTAGGGGTAGCCGATGCAG TTGGTTCCTGGTCATTGGAAGGGAGTGATCCAGGAGTATATGCCCAAGAACTCATGCAAA ATAGTCAATCCATTGTTTCTCAGTGCGACAAGGATTCAATAAATGACCCTAAGCAAGTCC TTAATCTGAGCGTCTCAAAAACAGATTCCCCTGGATCTTCAACAGTCTTGATTGCTCATT TTGATGGAAAGGCTCTTCATGTGGCTAATATTGGCGACTCTGGATTTATCATAGTAAGGA ATGGCAATGTTTATAGGAAGTCATCACCCATGCTTCATGAATTCAATTTGCCCATACAAA TTGAGAAAGGCGATGATCCATATCAACTTCTGGAGGAATACAAGATAGAGTTAGATGAGG GGGACATCATTGTTACTGCAACGGATGCACTTTTTGACAACTTATATGATCAAGAAATAG TATCAATCGCCTCAAGGTCACTGGAAGCCGACAAAAGTCCTCAGGAGATTGCGGAGATTT TGGCAACAAGAGTGCAACAAGTGGGTAGTTCTGCTTCGGGCAGAAGTCCATTTGCTGATG CAGCTCAAGCAGCCGGATATGTTGGGTATACTGGTGGCAAGCGCGATGATGTGGCTGCCA TTGTATCAGTAGTTCAAAAGGTAATCGTGTCAAATAACAACTAGTAACACCGCGGTATAT ACATACATGTATATACCTAGTTCCACGTAAATTCTTTAATGTTTCCCTTCCACTTTGTAA GCAGTTTTTTGATGTCTCAAAGAAAGTAACTGTAACATCTATGTTGATGGGGTTCAGTAA GCTTCATTGAAATGTAAATTTATGGCATCTGATTCCTATTTCTACACCATCATGGCTGCT CTAGAATGATTCTAATTAATCATTATGTGTTCTTAACGAGATCCTTCCCAAT