Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g103570.3.1
CDS Infomation

Bromodomain-containing factor 2 (AHRD V3.3 *** W9QKA6_9ROSA)
Sequence

ATGAAACGCCGTCGTGGAAGCAAAAAAGGTAAATCAAAGAAGCTTCGGACAACAGGTACA
AGTGAGGGAGCATCTAATAATGGTAGCATGAATTCAGAAACTAGTTCTGGTACTGAAGAT
ATCGACAATGATGGAGTTAACTCTGGCGTTGAGGCTGAGACACCATCCTCTACCGGAACT
GCTCAACCGGAGAAACCTGTGATTGTTTATTCTGGTGTGCCAAGGGACAAACCTCCAGGT
TTAGCAGTTTATGGACGTATGAAAGTAAAACTCAAAACAAAAAAAACACTAGACACTCAG
CTCAATTCTTCAGAAGTAGCTACTCATAGTGATACTGATAAAAGTAGCCAGCAAGCTGGT
CCAGAGAAACAGGTTGTCTCAAATGAGAAAATGGAAGACAGTGCAAACTCATTGCCTGAG
GCTAATGTAACTACCCCAGGAATTGTGCTAAAAAAACCTGGAGGCATAAAGATCAAGTCT
TCAAAGGGCTTTTCTTCAAGCATGAGCCCTTGTAGTAATGTTGAAATAGTGAAGGAAGAG
AAGTCAAAAAAACAAGAGCCTGAGTTACTTCACCGTGATTTGAGATTAAACAAGCAAGAA
CTAGACACTGCTTTGGAGGTTATAAGAAAAATTATGAAAATGGATGCTGCAGAGCCCTTC
AATACTCCAGTCGATCCTATTGCTCTTGGAATTCCTGATTATTTTGATGTCATAACTACA
CCTATGGATTTCGGGACAATATGCAGTAATCTGGAAAGTGGTGGCAAATACATGAATTCC
GAGGACGTCTATAAGGATGTGCAGTATATATGGGAAAACTGCTACAAGTATAATAATAAA
GGTGATTATGTTATGGAGCTCATGAAGCGGGTGAAAAAGAATTTCGCGAAGTACTGGACA
GCAGCTGGCTTATATACTGATCATCTGCAAAGTGCCGAAAGCAGTCAAATTAAGGAGACT
ACACCTTCAAGTCATGGAAAGGAAGTTACAAAAAGTGGTTCTTTAACTCACAAACACAAC
AAAAGGCTTCAAGGGCTCAAGAAGCACAAAGAAGGCTGCCTTTGTGCTATATGTGTGATG
ATACGGCGCAGGCAGGAGCGGGAGGAGATCACCCGGTCCTTGGATGACCAATGCGAGGCT
AGTGATGATTATCCAGATGGCATGAAGCCTGAGGAAACTTCACCTGTAGAAAGTCGAGAA
TACACCTCATCAAATGTGGAGAATTCACCAGAGACAGATGTTGACACCATTATGCAAGAA
AAAGGAGCAGAGAGAAAGTTGTCTGAAAATCAGGACGCTTTATGTGAGAAGCTAGGGGAA
GAGATGAGGAGTGAAATGGGAATCCAAAGTAAAAGAACGGGGGTCACTTCTGAGCATTTG
CAGTCAGGTTATACATCTTTAGATGAGCACAAAGCACATGATCAGAAGCAAAATGGGGAG
CCAGGTCGAGAATTGCTGAATGACGGTGGAAAAGAAAATCTGCAGCATGGGAATGAAAAT
GCTGTAACTGGGCTGCAGAGGCCAAAGGAATTGCAAGACAAGTACAAGAAGGCCAAGATG
TGGGAGAACTTGCGTTATCTTGAAAATACAACAGCTATGGATTTATCTCGAGTTCTGTTT
GCTGATGATCAAAGATCTGTCTGGAATGGACCACATTCACTGGTTAAGCGTGGGGGTTCC
ACCACTCGCAAGAGCTCCATTCGTTCAGCTATTTCCATGCTGATGAAGTAG

Peptide Sequence

PEP ID

Solyc01g103570.3.1
PEP Infomation

Bromodomain-containing factor 2 (AHRD V3.3 *** W9QKA6_9ROSA)
Sequence

MKRRRGSKKGKSKKLRTTGTSEGASNNGSMNSETSSGTEDIDNDGVNSGVEAETPSSTGT
AQPEKPVIVYSGVPRDKPPGLAVYGRMKVKLKTKKTLDTQLNSSEVATHSDTDKSSQQAG
PEKQVVSNEKMEDSANSLPEANVTTPGIVLKKPGGIKIKSSKGFSSSMSPCSNVEIVKEE
KSKKQEPELLHRDLRLNKQELDTALEVIRKIMKMDAAEPFNTPVDPIALGIPDYFDVITT
PMDFGTICSNLESGGKYMNSEDVYKDVQYIWENCYKYNNKGDYVMELMKRVKKNFAKYWT
AAGLYTDHLQSAESSQIKETTPSSHGKEVTKSGSLTHKHNKRLQGLKKHKEGCLCAICVM
IRRRQEREEITRSLDDQCEASDDYPDGMKPEETSPVESREYTSSNVENSPETDVDTIMQE
KGAERKLSENQDALCEKLGEEMRSEMGIQSKRTGVTSEHLQSGYTSLDEHKAHDQKQNGE
PGRELLNDGGKENLQHGNENAVTGLQRPKELQDKYKKAKMWENLRYLENTTAMDLSRVLF
ADDQRSVWNGPHSLVKRGGSTTRKSSIRSAISMLMK*

Transcript Sequence

Transcript ID

Solyc01g103570.3.1
Transcript Infomation

Bromodomain-containing factor 2 (AHRD V3.3 *** W9QKA6_9ROSA)
Sequence

TCTCCAACGTGGAAGGGGAAGGCGAAAAGTGAAAACAAAAGAAAATAAGGGAAAAAAAAA
GGGTTTTTTATGGGTCTTGGTTTCTTGTAATTCCGACAGAGTTTTTCCTTCCGAACCTTA
AAACTTTCAAATATTTTTGGATATTTGAATTCAACCGCCAACGAATATCGAAGCAAAAGA
AAATAGAGTGCAAGTTTTTCCCAACTGAAGGCTAAATTGCAGAAGAAAAGGCTGATCAGT
TCCGTGCTTGCAGTAGCGTTGTGCCAAAATATACAACTTAGCCGATCCTTTCACATCGTT
CTAAGAGTATCAATTTTCAACTGACTAAAGGCTATAGCTCACCTGTATCTGTTTTTAAGG
AAAGATGAAACGCCGTCGTGGAAGCAAAAAAGGTAAATCAAAGAAGCTTCGGACAACAGG
TACAAGTGAGGGAGCATCTAATAATGGTAGCATGAATTCAGAAACTAGTTCTGGTACTGA
AGATATCGACAATGATGGAGTTAACTCTGGCGTTGAGGCTGAGACACCATCCTCTACCGG
AACTGCTCAACCGGAGAAACCTGTGATTGTTTATTCTGGTGTGCCAAGGGACAAACCTCC
AGGTTTAGCAGTTTATGGACGTATGAAAGTAAAACTCAAAACAAAAAAAACACTAGACAC
TCAGCTCAATTCTTCAGAAGTAGCTACTCATAGTGATACTGATAAAAGTAGCCAGCAAGC
TGGTCCAGAGAAACAGGTTGTCTCAAATGAGAAAATGGAAGACAGTGCAAACTCATTGCC
TGAGGCTAATGTAACTACCCCAGGAATTGTGCTAAAAAAACCTGGAGGCATAAAGATCAA
GTCTTCAAAGGGCTTTTCTTCAAGCATGAGCCCTTGTAGTAATGTTGAAATAGTGAAGGA
AGAGAAGTCAAAAAAACAAGAGCCTGAGTTACTTCACCGTGATTTGAGATTAAACAAGCA
AGAACTAGACACTGCTTTGGAGGTTATAAGAAAAATTATGAAAATGGATGCTGCAGAGCC
CTTCAATACTCCAGTCGATCCTATTGCTCTTGGAATTCCTGATTATTTTGATGTCATAAC
TACACCTATGGATTTCGGGACAATATGCAGTAATCTGGAAAGTGGTGGCAAATACATGAA
TTCCGAGGACGTCTATAAGGATGTGCAGTATATATGGGAAAACTGCTACAAGTATAATAA
TAAAGGTGATTATGTTATGGAGCTCATGAAGCGGGTGAAAAAGAATTTCGCGAAGTACTG
GACAGCAGCTGGCTTATATACTGATCATCTGCAAAGTGCCGAAAGCAGTCAAATTAAGGA
GACTACACCTTCAAGTCATGGAAAGGAAGTTACAAAAAGTGGTTCTTTAACTCACAAACA
CAACAAAAGGCTTCAAGGGCTCAAGAAGCACAAAGAAGGCTGCCTTTGTGCTATATGTGT
GATGATACGGCGCAGGCAGGAGCGGGAGGAGATCACCCGGTCCTTGGATGACCAATGCGA
GGCTAGTGATGATTATCCAGATGGCATGAAGCCTGAGGAAACTTCACCTGTAGAAAGTCG
AGAATACACCTCATCAAATGTGGAGAATTCACCAGAGACAGATGTTGACACCATTATGCA
AGAAAAAGGAGCAGAGAGAAAGTTGTCTGAAAATCAGGACGCTTTATGTGAGAAGCTAGG
GGAAGAGATGAGGAGTGAAATGGGAATCCAAAGTAAAAGAACGGGGGTCACTTCTGAGCA
TTTGCAGTCAGGTTATACATCTTTAGATGAGCACAAAGCACATGATCAGAAGCAAAATGG
GGAGCCAGGTCGAGAATTGCTGAATGACGGTGGAAAAGAAAATCTGCAGCATGGGAATGA
AAATGCTGTAACTGGGCTGCAGAGGCCAAAGGAATTGCAAGACAAGTACAAGAAGGCCAA
GATGTGGGAGAACTTGCGTTATCTTGAAAATACAACAGCTATGGATTTATCTCGAGTTCT
GTTTGCTGATGATCAAAGATCTGTCTGGAATGGACCACATTCACTGGTTAAGCGTGGGGG
TTCCACCACTCGCAAGAGCTCCATTCGTTCAGCTATTTCCATGCTGATGAAGTAGGTTTT
TTATTGACTGATGAATATGTGAATCCAAAGTTCTTTTTTTTTCGGTTGTGGAGGTGTACT
GTAGGTCGAGTTGTATAATGTATGTTGAGGGTAATAAACTCTCCCATTAGATTGTAAACA
CAAGAATCAGGACTAGATTGTCTGGCATTTACTATTCAAGAACCCTCTTCAGTTGAGCGT
TTGTAACCTTAATGGCTACTGCAATTATCTTTGTATCAAGGAGACAAATTTGAAATTGCC
AAGCCATTTGCAGAACCAAAGGTAATTGAAATAACAACTAATATAGCATAACATCGGAAG
CAAAGGTAAAATTAACAGGAAATAAGTGCATAAATGACACCAGCATGTTTGATTCATGTA
CATCCAGATTACATGAACTGTAACAATGAAAGTTGGTGTAGAACTACATCCTAGACTAGT
ATTGCCTTCTGTTTTCTCTCCAACCTAATACAACAAAATCAAGT