Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g103695.1.1
CDS Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 - B9SSN0_RICCO)
Sequence	ATGGCACCGAAGAAGAAACCTCAATCATCCAAAGGCAAAGGTTCTTCTTCCACCGGTCCT AAATTGCAAATTTCTGCCGAGGACGAGAATCGTCTCCGACGATTGTTGCTTAATTCAGGC CACTCCACTCAGTCTCCGACTCCGATTCCAGCAGAGGATGCCCTGTCAAAAGCGCAGAAG GCCAAGAAACTCCGTTCTATTTACGAAAAGCTTTCCTGCGAGGGGTTCTCCAATAATCAA ATTGAACTTGCGTTATCCGCTCTCAAGGAGAGAGCCACGTTTGAAGCTGCTTTAGATTGG CTATGCTTGAATTTGCGAGGAAATGAGCTTCCTCTGAAGTTTTCAAGTGGTACTTCCCAA TCGAACGAAGGTTCTGTTGGTATCATATCAACTGCTCGACAAGATTGGGTTCCTTCAGCA GATTCATCTGTTGCAGAAGTTAAAGAGGAGAAAATACCTACAGTTTCAGTTGTGCCAAAG GGTCGAAGTGATAGTGAATTTCTACGCACAGTTGAACGCGCACAAGCTGATTGGATCCGT CAGTATATGGAACAACAGGAAGAGGATGAAGCTGAAAGTTGGGAATCTGGTTTTTCTGAC GATGGTTCCCTAGAGCAGGTCCCACGGAAAAAACGTAGTGTTGAGTCCATTGTTCAAGAA TTTCATACTGCTAGGCTGGAAGCTATTCATGCAAAAGAGCGCGGTGACAAAAAGGGCCAG GAACAAGCCAGCCGAATCATTCGGAAGATCAAGCAGGAGATATCTTCTCTAGGACTACCG GATGATATCCTGGAATCTGCACATGAAAGTGCTTCCGATCATGCAGTGTTAGACAGGTCC TCAGAAAAACTTGACGTTGACGATGTTACTTCACCCAATTTCAGAACGTCTGATATTCAT GAACATGAGATAGGAATGGACGAAGTGTCTGTCAATAATAGCTCTAATGAGTTCATCGAA AACAATCCATCAAGTGTTCCTTTAGGTGACAAGGCAGCTTCAGGAGGAGAACCAGAAGAT GTAGAGCTTGGTGATTTCTTATTTGAAGAAGATTCCTCCGCTGATGTGTTGGCTACTGTA CTAGAACTGCAGAAGAAAGAGAAGATGAGAGAGTTATGCAGTCAGAAAAACTTGGAGAAG TTAGAAGGTATATGGAAAAAGGGAGACCCACAAAAGATTCCGAAGGCTTTTCTTCACCAA CTTTGTCAAAGATCAGGATGGGAGGCACCAAAATATGCGAAAATACCTGGAAAAGGAAAT CTGACAAGTTACTCAGTTAGTATAATGCGCAAAGCCAGTGGGAGGGGTAAGAGCAGAAAA GCTGGAGGGCTAGTGACAATGGAGCTTCCTAGTCAGGATCATGCTTCTTCTACTGCTGAG GATGCACAAAACAGAGTTGCAGCGTATGCTCTCCATCGCTTGTTTCCAGATCTCCCAGTT CACATGCCAATTACTGAGCCATATGCATCACTTATTTTGCAGTGGGAGGAAGGTGATTCT GTGAAAGATATTGTTGATGATCAAGTGGAACGAAGGGCCTATTTTGTGGATTCGTTGTTG GATGCTAGCGGTTCAGAAACCATAACTCTTTCAGATGTCTCCAATAATGCTAGCAAAGAA AAGTTTTTACATCCTCACACCACCGAAGATAAGACGGTGCCTGTTGATTATACAGCCAAA AATCCACTTAAAGAAGCAGAAAGTCTCTCTCTGAAAAAGGAGCAGGAGGGTAGGAAGAAG TTGAAGAAGTACCAGGAAATGTTAAAATCACGGGCCGCCCTTCCTATCGCTGACTTAAAA GGCGAGATCCTGCATTCACTAGAGGAGAACGATGTTTTGGTCATTTGTGGGGAAACAGGT TGCGGGAAAACAACCCAGGTCCCTCAATTTATACTGGATGACATGATTGAATCAGGACGT GGGGGACACTGTAACATTATATGCACACAACCAAGGAGAATCGCGGTCAGTGCTACCATT CATTTACCATACATTTACCTGCACTAA

Peptide Sequence

PEP ID	Solyc01g103695.1.1
PEP Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 - B9SSN0_RICCO)
Sequence	MAPKKKPQSSKGKGSSSTGPKLQISAEDENRLRRLLLNSGHSTQSPTPIPAEDALSKAQK AKKLRSIYEKLSCEGFSNNQIELALSALKERATFEAALDWLCLNLRGNELPLKFSSGTSQ SNEGSVGIISTARQDWVPSADSSVAEVKEEKIPTVSVVPKGRSDSEFLRTVERAQADWIR QYMEQQEEDEAESWESGFSDDGSLEQVPRKKRSVESIVQEFHTARLEAIHAKERGDKKGQ EQASRIIRKIKQEISSLGLPDDILESAHESASDHAVLDRSSEKLDVDDVTSPNFRTSDIH EHEIGMDEVSVNNSSNEFIENNPSSVPLGDKAASGGEPEDVELGDFLFEEDSSADVLATV LELQKKEKMRELCSQKNLEKLEGIWKKGDPQKIPKAFLHQLCQRSGWEAPKYAKIPGKGN LTSYSVSIMRKASGRGKSRKAGGLVTMELPSQDHASSTAEDAQNRVAAYALHRLFPDLPV HMPITEPYASLILQWEEGDSVKDIVDDQVERRAYFVDSLLDASGSETITLSDVSNNASKE KFLHPHTTEDKTVPVDYTAKNPLKEAESLSLKKEQEGRKKLKKYQEMLKSRAALPIADLK GEILHSLEENDVLVICGETGCGKTTQVPQFILDDMIESGRGGHCNIICTQPRRIAVSATI HLPYIYLH*

Transcript Sequence

Transcript ID	Solyc01g103695.1.1
Transcript Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 - B9SSN0_RICCO)
Sequence	GCACACGGTATTAAACGTGACCGCGTACAAGCTAGGCCAAGAGCTAGGACCCGTTTTTAT TTGGGCTCACAACCATCGGTCCGGTCTGCGTCTGAACTCTGGCGATCAAGTTCTCTCTCT GCTACTGTGCGTCTGCTCTCACCATTGTTACTTCTTTCACTTTGTATTTACTTGTGTCTC CCGCCCATTTTCTTCTATGGCACCGAAGAAGAAACCTCAATCATCCAAAGGCAAAGGTTC TTCTTCCACCGGTCCTAAATTGCAAATTTCTGCCGAGGACGAGAATCGTCTCCGACGATT GTTGCTTAATTCAGGCCACTCCACTCAGTCTCCGACTCCGATTCCAGCAGAGGATGCCCT GTCAAAAGCGCAGAAGGCCAAGAAACTCCGTTCTATTTACGAAAAGCTTTCCTGCGAGGG GTTCTCCAATAATCAAATTGAACTTGCGTTATCCGCTCTCAAGGAGAGAGCCACGTTTGA AGCTGCTTTAGATTGGCTATGCTTGAATTTGCGAGGAAATGAGCTTCCTCTGAAGTTTTC AAGTGGTACTTCCCAATCGAACGAAGGTTCTGTTGGTATCATATCAACTGCTCGACAAGA TTGGGTTCCTTCAGCAGATTCATCTGTTGCAGAAGTTAAAGAGGAGAAAATACCTACAGT TTCAGTTGTGCCAAAGGGTCGAAGTGATAGTGAATTTCTACGCACAGTTGAACGCGCACA AGCTGATTGGATCCGTCAGTATATGGAACAACAGGAAGAGGATGAAGCTGAAAGTTGGGA ATCTGGTTTTTCTGACGATGGTTCCCTAGAGCAGGTCCCACGGAAAAAACGTAGTGTTGA GTCCATTGTTCAAGAATTTCATACTGCTAGGCTGGAAGCTATTCATGCAAAAGAGCGCGG TGACAAAAAGGGCCAGGAACAAGCCAGCCGAATCATTCGGAAGATCAAGCAGGAGATATC TTCTCTAGGACTACCGGATGATATCCTGGAATCTGCACATGAAAGTGCTTCCGATCATGC AGTGTTAGACAGGTCCTCAGAAAAACTTGACGTTGACGATGTTACTTCACCCAATTTCAG AACGTCTGATATTCATGAACATGAGATAGGAATGGACGAAGTGTCTGTCAATAATAGCTC TAATGAGTTCATCGAAAACAATCCATCAAGTGTTCCTTTAGGTGACAAGGCAGCTTCAGG AGGAGAACCAGAAGATGTAGAGCTTGGTGATTTCTTATTTGAAGAAGATTCCTCCGCTGA TGTGTTGGCTACTGTACTAGAACTGCAGAAGAAAGAGAAGATGAGAGAGTTATGCAGTCA GAAAAACTTGGAGAAGTTAGAAGGTATATGGAAAAAGGGAGACCCACAAAAGATTCCGAA GGCTTTTCTTCACCAACTTTGTCAAAGATCAGGATGGGAGGCACCAAAATATGCGAAAAT ACCTGGAAAAGGAAATCTGACAAGTTACTCAGTTAGTATAATGCGCAAAGCCAGTGGGAG GGGTAAGAGCAGAAAAGCTGGAGGGCTAGTGACAATGGAGCTTCCTAGTCAGGATCATGC TTCTTCTACTGCTGAGGATGCACAAAACAGAGTTGCAGCGTATGCTCTCCATCGCTTGTT TCCAGATCTCCCAGTTCACATGCCAATTACTGAGCCATATGCATCACTTATTTTGCAGTG GGAGGAAGGTGATTCTGTGAAAGATATTGTTGATGATCAAGTGGAACGAAGGGCCTATTT TGTGGATTCGTTGTTGGATGCTAGCGGTTCAGAAACCATAACTCTTTCAGATGTCTCCAA TAATGCTAGCAAAGAAAAGTTTTTACATCCTCACACCACCGAAGATAAGACGGTGCCTGT TGATTATACAGCCAAAAATCCACTTAAAGAAGCAGAAAGTCTCTCTCTGAAAAAGGAGCA GGAGGGTAGGAAGAAGTTGAAGAAGTACCAGGAAATGTTAAAATCACGGGCCGCCCTTCC TATCGCTGACTTAAAAGGCGAGATCCTGCATTCACTAGAGGAGAACGATGTTTTGGTCAT TTGTGGGGAAACAGGTTGCGGGAAAACAACCCAGGTCCCTCAATTTATACTGGATGACAT GATTGAATCAGGACGTGGGGGACACTGTAACATTATATGCACACAACCAAGGAGAATCGC GGTCAGTGCTACCATTCATTTACCATACATTTACCTGCACTAA