Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g104540.3.1
CDS Infomation

C-jun-amino-terminal kinase-interacting protein 3, putative (AHRD V3.3 *** A0A061FHN5_THECC)
Sequence

ATGGAAACAAGTGAACCTACATTAGCCCCACAATGGTTAAGGAGCGGTAAACATGTGTCA
AGCTTCGGCGCCGCATCATCCCGGTTGCATCCAGATGATGCAGCCCCATCAAAACATGCA
CACAAGAGATCACTGTCAGTGAATACGGACAATAAAGAGTGGAGGCGTCCTGCTTCATCT
GATCGAGCCATCTCTTCACGGACTCGGTGGAGCTCCAACAGTAGTAATTCCCCTAACTTT
CAATCTTACAATAATTTTAGAAATCATCACAGAGACATGGATAAAGACATTAACAAGTAC
CGGGAGTCATCAACTTTAAGAAATCATAGGTCTAGGGACTTTTCCGATACTTCCAAGAAA
CATCACTTGGAAATATTTGAGGAAGGGTTACAGTCACCTTCAATGACTTCTGGTAGAATT
AGTGAGAAATGGCCTAGGAATTTGAGCAATGCTGGTAAGATCAAACTAACTGACAACAAT
GGCGTGCTTGCGGATAAAGCAATTGAATGTGGCATCCGACCCTTAGTAACTGAAAAACGA
CAAACATCACCTGGCCTTGGAAGTGTCGGATCTCCTGGTTTGGGTACTAGGACTCAGGGT
ATACCAACAAGTCCGTCAGGCAGTACTGTCAACAAGTTGGCATCTGCATTAGCAGTTACT
ACAGCAGTTGCCGGTAACGATAACTCTGGTCTATCTTCCATGAAACGAGCTGCCTCTTCT
GGACCTTCTTCTCCAATTTTTAGCAAGTCAAGTGGCAGATGTCTTAATATGGCTGAAACT
GTCGCTAAGGGTCTTCCTTGTGCTCAGACTATTTCCCAGGTGTCCCAAGCAAATCACCGA
CTTGAAGAGCTTGCTATGAAGCAATCTAGGCAATTGATACCACTGGTGGCTAAGGCCTCG
GTGCCAAATCATTCTGATAAATCAAGAACCAAGGTTGAGTTGCGGCAACAAACTGTCTCA
TCGTCTCATCCTGTCAGTCACAATCTCTCAAGTGTCTGCATCTCAAGCAGGATTCACGTC
TACAAGCCAACAAGTGACAGGAATGGTGTTTCTCCTGTTGTTAACAGTAGCCTGAGCCAA
AATATACACAGCAGAGGTCCAAATGCGCTTTTGGCCGTTCCTGTGTCTGCTTCTACACAC
AGTCCAGGAAATATTGCAGCTCCCTCTACCTTTGAACCCAAGCCTGTTGGGACAATGGTG
CAAAAGAAACTATCATCCCAAGCTCAGAGTCGGAATGATTTCTTTGATCGTATGAGAAAG
AAATCTAATGCACATGGCATCCCTCAGGATCAAGATGCTTCACTATCTGATGAGACCCCA
AGGGTGGAGCAATCAACTGAGATCTTGGGTGAAAATACATGCAACAGTGACTCTTTCGAC
GGAAAGAATACTGACAAGAGCTTTTCAACTTGTGATGCGATGTTGTGTTCAGACGAGGAA
GAGGCTGCACTTTTGCGTTCTATGGGCTGGGAGGAAAATGCTGATGAGGGTGGCCTTACA
GAGGAGGAGATCAGTGCCTTCTACAAAGATGTTGCGAAGTGCATCAATTCGAAGCTGGCA
TTAAAGATAATGCATGGGATCAAATGA

Peptide Sequence

PEP ID

Solyc01g104540.3.1
PEP Infomation

C-jun-amino-terminal kinase-interacting protein 3, putative (AHRD V3.3 *** A0A061FHN5_THECC)
Sequence

METSEPTLAPQWLRSGKHVSSFGAASSRLHPDDAAPSKHAHKRSLSVNTDNKEWRRPASS
DRAISSRTRWSSNSSNSPNFQSYNNFRNHHRDMDKDINKYRESSTLRNHRSRDFSDTSKK
HHLEIFEEGLQSPSMTSGRISEKWPRNLSNAGKIKLTDNNGVLADKAIECGIRPLVTEKR
QTSPGLGSVGSPGLGTRTQGIPTSPSGSTVNKLASALAVTTAVAGNDNSGLSSMKRAASS
GPSSPIFSKSSGRCLNMAETVAKGLPCAQTISQVSQANHRLEELAMKQSRQLIPLVAKAS
VPNHSDKSRTKVELRQQTVSSSHPVSHNLSSVCISSRIHVYKPTSDRNGVSPVVNSSLSQ
NIHSRGPNALLAVPVSASTHSPGNIAAPSTFEPKPVGTMVQKKLSSQAQSRNDFFDRMRK
KSNAHGIPQDQDASLSDETPRVEQSTEILGENTCNSDSFDGKNTDKSFSTCDAMLCSDEE
EAALLRSMGWEENADEGGLTEEEISAFYKDVAKCINSKLALKIMHGIK*

Transcript Sequence

Transcript ID

Solyc01g104540.3.1
Transcript Infomation

C-jun-amino-terminal kinase-interacting protein 3, putative (AHRD V3.3 *** A0A061FHN5_THECC)
Sequence

AAATCTAGGGTTTCACTGTTTCCTTGTTATCTGTAGTGGGTCGGACTGATTTCTCACGGT
AGAGTCGTAGTTTTCTGGTTTCTTGGTTTATTCATTGGTTTTTACTGATTGAAATTTAGT
TGAAGATGGAATAGGGTTCTTGTTGATGATATTTAGTGCACAGAATGGATCATCCATAGT
GAATAGCATTGTGGGGTTGTCTCTTTTTGAATCATATAGGGTTCTGGAAATTTTGATTTT
GATTTTGTTTCTAAAGCATGAGAAATATGGGGAGTGCAGACGAGTAGCCGAATCATATTA
ATCTCGGGCTGGATTGACTCATCTAACTCGTTTGAGTGTTCCTCTTTAGTGTGATTGCTT
AAGTATTATAATTTTGTGTCTTTTAGGGTTTAATTTTTGTAAGAGAGGAACTGGGTTGCT
TGGATGCATAGAACTAAAATAGGTTAGGATGGAAACAAGTGAACCTACATTAGCCCCACA
ATGGTTAAGGAGCGGTAAACATGTGTCAAGCTTCGGCGCCGCATCATCCCGGTTGCATCC
AGATGATGCAGCCCCATCAAAACATGCACACAAGAGATCACTGTCAGTGAATACGGACAA
TAAAGAGTGGAGGCGTCCTGCTTCATCTGATCGAGCCATCTCTTCACGGACTCGGTGGAG
CTCCAACAGTAGTAATTCCCCTAACTTTCAATCTTACAATAATTTTAGAAATCATCACAG
AGACATGGATAAAGACATTAACAAGTACCGGGAGTCATCAACTTTAAGAAATCATAGGTC
TAGGGACTTTTCCGATACTTCCAAGAAACATCACTTGGAAATATTTGAGGAAGGGTTACA
GTCACCTTCAATGACTTCTGGTAGAATTAGTGAGAAATGGCCTAGGAATTTGAGCAATGC
TGGTAAGATCAAACTAACTGACAACAATGGCGTGCTTGCGGATAAAGCAATTGAATGTGG
CATCCGACCCTTAGTAACTGAAAAACGACAAACATCACCTGGCCTTGGAAGTGTCGGATC
TCCTGGTTTGGGTACTAGGACTCAGGGTATACCAACAAGTCCGTCAGGCAGTACTGTCAA
CAAGTTGGCATCTGCATTAGCAGTTACTACAGCAGTTGCCGGTAACGATAACTCTGGTCT
ATCTTCCATGAAACGAGCTGCCTCTTCTGGACCTTCTTCTCCAATTTTTAGCAAGTCAAG
TGGCAGATGTCTTAATATGGCTGAAACTGTCGCTAAGGGTCTTCCTTGTGCTCAGACTAT
TTCCCAGGTGTCCCAAGCAAATCACCGACTTGAAGAGCTTGCTATGAAGCAATCTAGGCA
ATTGATACCACTGGTGGCTAAGGCCTCGGTGCCAAATCATTCTGATAAATCAAGAACCAA
GGTTGAGTTGCGGCAACAAACTGTCTCATCGTCTCATCCTGTCAGTCACAATCTCTCAAG
TGTCTGCATCTCAAGCAGGATTCACGTCTACAAGCCAACAAGTGACAGGAATGGTGTTTC
TCCTGTTGTTAACAGTAGCCTGAGCCAAAATATACACAGCAGAGGTCCAAATGCGCTTTT
GGCCGTTCCTGTGTCTGCTTCTACACACAGTCCAGGAAATATTGCAGCTCCCTCTACCTT
TGAACCCAAGCCTGTTGGGACAATGGTGCAAAAGAAACTATCATCCCAAGCTCAGAGTCG
GAATGATTTCTTTGATCGTATGAGAAAGAAATCTAATGCACATGGCATCCCTCAGGATCA
AGATGCTTCACTATCTGATGAGACCCCAAGGGTGGAGCAATCAACTGAGATCTTGGGTGA
AAATACATGCAACAGTGACTCTTTCGACGGAAAGAATACTGACAAGAGCTTTTCAACTTG
TGATGCGATGTTGTGTTCAGACGAGGAAGAGGCTGCACTTTTGCGTTCTATGGGCTGGGA
GGAAAATGCTGATGAGGGTGGCCTTACAGAGGAGGAGATCAGTGCCTTCTACAAAGATGT
TGCGAAGTGCATCAATTCGAAGCTGGCATTAAAGATAATGCATGGGATCAAATGAAGTTT
ATGATGCCTCTCCGCTCTTGAATTTGAGATGTTTGCGCCATTTCTTCTTGATACAGCTTA
ACCCAAATGCTATACGAAAATGGTTCATGGTTTTTGTCTGTACTTGATTCAGAAACTTTT
CTGATAACTTTTCTCGTTCGATAGATTTTGTGGGAAGCAATGAGAGAATAGAGAGGGTTA
TTGTTTATGTGCTTTCCCAGTCCTGTGCATGAATCTTGATTGGTTTTGGCACCTTTTAAC
TTCGTAGATTCTGGTAATATATAGATTGTGCCTTTGTTTTGGAGGGTTGGAAATCAACTT
TTTAAGAATGACCCTAATAATTAGAGTTTAGAACTTTACTTGCCTCAACTTTACAAAAGA
AAATTGTTTCTAGAAATCATATCTGCTTTGAAAGTAATTATAATAATTTGCATGCTGCTG
CATGTTGAATTAGTATTTGGTATTGTAGGTTTTTATTATGCTTCTTTAGAGTTGAGGTTG
GTAACCATATGCCTTTTTTGATGCTTAAATTGTTTGTTACCTTGGCAAATAATTTTTTGC
TACAATTTGGCCCGTGTTTGGCCATAG