Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g103540.3.1
CDS Infomation

evolutionarily conserved C-terminal region 2 (AHRD V3.3 *-* AT3G13460.4)
Sequence

ATGGCTGGTGAGAAGATTATAGAAAAACCTGAAGCTGTTGCTCCGGGACTGAAATCTGAT
CCCTCTAACAAACTGATTGAGAAGGATTTGGTTTCAAAAAAAGATGGAAAAGCTGCTGAC
TCGGTGGCTTCTTTGGGAGCTGTGACCAGCATCAAGTGTGAAAATGATCAACCACCTGCT
GCAGAGCAAGGATATAATGGGACTTATAATCAGTTAGATGAGCAGGCTTACTTTAATGCG
GGTGTTCAATCAGACAATGGTTCCCTTCTCTACTATATGCCTGGCTATAATCCTTACAGT
GCTGGATTTGTGGGAGGCGATGGGAAGCAGCCCTATCCTTCGTCCGGATATCTCCAGCAA
CCTGTCTCATATGGTTCAGATTCCATGCCATGTTATACATGGGGCTCGCCATACTGTGCT
GATATCACCAATAGTGCTGCTCCAAAATCCGGGAACGTTAAATCAACTTTTGGACGAAAT
GGTTCAGTCAAGTCGAATGGTTTTAATTCCACAAAAACAAATAGTTCTTTCTCAAGCAAA
AACTCGACCGTACTCTTTAACCCAAAGAGTCGACCAGCTACTGCCATGTCAAATCCTCCA
AAGTCTTTCCATCAAGCTCAGCCTTTTAATCCAGTGAACAAGTTTCAGTCCGATGTCCAG
TCTGGAGGCCTGATGAAGGGGTTTCATCTGGTTGGGGACTACCCATCATACACGAGTCAG
AATCAAGGTTTTTTCATGCCTTATGATCCCATCAACTGTCAAACAAACAGTAGAATGTGG
AATGGAAACTACAGAGCTAAACCACGGGGAAATTTCACCAGAAATGGTGTGTTTGAGGCA
ACTAATGAGTTACCTCGTGGTCCCCGTGCCAACGGTAGAAGTGTCCCTTCAAAACCATCT
GCTGAGGAGGATCAGCTTGTGCCAGCTGTTCAGAGGGAGAAGTATAACAAGGAGGATTTT
AAGACTCAGTATGACAATGCAAAATTTTACATTATCAAGTCATACAGTGAAGATGATATC
CACAAGTGTGTCAAATATGATGTGTGGTCAAGTACTCCAAATGGAAACAAGAAATTGGAC
ACTGCCTTTGTTGAATCTGAGGCTAAAGCAAGTGGAACTGGTTCAAGCTGTCCAGTGTTC
CTCTTCTTTTCTGTAAATGGAAGTGGACAGTTTTTAGGTGTAGCTGAGATGGTTGGGCAG
GTTGACTTCAACAGAAACATGGACTTTTGGCAGCTTGATAAGTGGAGTGGGTTCTTCCCA
CTGAAGTGGCACATAGTTAAAGATGTACCAAATACACAGTTCAGGCACATCATCCTTGAA
AACAATGATAATAGACCTGTAACCTATAGCAGAGATACACAGGAGATTGGATTGAAGGAA
GGTTTGGAAATGCTTAACATACTTAAGAATTACTCAGAGAAGACATCTATATTGGATGAT
TTCAATTTCTATGAGAAGCGTGAGAAAGTGCTCAAGGCTAAAAGGAGTTCAAAACCAGTT
ATTCAAGCTGATGCATACGAGAAAGCTGATTCTCTTAAGCAATTCAAAGGAGGAGACAAG
GTACTCGAGGAGGAGCTGAAGACCAACTCTACTGATCCAACTGCACCTTTGGTTTCTCTC
ACCAAAAACCTATCGATTAATTCAAGGCCATTCAAAAGTAGTGTCTGA

Peptide Sequence

PEP ID

Solyc01g103540.3.1
PEP Infomation

evolutionarily conserved C-terminal region 2 (AHRD V3.3 *-* AT3G13460.4)
Sequence

MAGEKIIEKPEAVAPGLKSDPSNKLIEKDLVSKKDGKAADSVASLGAVTSIKCENDQPPA
AEQGYNGTYNQLDEQAYFNAGVQSDNGSLLYYMPGYNPYSAGFVGGDGKQPYPSSGYLQQ
PVSYGSDSMPCYTWGSPYCADITNSAAPKSGNVKSTFGRNGSVKSNGFNSTKTNSSFSSK
NSTVLFNPKSRPATAMSNPPKSFHQAQPFNPVNKFQSDVQSGGLMKGFHLVGDYPSYTSQ
NQGFFMPYDPINCQTNSRMWNGNYRAKPRGNFTRNGVFEATNELPRGPRANGRSVPSKPS
AEEDQLVPAVQREKYNKEDFKTQYDNAKFYIIKSYSEDDIHKCVKYDVWSSTPNGNKKLD
TAFVESEAKASGTGSSCPVFLFFSVNGSGQFLGVAEMVGQVDFNRNMDFWQLDKWSGFFP
LKWHIVKDVPNTQFRHIILENNDNRPVTYSRDTQEIGLKEGLEMLNILKNYSEKTSILDD
FNFYEKREKVLKAKRSSKPVIQADAYEKADSLKQFKGGDKVLEEELKTNSTDPTAPLVSL
TKNLSINSRPFKSSV*

Transcript Sequence

Transcript ID

Solyc01g103540.3.1
Transcript Infomation

evolutionarily conserved C-terminal region 2 (AHRD V3.3 *-* AT3G13460.4)
Sequence

AACAAACACTACTTTCTATATATAGATATTTATCAAAAAATGGCATTGCACAATGAAGAA
TATTTTAAATTAAATGTCATGTGTTTCATTCTAATGCACATACTTTCCCTTTCTCATTAA
ATCCAATTTTTTATTTTAGGGGAAAAAACAAAGATGTCAATATACCACTAACAATCAAAC
CTAATATTTACAACGACTTCTATATTTTTTTCTATCTAATTCTTTAATTCAAACAATTTA
AAATTATCCCAAAATCCAATTTAATTTTCTAAAATATCTCCTTCAATAATACAAATAAAA
ATCCATAGATATTTTTTATTTCATAATAATAATATTAAAAAAAAAGTAAACAACTGGACT
CTTCCAAATAGTGCTCGTCCACAATTCAAATGAATTTAAAAAAAAAAAAACACAAAAGAA
TCTTGAGTACCAGTCATTGACTATAAAATTAACGGTCCAGATGAGTTGATACCAAATCAA
GAAACGAATATAAGCCGTTAGATTAAAATTAAGGGTTTAGTCACAGTTCCTTTTCACTCC
ACGCCTCCTATTATACACTCACGCAGTCCTCTTTACATTCTTCCTCTTTCGTTTCCCTCA
AAAACCTTCGCTACAGGGAAACCGCTTCTCTGTTTCATAGCGGTTTTCCGGTTATCTGGA
TCGGTGGTTTTGTTTATTTGCTTATATAAGGTCAGGAATTGGCTTTTGAAGCTTGATAAT
GGCTGGTGAGAAGATTATAGAAAAACCTGAAGCTGTTGCTCCGGGACTGAAATCTGATCC
CTCTAACAAACTGATTGAGAAGGATTTGGTTTCAAAAAAAGATGGAAAAGCTGCTGACTC
GGTGGCTTCTTTGGGAGCTGTGACCAGCATCAAGTGTGAAAATGATCAACCACCTGCTGC
AGAGCAAGGATATAATGGGACTTATAATCAGTTAGATGAGCAGGCTTACTTTAATGCGGG
TGTTCAATCAGACAATGGTTCCCTTCTCTACTATATGCCTGGCTATAATCCTTACAGTGC
TGGATTTGTGGGAGGCGATGGGAAGCAGCCCTATCCTTCGTCCGGATATCTCCAGCAACC
TGTCTCATATGGTTCAGATTCCATGCCATGTTATACATGGGGCTCGCCATACTGTGCTGA
TATCACCAATAGTGCTGCTCCAAAATCCGGGAACGTTAAATCAACTTTTGGACGAAATGG
TTCAGTCAAGTCGAATGGTTTTAATTCCACAAAAACAAATAGTTCTTTCTCAAGCAAAAA
CTCGACCGTACTCTTTAACCCAAAGAGTCGACCAGCTACTGCCATGTCAAATCCTCCAAA
GTCTTTCCATCAAGCTCAGCCTTTTAATCCAGTGAACAAGTTTCAGTCCGATGTCCAGTC
TGGAGGCCTGATGAAGGGGTTTCATCTGGTTGGGGACTACCCATCATACACGAGTCAGAA
TCAAGGTTTTTTCATGCCTTATGATCCCATCAACTGTCAAACAAACAGTAGAATGTGGAA
TGGAAACTACAGAGCTAAACCACGGGGAAATTTCACCAGAAATGGTGTGTTTGAGGCAAC
TAATGAGTTACCTCGTGGTCCCCGTGCCAACGGTAGAAGTGTCCCTTCAAAACCATCTGC
TGAGGAGGATCAGCTTGTGCCAGCTGTTCAGAGGGAGAAGTATAACAAGGAGGATTTTAA
GACTCAGTATGACAATGCAAAATTTTACATTATCAAGTCATACAGTGAAGATGATATCCA
CAAGTGTGTCAAATATGATGTGTGGTCAAGTACTCCAAATGGAAACAAGAAATTGGACAC
TGCCTTTGTTGAATCTGAGGCTAAAGCAAGTGGAACTGGTTCAAGCTGTCCAGTGTTCCT
CTTCTTTTCTGTAAATGGAAGTGGACAGTTTTTAGGTGTAGCTGAGATGGTTGGGCAGGT
TGACTTCAACAGAAACATGGACTTTTGGCAGCTTGATAAGTGGAGTGGGTTCTTCCCACT
GAAGTGGCACATAGTTAAAGATGTACCAAATACACAGTTCAGGCACATCATCCTTGAAAA
CAATGATAATAGACCTGTAACCTATAGCAGAGATACACAGGAGATTGGATTGAAGGAAGG
TTTGGAAATGCTTAACATACTTAAGAATTACTCAGAGAAGACATCTATATTGGATGATTT
CAATTTCTATGAGAAGCGTGAGAAAGTGCTCAAGGCTAAAAGGAGTTCAAAACCAGTTAT
TCAAGCTGATGCATACGAGAAAGCTGATTCTCTTAAGCAATTCAAAGGAGGAGACAAGGT
ACTCGAGGAGGAGCTGAAGACCAACTCTACTGATCCAACTGCACCTTTGGTTTCTCTCAC
CAAAAACCTATCGATTAATTCAAGGCCATTCAAAAGTAGTGTCTGAATCATAGGTTGCCT
CCAAGAGGCATTTTATGACTAGGTAGACCTGAAGCTTCAAAAGGGGTCCTTGTTTCTTCT
TTTTGTGTTTAATTAGCTTTATAGGCATACACTCGTCCCGCTGTGCCCGGCTTTTGGGAT
GGCATTTACTTACTAGTCTCTATTAGTTTTGCTTCATCTTTAAAGGGTTCTGTTTCTTTT
CTTTTGACTTTGCAATGTTTGTTTACTTTCAAAAGATCTCTACTTTTGTTTTAGATTATT
GCAGTATTGATAATGTTAAAAGAAAAAGTTGCCCCCATCTCCCTGTCTACTCTACTTCAA
TTTGGCATCAGAGTCAGAATTAACTTCTAGTGTTATCATAATCAAGTTTGTCACTATGAA
ATTTTGC