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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g104010.2.1
CDS Infomation

LOW QUALITY:BPS1-like protein (AHRD V3.3 *** AT1G22030.1)
Sequence

CAACAAAAAGAAAAAGAAAAAATCTTCATGATGAGTCATTCTTCATCTACAACTTCTGTT
AATGGATTCTACAACTTCTTAACTAGAGGACTTGACAATCTTGATCACTTATTCCTATCT
CAAAACTTCATGTCTTTTCATTTTCTTCAACATGTTTTGTCATCTTTAAGGTCTTTTCAT
TCCCAATTAACATTACTAGTTCAAAAGTTACATTTGCCTGTTGGAGAAAAATGGCTTGAT
GAGTATATGGATGAAAGTTCAAGGCTTTGGGAAGCTTGCCATGTTCTTAAATCAGCAATC
ACAAGCATGGAGAATTATTACACTGCTGGTGCTAATTTTGCTTCTTCTCTTGATGATCAC
CACATTTTAAATCCCCTGCTTTCCCGCCAGGTGATTCGAGCGATTAATCGGTGTCAGAGG
GAAATAGTAGGACTTGAAGAAGAGAACAAGAGCTTAATGGAAACAAGAATGCAAGATTTA
TCATTGAATTTCGACGAAAATGTTCTGATAGGATCAAAATTCAATGGATTTAGTGGGTTC
AGAGGAGTGCTTTATGCAATGAAGAATGTCAGTTCATTGCTTTTGGTTATTTTAGTAAGT
GGACTTGTATATTGTTGGCCACAAACAAGTTTTTACCAAAGTGGTAGTAATGAAGGGAAC
ATGGTTTTTGGTTCATCTTTTATGGTTTCCACTTCAAGATTGTATCAAAGAGTTGCAGCA
GAGGTGAATCAGGCTGAAGGACAACTCCCAGGGATACTACTTTTCGAGTATCGAAGAGCA
AGAGTAGCCATGGCTGAGCTGAAAATTGAAGTAGAAAGAGCAAAAGAATGTGGAGTAGTA
TTGTCACAAGTTGACATCCATGATAAGATTGAAAATTTGAAAGATTGCTTTGGAATGTTG
AAATGTGGGGCAGAAAGCATCATTGGACAACTTGATGACTTCTTTGATGAAATAGTTGAA
GGAAGAAAGAAACTTTTGGACTTGTGCACTCATAGGTAA

Peptide Sequence

PEP ID

Solyc01g104010.2.1
PEP Infomation

LOW QUALITY:BPS1-like protein (AHRD V3.3 *** AT1G22030.1)
Sequence

QQKEKEKIFMMSHSSSTTSVNGFYNFLTRGLDNLDHLFLSQNFMSFHFLQHVLSSLRSFH
SQLTLLVQKLHLPVGEKWLDEYMDESSRLWEACHVLKSAITSMENYYTAGANFASSLDDH
HILNPLLSRQVIRAINRCQREIVGLEEENKSLMETRMQDLSLNFDENVLIGSKFNGFSGF
RGVLYAMKNVSSLLLVILVSGLVYCWPQTSFYQSGSNEGNMVFGSSFMVSTSRLYQRVAA
EVNQAEGQLPGILLFEYRRARVAMAELKIEVERAKECGVVLSQVDIHDKIENLKDCFGML
KCGAESIIGQLDDFFDEIVEGRKKLLDLCTHR*

Transcript Sequence

Transcript ID

Solyc01g104010.2.1
Transcript Infomation

LOW QUALITY:BPS1-like protein (AHRD V3.3 *** AT1G22030.1)
Sequence

CAACAAAAAGAAAAAGAAAAAATCTTCATGATGAGTCATTCTTCATCTACAACTTCTGTT
AATGGATTCTACAACTTCTTAACTAGAGGACTTGACAATCTTGATCACTTATTCCTATCT
CAAAACTTCATGTCTTTTCATTTTCTTCAACATGTTTTGTCATCTTTAAGGTCTTTTCAT
TCCCAATTAACATTACTAGTTCAAAAGTTACATTTGCCTGTTGGAGAAAAATGGCTTGAT
GAGTATATGGATGAAAGTTCAAGGCTTTGGGAAGCTTGCCATGTTCTTAAATCAGCAATC
ACAAGCATGGAGAATTATTACACTGCTGGTGCTAATTTTGCTTCTTCTCTTGATGATCAC
CACATTTTAAATCCCCTGCTTTCCCGCCAGGTGATTCGAGCGATTAATCGGTGTCAGAGG
GAAATAGTAGGACTTGAAGAAGAGAACAAGAGCTTAATGGAAACAAGAATGCAAGATTTA
TCATTGAATTTCGACGAAAATGTTCTGATAGGATCAAAATTCAATGGATTTAGTGGGTTC
AGAGGAGTGCTTTATGCAATGAAGAATGTCAGTTCATTGCTTTTGGTTATTTTAGTAAGT
GGACTTGTATATTGTTGGCCACAAACAAGTTTTTACCAAAGTGGTAGTAATGAAGGGAAC
ATGGTTTTTGGTTCATCTTTTATGGTTTCCACTTCAAGATTGTATCAAAGAGTTGCAGCA
GAGGTGAATCAGGCTGAAGGACAACTCCCAGGGATACTACTTTTCGAGTATCGAAGAGCA
AGAGTAGCCATGGCTGAGCTGAAAATTGAAGTAGAAAGAGCAAAAGAATGTGGAGTAGTA
TTGTCACAAGTTGACATCCATGATAAGATTGAAAATTTGAAAGATTGCTTTGGAATGTTG
AAATGTGGGGCAGAAAGCATCATTGGACAACTTGATGACTTCTTTGATGAAATAGTTGAA
GGAAGAAAGAAACTTTTGGACTTGTGCACTCATAGGTAATTTTTAAAGGACACACAAGGG
GGGGAAAAAATATGTGCCTTCATTAGGAGATGGTAGAAATGTAACAATAACTTTAG