Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g104980.3.1
CDS Infomation

F-box/kelch-repeat protein (AHRD V3.3 *** W9S379_9ROSA)
Sequence

ATGGGTGGCATATTGAGTCGGAGTAACCACAACTCTAATGTGGGGGATCTTATTGAGGGC
TCCCAAAGTGCATCATGCAAGAGACAAAGGACATCAGATAGCTTCTGGGAGCATAGCCCA
CGATTAATTCCAAGCCTGCCTGATGAAATATCTATTCAAATCCTCGCCAGACTTCCTAGA
ACACACCACTTAAATGCAAAATTAGTTTCGGCGAGCTGGAAAGCTGCTATTATGAGTCCA
GAACTTTATAGGTGTAGAAAAGAACTTGGAACAACCGAAGAGTGGCTCTATCTTTTGACA
AAGACTGAAGGTGATAAGTTTTTGTGGTATGCTTTTGATCCGATCTCCATGAGATGGCAA
AAGTTGCCACCAATGCCGGCAATTGCGGTCAATGATGAACCTAGAAGTGGTTTATCTGGA
CTTCGGGCATGGAACATGGCAGGTTCAAGTATGAGAATTGCTGATGCCATAAGGGGTTGG
CTTGGAAGGAAAAGTGCTCTGGATCAAGTTCCATTTTGTGGTTGTGCTATTGGAGCTGTC
GATGGATGCCTCTATGCCCTTGGGGGATTCTTCAGAGCTGCAGCCATGAGATCTGTCTGG
CGATATGACCCCATTGTAAATGCTTGGAATGAAGTAAGTCCTATGTCTACTGCAAGAGCT
TATTGCAAGACAGGTGTCTTGAATGGAAAGCTTTATGTAGTAGGAGGTGTTACTCGGGAT
CGTGGGGGACTTACTCCCCTTCAATCTGCAGAAGTATTTAATCCTCATACTGGTATCTGG
TCTGAAGTCCCAAGCATGCCGTTTTCAAAAGCTCAGATGCTACCCACTGCTTTTCTAGCT
GATCTACTCAAGCCTATAGCTACAGGGATGACATCTTATCGCGGTAAACTATATGTTCCT
CAAAGTTTGTATTGCTGGCCTTTTTTTGTTGATGTTGGAGGAGAGGTTTACGATCCCGAA
ACAAATGCATGGATTGAAATGCCACTTGGCATGGGAGATGGCTGGCCTGCTAGGCAGGCA
GGAACAAAGTTGAGTGTCACTGTTGAAGGAGAGTTGTATGCACTGGATCCCTCTAGTACG
CTAGATAGTGCTAGAATAAAAGTTTATGATCATCAAAATGACACCTGGAAGGTGATTGAA
GGAGATATACCTATTAATGACAATTCAGAGTCTCCTTATCTTCTTGCTGGTTTTCTTGGA
AAGCTCCATGTGATCACTAAAGATGCAAATCACAATATCATGGTCATGCAGGCTGATAAG
CAAAATCATTCAGCTCCTTCTCCATCAACCTCAGCAAACTCTTTACAAAAAAACCTACAC
GAAGTTCCAGAGCCGGTTTTAGGATCTGAAGCAAATATGTGGAGAGTTGTTGCTTTGAGA
AGCGGTGGATCTGCAGAGCTGGAATGGAATCTAACTGTGAATTAA

Peptide Sequence

PEP ID

Solyc01g104980.3.1
PEP Infomation

F-box/kelch-repeat protein (AHRD V3.3 *** W9S379_9ROSA)
Sequence

MGGILSRSNHNSNVGDLIEGSQSASCKRQRTSDSFWEHSPRLIPSLPDEISIQILARLPR
THHLNAKLVSASWKAAIMSPELYRCRKELGTTEEWLYLLTKTEGDKFLWYAFDPISMRWQ
KLPPMPAIAVNDEPRSGLSGLRAWNMAGSSMRIADAIRGWLGRKSALDQVPFCGCAIGAV
DGCLYALGGFFRAAAMRSVWRYDPIVNAWNEVSPMSTARAYCKTGVLNGKLYVVGGVTRD
RGGLTPLQSAEVFNPHTGIWSEVPSMPFSKAQMLPTAFLADLLKPIATGMTSYRGKLYVP
QSLYCWPFFVDVGGEVYDPETNAWIEMPLGMGDGWPARQAGTKLSVTVEGELYALDPSST
LDSARIKVYDHQNDTWKVIEGDIPINDNSESPYLLAGFLGKLHVITKDANHNIMVMQADK
QNHSAPSPSTSANSLQKNLHEVPEPVLGSEANMWRVVALRSGGSAELEWNLTVN*

Transcript Sequence

Transcript ID

Solyc01g104980.3.1
Transcript Infomation

F-box/kelch-repeat protein (AHRD V3.3 *** W9S379_9ROSA)
Sequence

ATGGGTGGCATATTGAGTCGGAGTAACCACAACTCTAATGTGGGGGATCTTATTGAGGGC
TCCCAAAGTGCATCATGCAAGAGACAAAGGACATCAGATAGCTTCTGGGAGCATAGCCCA
CGATTAATTCCAAGCCTGCCTGATGAAATATCTATTCAAATCCTCGCCAGACTTCCTAGA
ACACACCACTTAAATGCAAAATTAGTTTCGGCGAGCTGGAAAGCTGCTATTATGAGTCCA
GAACTTTATAGGTGTAGAAAAGAACTTGGAACAACCGAAGAGTGGCTCTATCTTTTGACA
AAGACTGAAGGTGATAAGTTTTTGTGGTATGCTTTTGATCCGATCTCCATGAGATGGCAA
AAGTTGCCACCAATGCCGGCAATTGCGGTCAATGATGAACCTAGAAGTGGTTTATCTGGA
CTTCGGGCATGGAACATGGCAGGTTCAAGTATGAGAATTGCTGATGCCATAAGGGGTTGG
CTTGGAAGGAAAAGTGCTCTGGATCAAGTTCCATTTTGTGGTTGTGCTATTGGAGCTGTC
GATGGATGCCTCTATGCCCTTGGGGGATTCTTCAGAGCTGCAGCCATGAGATCTGTCTGG
CGATATGACCCCATTGTAAATGCTTGGAATGAAGTAAGTCCTATGTCTACTGCAAGAGCT
TATTGCAAGACAGGTGTCTTGAATGGAAAGCTTTATGTAGTAGGAGGTGTTACTCGGGAT
CGTGGGGGACTTACTCCCCTTCAATCTGCAGAAGTATTTAATCCTCATACTGGTATCTGG
TCTGAAGTCCCAAGCATGCCGTTTTCAAAAGCTCAGATGCTACCCACTGCTTTTCTAGCT
GATCTACTCAAGCCTATAGCTACAGGGATGACATCTTATCGCGGTAAACTATATGTTCCT
CAAAGTTTGTATTGCTGGCCTTTTTTTGTTGATGTTGGAGGAGAGGTTTACGATCCCGAA
ACAAATGCATGGATTGAAATGCCACTTGGCATGGGAGATGGCTGGCCTGCTAGGCAGGCA
GGAACAAAGTTGAGTGTCACTGTTGAAGGAGAGTTGTATGCACTGGATCCCTCTAGTACG
CTAGATAGTGCTAGAATAAAAGTTTATGATCATCAAAATGACACCTGGAAGGTGATTGAA
GGAGATATACCTATTAATGACAATTCAGAGTCTCCTTATCTTCTTGCTGGTTTTCTTGGA
AAGCTCCATGTGATCACTAAAGATGCAAATCACAATATCATGGTCATGCAGGCTGATAAG
CAAAATCATTCAGCTCCTTCTCCATCAACCTCAGCAAACTCTTTACAAAAAAACCTACAC
GAAGTTCCAGAGCCGGTTTTAGGATCTGAAGCAAATATGTGGAGAGTTGTTGCTTTGAGA
AGCGGTGGATCTGCAGAGCTGGAATGGAATCTAACTGTGAATTAACACAAAGGAAAGAAA
TATGTGGTGCAGAATATTGTGATTGTGGTTGCATTGCACACTCAAGACTGTTTTATGAAC
TATATATGTAGAATTATTTGTAATGATTGATATATTGATATCATTGTTCTATTTGCCTTA
ATGATACACAGATGGTTTGTTGAACTCTGATGTTTTCTGCATATGAGATATCTGAACCAT
TGCAAGTTTTACTCCCCCTTACCTGACATTCACCAAGACCTTTTCTTTGAAACACACAAC
TCACCAGGTGACTAGAGTAACGTGTTTATTTGCCGAACAAACAATTACTATCTGATGCAT
CCATAAAGAAATATTACATTTGTGCTTCCACGCCCATTCTTGCTGTGGATTAACTTCCAC
ATTCAATCCTTTAATTGACCCAGAGTAAACTATAGACATTCAGATGTCATCAAAATTCCT
GACATACAATATAATCTTAAAAAGAAAAAGAGAGTATGAAAAAGAAGGAAAATAAATATG
CACAAAGATGAAAATTGGCTATTACAAATACAAAGGATTTCCCTTGAAAGAGTCCTATAT
GTGCTGCTGGAAGAATAGCTGAAAGATCATCTTGGCCCTGATAACTCATCGGGTCGTAGA
TTATAAGTGGAATCTGCAATAATCCAATCAGTGTGAGGATGGTGAGCATGGTTGAAGTCT
TGGCGGAACATCTCTTCCTTCTGCCATTCTTCCCACCTCTCGGCAAGGCCATCACCTTCA
AGCATTCTGACCACTTCCGACATCTTTGGACGTTCCATAGGAGAGCTCTGTGTGCAGAGT
AGAGCTACCTGAATAAGCTGTTTCACC