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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g104240.3.1
CDS Infomation

Hydroxyproline-rich glycoprotein family protein, putative (AHRD V3.3 *** A0A061DX06_THECC)
Sequence

ATGGGGAAATTGCAAGGACAGAGACTGCCAGTGCAGAACCAGAACGGCGATGGAGTTGGT
TCTACAACTTTCTGTCAGAGATGTTCGATGGGTTTTTCAAGAATCGGCTTACAATTTAGT
TTCAGGTGTATCGCCGTTTTGCTACTGAGTATTGCCCTTTTTCTCTCTGCTGTCTTCTGG
ATCCTTCCACATCGTTCTAAGTTATCTGGGTTTGACGCTAAAGAGGCGATCAAGCATGCC
GCCACTACTCAAGCATACTTCAGATTGGAGAAGCCAGTTTCAGACATTGTTCCCCACATT
GCAAGACTGGAGTATGATATTTTGGAAGAGATTGCTATCCCTAACATGAAGGTTTCTGTC
CTATCTGTGCATGCAGCAGGTTTGGCTAACCAGACTAACGTAATATTTGGTTTTCTTCCG
GATCCAGTTGATTCTTCTAGTACTCCAGTGTACTTAAGTCTGCTGAAGTCCGCTTTATTG
GAACTGTATCTTCGAGATACCAATTTGACATTAACTTCCTCAATATTTGGACAACCATCT
TCATTTGAGGTTTTGAAGTGTCCCGGTGGAATCACTTTGATGCCCGAGCACCTACCCTTT
TGGGACCTACCTGATGTCCTCTTCAATTTTACTCTCCACAGCTCTATTGATGAAATAAGG
GAAAATTTTATTGAGCTGAAGGAACAACTGATATCTGGCTTACGTCTCAGTCAGAGTGAG
AGTGTTTTCTTACAGATATCAAATAAAGTTGGCTCCACTAAAGATCCCCCAGTTGTAGTT
GAAGCTTCAGTATATTCAGATATTGGGAGTCTGCAACCTCAGAGGTTAAAACAATTGGCT
CAAATAATTATGGGATCTGTTCCTAAATCAAATCTTGGCCTTGATAACTCTGTTTTTGGT
AAAGTGAATCAAGTAAGTTTATCTTCCTTTCTAAACCGTACTGTCCATGCTGCCTCGCCT
GCTCCAACTCCAGCTCCTGCTCCAAATGAACCTTTGTGGCCATCACCTTCCCCATCACCT
TCTGTTTCTTCATCTCCATCTCCATCTCCAGCTCCCTTGTCCAACTGTCGTAGATTACGG
TCACATGCTAGACATCATTGTGGTCCAGCTCATGGAGAAGAACCTAGCAGCTCTCCATCT
CCTATAGCTGATCCACCTTCTCCTGTGACAAGCTCTGGTCCACCTTCAAGTAGTTCTGGA
GTTGCAGCAAGCCCATCATCACATGCACCTACTTATCCTCCAAAACTAAGTCCCAGGGTG
AATCTTTCTCCTGGTCCTTCTCCACAAATGTCTTCCTCAATCTCATCTTCATCATCATCT
CTTGCACCTGGCTTTTCTTACAAGGGGCTCTGCTTGTTCTGGTTATTTGGATTGGCAGTA
TTTCAAATCCTTGGTTGGACGTGGTGA

Peptide Sequence

PEP ID

Solyc01g104240.3.1
PEP Infomation

Hydroxyproline-rich glycoprotein family protein, putative (AHRD V3.3 *** A0A061DX06_THECC)
Sequence

MGKLQGQRLPVQNQNGDGVGSTTFCQRCSMGFSRIGLQFSFRCIAVLLLSIALFLSAVFW
ILPHRSKLSGFDAKEAIKHAATTQAYFRLEKPVSDIVPHIARLEYDILEEIAIPNMKVSV
LSVHAAGLANQTNVIFGFLPDPVDSSSTPVYLSLLKSALLELYLRDTNLTLTSSIFGQPS
SFEVLKCPGGITLMPEHLPFWDLPDVLFNFTLHSSIDEIRENFIELKEQLISGLRLSQSE
SVFLQISNKVGSTKDPPVVVEASVYSDIGSLQPQRLKQLAQIIMGSVPKSNLGLDNSVFG
KVNQVSLSSFLNRTVHAASPAPTPAPAPNEPLWPSPSPSPSVSSSPSPSPAPLSNCRRLR
SHARHHCGPAHGEEPSSSPSPIADPPSPVTSSGPPSSSSGVAASPSSHAPTYPPKLSPRV
NLSPGPSPQMSSSISSSSSSLAPGFSYKGLCLFWLFGLAVFQILGWTW*

Transcript Sequence

Transcript ID

Solyc01g104240.3.1
Transcript Infomation

Hydroxyproline-rich glycoprotein family protein, putative (AHRD V3.3 *** A0A061DX06_THECC)
Sequence

TAGTTTTTTTAACTTATTGAGTTTCTTTCAAATATTTGATTTTTTAAAATAAATTTATTA
ACCGGTCTTTTAATTAGCTCAATCTATTATGCTCATTTTTATTAATCCCAACTATTTTCG
TCCAAGTAAATTTTGAGGTCTCTAACAACTTATGTAATTAGCAAATATAATTATACGTAT
CTTTAATTTAATATCATAAAATTCGAAAGAAATCAGTAATATTTGTTGTTTTAATGAATA
ATCCCCCTCCATTCACTGGCATTGTCACTTTCTCTTTGTTTCCTCTCTCTTTCACCTTTG
CTTCTACCCAACGCTTCGTTTTGCCGAATAATTCCCTTTATATATTCTAAATCCAATATA
ATAATTCATCTTTCAAGCTTTTTTAGCTTAGTGGACTTCAACTGTAATGGCATTCTACTG
TTTTTTTTTTTTTTTGTATTAAACATATATGTTCACAGTTCACCATAAACACTTGGCTTT
GAGTAAACCCAGTTGTCAATCCGATTTTTATTTCCTAGAGAGAGAGGGGGAAAAGGGGTG
TAGTGGAAGTCCTATATAGAGAGAAACACGGATTACAGATGCTCTGGGCATGGGGAAATT
GCAAGGACAGAGACTGCCAGTGCAGAACCAGAACGGCGATGGAGTTGGTTCTACAACTTT
CTGTCAGAGATGTTCGATGGGTTTTTCAAGAATCGGCTTACAATTTAGTTTCAGGTGTAT
CGCCGTTTTGCTACTGAGTATTGCCCTTTTTCTCTCTGCTGTCTTCTGGATCCTTCCACA
TCGTTCTAAGTTATCTGGGTTTGACGCTAAAGAGGCGATCAAGCATGCCGCCACTACTCA
AGCATACTTCAGATTGGAGAAGCCAGTTTCAGACATTGTTCCCCACATTGCAAGACTGGA
GTATGATATTTTGGAAGAGATTGCTATCCCTAACATGAAGGTTTCTGTCCTATCTGTGCA
TGCAGCAGGTTTGGCTAACCAGACTAACGTAATATTTGGTTTTCTTCCGGATCCAGTTGA
TTCTTCTAGTACTCCAGTGTACTTAAGTCTGCTGAAGTCCGCTTTATTGGAACTGTATCT
TCGAGATACCAATTTGACATTAACTTCCTCAATATTTGGACAACCATCTTCATTTGAGGT
TTTGAAGTGTCCCGGTGGAATCACTTTGATGCCCGAGCACCTACCCTTTTGGGACCTACC
TGATGTCCTCTTCAATTTTACTCTCCACAGCTCTATTGATGAAATAAGGGAAAATTTTAT
TGAGCTGAAGGAACAACTGATATCTGGCTTACGTCTCAGTCAGAGTGAGAGTGTTTTCTT
ACAGATATCAAATAAAGTTGGCTCCACTAAAGATCCCCCAGTTGTAGTTGAAGCTTCAGT
ATATTCAGATATTGGGAGTCTGCAACCTCAGAGGTTAAAACAATTGGCTCAAATAATTAT
GGGATCTGTTCCTAAATCAAATCTTGGCCTTGATAACTCTGTTTTTGGTAAAGTGAATCA
AGTAAGTTTATCTTCCTTTCTAAACCGTACTGTCCATGCTGCCTCGCCTGCTCCAACTCC
AGCTCCTGCTCCAAATGAACCTTTGTGGCCATCACCTTCCCCATCACCTTCTGTTTCTTC
ATCTCCATCTCCATCTCCAGCTCCCTTGTCCAACTGTCGTAGATTACGGTCACATGCTAG
ACATCATTGTGGTCCAGCTCATGGAGAAGAACCTAGCAGCTCTCCATCTCCTATAGCTGA
TCCACCTTCTCCTGTGACAAGCTCTGGTCCACCTTCAAGTAGTTCTGGAGTTGCAGCAAG
CCCATCATCACATGCACCTACTTATCCTCCAAAACTAAGTCCCAGGGTGAATCTTTCTCC
TGGTCCTTCTCCACAAATGTCTTCCTCAATCTCATCTTCATCATCATCTCTTGCACCTGG
CTTTTCTTACAAGGGGCTCTGCTTGTTCTGGTTATTTGGATTGGCAGTATTTCAAATCCT
TGGTTGGACGTGGTGACTGTCGTGTTCTGGTTTGACAAGATTTTAACATCTTCAAAGAAG
AAGAGAGGTGTATACTTAGCAACAAACAACTTTATTTGATTAGGAATTATAGCATCATTT
GCCAGTTAGTCTGTGGTTACCATGGCAAGTCACGGTAACCACACTATATGAAGAGAAGAA
ATCACAGGTCAAAGCCAAAAGGTGGCAGGACTCTGTTTGACATCACATGAAGACAGTTAC
AAAGATGTTTTCTTCCCGAAGGGAATGACTACTACATGCTCATCTGCAGGTTTTCAAGGA
GATACCAGTCGTAAGATATGTTGGTTCATCTTGAACAAGCTGCAAAAATAATGCAAAAGA
GCTAATATTTTACCATATTGTATATTCTTACTCAAAACTGTACTCAGCTGCTTTTCATGT
GC