Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g104480.3.1
CDS Infomation

C-jun-amino-terminal kinase-interacting protein 3, putative (AHRD V3.3 *** A0A061FHN5_THECC)
Sequence

ATGGAAACAAGTGAACCTACATTAGCCCCACAATGGTTAAGGAGCGGTAAACATGCGACA
AGCTTCGTCTCCGCATCATCCCGGTTGCATCCAGATGATGCAGCCCCATCAAAACATGCA
TACAAGAGATCACTGTCAGTGAATACGGACAATAAAGAGTGGAGGTGTCCTGGTTCTTCA
TCTGATCGAGCCATCTCTTCACGGACTCGGTGGAGCTCCAACAGTAGTAACTCCCTTAAC
TTTCAATCTTATAATAATTTTAGAAATCATCACAGAGACATGGATAAAGACATTAGCAAG
TACCGGGAGACATCAACTTTAAGAAATCATAGGTCTAGGGACTTTTCCGATAATTCCAGG
AAACATCACTTGGAAATATTTGAGGAAGGGTTAAGACAGTCACCTTCAATGACTTCTGGT
AGAATTAGTGAGAAATGGCCTAGGAATTTGAGCAATGCTGGTAAGATCAAACTAACTGAC
AACAATGGCGTGCTTGCGGATAAAGCAATTGAATGTGGCATCCGACCCTTAGTAACTGAA
AAACGACAAACATCACCTGGCCTTGGAAGTGTCGGATCTCCTGGTTTGGGTACTAGGACT
CAGGGTATACCAACTAGTCCGTCAGGCACTACTGTCAACAAGTTGGCATCTGCATTAGCA
GTCACTACCGCAGTTGCCGGTAACGATAACTCTGGTCTATCTTCCATGAAACGAGCTGCC
TCTTCTGGACCTTCTTCTCCAACTTTTAGCAAGTCAAGTGGCAGATGTCTTAATATGGCT
GAAACTGTCGCTAAGGGTCTTCCTTGTGCTCAGACTATTTCCCAGGTGTCCCAAGCAAAT
CACCGACTTGAAGAGCTTGCTGTGAAGCAATCTAGGCAATTGATACCACTGGTAGCTAAG
GCCTCGGTGCCAAATCATTCTGATAAATCAAGAACTAAGGTTGAGTTGCGGCAACAAACT
GTCTCATCGTCTCATCCTGTCAGTCAAAATCTCTCAAGCGTCTGCATCTCAAGCAGGATT
CACGTCTCTAAGCTAACAAGTGACAGGAATGGTGTTTCTTCTGTTGTTAACAGTAGCCTG
AGCCCAAATATACACAGCAGAGGTCCAAATGCGCATTTGGCCGTTCCTGTGTCTGCTTCT
ACACACAGTCCCGCAAATATTGCAGCTCCCTCTACCTTTGAACCCAAGCCTGTTGGAACA
ATGGTGCAAAAGAAACTATCATCCCAAGCTCAGAGTCGGAATGATTTCTTTGAACGTATG
AGAAAGAAATCTAATGCACATAGTATCCCTCAGGATCAAGATGCTTCACTATCTGATGAG
ACCCCAAGGGTGGAGCAATCAACTGAGGTCTTGGGTGAAAATACATGCAACAGTGACTCT
TTCGACGGAAAGAATACTGACAAGAGCTTTTCAACTTGTGATGCAATGTTGTGTTCAGAC
GAGGAAGAGGCTGCACTTTTGCGTTCTATGGGCTGGGAGGAAAATGCTGATGAGGGTGGC
CTTACAGAGGAGGAGATCAATGCCTTCTACAAAGATGTTGCAAAGAATAGGTGCAGGGCA
TCAATTCGAAGCTGTTGTTAA

Peptide Sequence

PEP ID

Solyc01g104480.3.1
PEP Infomation

C-jun-amino-terminal kinase-interacting protein 3, putative (AHRD V3.3 *** A0A061FHN5_THECC)
Sequence

METSEPTLAPQWLRSGKHATSFVSASSRLHPDDAAPSKHAYKRSLSVNTDNKEWRCPGSS
SDRAISSRTRWSSNSSNSLNFQSYNNFRNHHRDMDKDISKYRETSTLRNHRSRDFSDNSR
KHHLEIFEEGLRQSPSMTSGRISEKWPRNLSNAGKIKLTDNNGVLADKAIECGIRPLVTE
KRQTSPGLGSVGSPGLGTRTQGIPTSPSGTTVNKLASALAVTTAVAGNDNSGLSSMKRAA
SSGPSSPTFSKSSGRCLNMAETVAKGLPCAQTISQVSQANHRLEELAVKQSRQLIPLVAK
ASVPNHSDKSRTKVELRQQTVSSSHPVSQNLSSVCISSRIHVSKLTSDRNGVSSVVNSSL
SPNIHSRGPNAHLAVPVSASTHSPANIAAPSTFEPKPVGTMVQKKLSSQAQSRNDFFERM
RKKSNAHSIPQDQDASLSDETPRVEQSTEVLGENTCNSDSFDGKNTDKSFSTCDAMLCSD
EEEAALLRSMGWEENADEGGLTEEEINAFYKDVAKNRCRASIRSCC*

Transcript Sequence

Transcript ID

Solyc01g104480.3.1
Transcript Infomation

C-jun-amino-terminal kinase-interacting protein 3, putative (AHRD V3.3 *** A0A061FHN5_THECC)
Sequence

AAATCTAGGGTTTCACTGTTGCCTTGTTATCTGTAGTGGGTCGGACTGATTTTTCACGGT
AGAGTCATAGTTTTCTGGTTTCTTGGTTTCTTCATAGTTTTCTGGTTTCTTGGTTTATTC
ATTGGTTTTTACTGATTGAAATTTAGTTGAGGATGGAATAGCGTTCTTGTTGATGATATT
TAGTGCACAGAATGAATAATCCATGGTGAATAGCATTGTGGGGTTGTCTCTTTTTGAATC
ATTCTGATTTTGTTTCTGAAGCACGAGAAATATGGTGAGTGCAGACGAGTAGTCGAATCG
TATTTATCTCGGGCTTGATTGTCTCATCTAACTCACCCTTAAGGAGGTTTGAGTGTTCCT
CTTTAGGGTGATTGCTTATAGGATTAAAATTTTATGTCTTTTGGGGTTTAATTTTTGTAA
GAGAGGAACTGGGTTGCTTGGATGCATAGAACTAAAATAGGTTGGGATGGAAACAAGTGA
ACCTACATTAGCCCCACAATGGTTAAGGAGCGGTAAACATGCGACAAGCTTCGTCTCCGC
ATCATCCCGGTTGCATCCAGATGATGCAGCCCCATCAAAACATGCATACAAGAGATCACT
GTCAGTGAATACGGACAATAAAGAGTGGAGGTGTCCTGGTTCTTCATCTGATCGAGCCAT
CTCTTCACGGACTCGGTGGAGCTCCAACAGTAGTAACTCCCTTAACTTTCAATCTTATAA
TAATTTTAGAAATCATCACAGAGACATGGATAAAGACATTAGCAAGTACCGGGAGACATC
AACTTTAAGAAATCATAGGTCTAGGGACTTTTCCGATAATTCCAGGAAACATCACTTGGA
AATATTTGAGGAAGGGTTAAGACAGTCACCTTCAATGACTTCTGGTAGAATTAGTGAGAA
ATGGCCTAGGAATTTGAGCAATGCTGGTAAGATCAAACTAACTGACAACAATGGCGTGCT
TGCGGATAAAGCAATTGAATGTGGCATCCGACCCTTAGTAACTGAAAAACGACAAACATC
ACCTGGCCTTGGAAGTGTCGGATCTCCTGGTTTGGGTACTAGGACTCAGGGTATACCAAC
TAGTCCGTCAGGCACTACTGTCAACAAGTTGGCATCTGCATTAGCAGTCACTACCGCAGT
TGCCGGTAACGATAACTCTGGTCTATCTTCCATGAAACGAGCTGCCTCTTCTGGACCTTC
TTCTCCAACTTTTAGCAAGTCAAGTGGCAGATGTCTTAATATGGCTGAAACTGTCGCTAA
GGGTCTTCCTTGTGCTCAGACTATTTCCCAGGTGTCCCAAGCAAATCACCGACTTGAAGA
GCTTGCTGTGAAGCAATCTAGGCAATTGATACCACTGGTAGCTAAGGCCTCGGTGCCAAA
TCATTCTGATAAATCAAGAACTAAGGTTGAGTTGCGGCAACAAACTGTCTCATCGTCTCA
TCCTGTCAGTCAAAATCTCTCAAGCGTCTGCATCTCAAGCAGGATTCACGTCTCTAAGCT
AACAAGTGACAGGAATGGTGTTTCTTCTGTTGTTAACAGTAGCCTGAGCCCAAATATACA
CAGCAGAGGTCCAAATGCGCATTTGGCCGTTCCTGTGTCTGCTTCTACACACAGTCCCGC
AAATATTGCAGCTCCCTCTACCTTTGAACCCAAGCCTGTTGGAACAATGGTGCAAAAGAA
ACTATCATCCCAAGCTCAGAGTCGGAATGATTTCTTTGAACGTATGAGAAAGAAATCTAA
TGCACATAGTATCCCTCAGGATCAAGATGCTTCACTATCTGATGAGACCCCAAGGGTGGA
GCAATCAACTGAGGTCTTGGGTGAAAATACATGCAACAGTGACTCTTTCGACGGAAAGAA
TACTGACAAGAGCTTTTCAACTTGTGATGCAATGTTGTGTTCAGACGAGGAAGAGGCTGC
ACTTTTGCGTTCTATGGGCTGGGAGGAAAATGCTGATGAGGGTGGCCTTACAGAGGAGGA
GATCAATGCCTTCTACAAAGATGTTGCAAAGAATAGGTGCAGGGCATCAATTCGAAGCTG
TTGTTAAGAAGTACAAAGCTCCACTTTATTGACTGAAAAGATTTCCTGGCACTAAACCAT
CCCCTTTTTTGTGCAGTGCATCAATTCGAAGCTGGCATTAAAGATAATGCATGGGATCCA
AATGAAGTTTATGTTGCCTCTCCACTCTTGAATTGGAGATGTTGGCACCATTTCTTCTTG
ATACAGCTTAACCCAAATGCTATACGAAAATGGTTCATGGTTTTTGTCTGTACTTGATTC
AGAAACTTTTCTGATAACTTTTCTCGTTCGATAGATTTTGTGGGAAGCAATGAGAGAATG
GAGAGGGTTATAGTTTATGTGCTTTCCCAGTCTTGTGGATGAATCTCGATTGGTTTTGGC
ACCTTTTAACTTCGTAGATTCTGGTAATATATAGA