Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g103490.3.1
CDS Infomation	MACPF domain-containing protein (AHRD V3.3 *** A0A0B2S5Z8_GLYSO)
Sequence	ATGGCGTTGAAGTTATCTGCTGCTGAAGCAGCTAAGGTTGCGATTCAGTCTATAGGATGT GGATATGATATATCATTGGATTTGAGGCTCAAGTATTGTAAAGGTCATCCAGATAATAGT CGTTTAATTGAAATTGATGAAAATGAGAGTGGGGAGGTTGTGCTTCCTGGTGGAATTTCA ATACCTAATGTGTCAAAATCTATCAAATGTGATAAAGGAGAACACACACGGTTTGGCTCT GATGTTCTTTCTTTCCAGCAGATGTCAGAGCAGTTCAATCAGGAAGTATCCGTGAATGGT AAAATTCCTTCGGGGCTCTTCAATACTATGTTCGAGTTTTCTGGTTCTTGGCAGAAGGAT GCTGCATACACTAAAACCCTTGCTTTTGATGGTGTGTTCATCACGTTGTACTCTGTTGCT CTAGAAAAATCTCAAATGGTGCTGTGTGATTATGTTAAAAAGGAAGTTCCATCAACATGG GATCCTGCAGCATTAGCAAGGTTTATTGAAAAATTTGGTACTCATGTCATTGTTGGTATA AAGATGGGGGGAAAAGATGTAATATATATGAAACAACAGCACTCCTCATCGCTTCTGCCC GCTGACGTGCAAAAACGTTTGAAGACAATGGCAGATAAGAGGTTTTCAGGTGCAAATGAA CAAGGGGGAGTAGAATCGCAGCAGACACATCAGAATGAGAAGTTTGAAATCAGGGAGCAC CGACTGAGGTTTGCCGATCCCAATATATCAGGTTCATATGCACATAAGGAGGATACTGTT TGTATTTGCAAGAGGAGAGGTGGAAGTGATAGCAGAGGCCTGATGCATAATCAGTGGTTA CAAAGTGTTGATCAGGAGCCTGATGTGATCTCAATGTCCTTCATTCCTATAACTTCACTG TTGAATGGCATCTCAGGAAGTGGATTTTTAAGTCATGCTATAAATTTGTACTTACGCTAT AAACCACCAATTGAAGAGCTTCACCAGTTTTTGGAATTTCAGCTGCCAAGGCAATGGGCA CCAGTATTCGGTGATCTTCCGCTTGGTCCACAGAGAAGGCATTTAAGTTTTCCGTCTTTG CAGTTCAGTTTACTGGGTCCCAGGCTTTATGTGAACACCACTCCGGTTGATGTTGGCAAG AGGCCGGTGACTGGACTTCGTTTGTACCTTGAAGGTAGAAGGAGTAACCGCTTAGCCGTC CATTTACAGCATCTTTCATCTCTTCCTAAAGTCTTCCAACTTGAAGATGATCCAAAAGGC AACTTTCGCCGAGAATCATATGATCGCAAATACTATGAAAAAGTTCAATGGAAGAACTTT TCTCACGTTTGCACCGCACCTGTTGAATCTGATGAAGACCTTAACATAGTTACTGGAGCA CAATTGGAATTAGGGGATTATGGGTTTAAAAAGGTCCTCTTTCTGAGACTCCGTTTCTCG ACTGTCATGGGAGCTACTATGGTAAAGCACGCTGAGTGGGATGGTTCCCCTGGGTTGGCT CGCAAATCTGGCCTGATATCAACTCTCATTAGCCAGCACTTTACATCAGTTCAGAAGCCA CCTCCTCGGCCAGATGATGTGAACATAAATTCTGCCATTTACCCTGGTGGTCCTCCAGTT CCTGTGCAAGCCCCTAAGCTCTTGAAATTTGTCGATACTACTGAGATGACTCGAGGACCA CAGGAACCTCCTGGTTATTGGGTTGTTTCAGGTGCAAGGCTTATGGTTGAGAAAGGAAGG ATCTCTGTGAGGGTCAAATATTCCTTGCTAACTGTAATACAACCCGATGATGAAATATCA GAGTAA

Peptide Sequence

PEP ID	Solyc01g103490.3.1
PEP Infomation	MACPF domain-containing protein (AHRD V3.3 *** A0A0B2S5Z8_GLYSO)
Sequence	MALKLSAAEAAKVAIQSIGCGYDISLDLRLKYCKGHPDNSRLIEIDENESGEVVLPGGIS IPNVSKSIKCDKGEHTRFGSDVLSFQQMSEQFNQEVSVNGKIPSGLFNTMFEFSGSWQKD AAYTKTLAFDGVFITLYSVALEKSQMVLCDYVKKEVPSTWDPAALARFIEKFGTHVIVGI KMGGKDVIYMKQQHSSSLLPADVQKRLKTMADKRFSGANEQGGVESQQTHQNEKFEIREH RLRFADPNISGSYAHKEDTVCICKRRGGSDSRGLMHNQWLQSVDQEPDVISMSFIPITSL LNGISGSGFLSHAINLYLRYKPPIEELHQFLEFQLPRQWAPVFGDLPLGPQRRHLSFPSL QFSLLGPRLYVNTTPVDVGKRPVTGLRLYLEGRRSNRLAVHLQHLSSLPKVFQLEDDPKG NFRRESYDRKYYEKVQWKNFSHVCTAPVESDEDLNIVTGAQLELGDYGFKKVLFLRLRFS TVMGATMVKHAEWDGSPGLARKSGLISTLISQHFTSVQKPPPRPDDVNINSAIYPGGPPV PVQAPKLLKFVDTTEMTRGPQEPPGYWVVSGARLMVEKGRISVRVKYSLLTVIQPDDEIS E*

Transcript Sequence

Transcript ID	Solyc01g103490.3.1
Transcript Infomation	MACPF domain-containing protein (AHRD V3.3 *** A0A0B2S5Z8_GLYSO)
Sequence	TCACTCAACTCCTGTCACTGTTAAAATCTCCATTATCATACAAAAAGCAAAAATCCTAAA AAGAGTTAAAAGAACATTAAAATACAGAGTTTCCATATCAAGCGCATTAACCTCAAAATC GTCTTCTGAAAATTCATCGCCGTCGTCTTCAAAGCTCTTCTCTAGATCTGAGCTTTGCTT CAAAGTCAAATACCAAATCTTCGGATCTCCAACTCTCCATTTCGATACACACCTCTGCTA GGGTTTCGAGTCCGTACTAGACTGAAATGCTCGCCGATTCATGACGGAGGTTTTTCGAGT ACTTGCGTGATTCTAGGGTTTCAGTGTGTGGTTGATTTGGTGCAAAACGAGTATCCTCGA TATAATTTTTCAAATTTCTAGATTGATACTTCAAGTTCCGAAACTTTCAGTTAGTTACAG CTGTATTTTGACCAGTCTAGGAACACGCAGGGGCTTTTTCTTTTACACGGTTCATTTATA GGTTGAACATTTCTGTAACTTGAAGTCGGTTTTTGATAGTAGAAGAATGTTGTGACAAAT GGCGTTGAAGTTATCTGCTGCTGAAGCAGCTAAGGTTGCGATTCAGTCTATAGGATGTGG ATATGATATATCATTGGATTTGAGGCTCAAGTATTGTAAAGGTCATCCAGATAATAGTCG TTTAATTGAAATTGATGAAAATGAGAGTGGGGAGGTTGTGCTTCCTGGTGGAATTTCAAT ACCTAATGTGTCAAAATCTATCAAATGTGATAAAGGAGAACACACACGGTTTGGCTCTGA TGTTCTTTCTTTCCAGCAGATGTCAGAGCAGTTCAATCAGGAAGTATCCGTGAATGGTAA AATTCCTTCGGGGCTCTTCAATACTATGTTCGAGTTTTCTGGTTCTTGGCAGAAGGATGC TGCATACACTAAAACCCTTGCTTTTGATGGTGTGTTCATCACGTTGTACTCTGTTGCTCT AGAAAAATCTCAAATGGTGCTGTGTGATTATGTTAAAAAGGAAGTTCCATCAACATGGGA TCCTGCAGCATTAGCAAGGTTTATTGAAAAATTTGGTACTCATGTCATTGTTGGTATAAA GATGGGGGGAAAAGATGTAATATATATGAAACAACAGCACTCCTCATCGCTTCTGCCCGC TGACGTGCAAAAACGTTTGAAGACAATGGCAGATAAGAGGTTTTCAGGTGCAAATGAACA AGGGGGAGTAGAATCGCAGCAGACACATCAGAATGAGAAGTTTGAAATCAGGGAGCACCG ACTGAGGTTTGCCGATCCCAATATATCAGGTTCATATGCACATAAGGAGGATACTGTTTG TATTTGCAAGAGGAGAGGTGGAAGTGATAGCAGAGGCCTGATGCATAATCAGTGGTTACA AAGTGTTGATCAGGAGCCTGATGTGATCTCAATGTCCTTCATTCCTATAACTTCACTGTT GAATGGCATCTCAGGAAGTGGATTTTTAAGTCATGCTATAAATTTGTACTTACGCTATAA ACCACCAATTGAAGAGCTTCACCAGTTTTTGGAATTTCAGCTGCCAAGGCAATGGGCACC AGTATTCGGTGATCTTCCGCTTGGTCCACAGAGAAGGCATTTAAGTTTTCCGTCTTTGCA GTTCAGTTTACTGGGTCCCAGGCTTTATGTGAACACCACTCCGGTTGATGTTGGCAAGAG GCCGGTGACTGGACTTCGTTTGTACCTTGAAGGTAGAAGGAGTAACCGCTTAGCCGTCCA TTTACAGCATCTTTCATCTCTTCCTAAAGTCTTCCAACTTGAAGATGATCCAAAAGGCAA CTTTCGCCGAGAATCATATGATCGCAAATACTATGAAAAAGTTCAATGGAAGAACTTTTC TCACGTTTGCACCGCACCTGTTGAATCTGATGAAGACCTTAACATAGTTACTGGAGCACA ATTGGAATTAGGGGATTATGGGTTTAAAAAGGTCCTCTTTCTGAGACTCCGTTTCTCGAC TGTCATGGGAGCTACTATGGTAAAGCACGCTGAGTGGGATGGTTCCCCTGGGTTGGCTCG CAAATCTGGCCTGATATCAACTCTCATTAGCCAGCACTTTACATCAGTTCAGAAGCCACC TCCTCGGCCAGATGATGTGAACATAAATTCTGCCATTTACCCTGGTGGTCCTCCAGTTCC TGTGCAAGCCCCTAAGCTCTTGAAATTTGTCGATACTACTGAGATGACTCGAGGACCACA GGAACCTCCTGGTTATTGGGTTGTTTCAGGTGCAAGGCTTATGGTTGAGAAAGGAAGGAT CTCTGTGAGGGTCAAATATTCCTTGCTAACTGTAATACAACCCGATGATGAAATATCAGA GTAATTTAGAAGAGGTTCTCTTTTATTCATACTCAAAACAATGCAAATGCTACAGGGAGA AGTTGCAGTGTAGTTTGTTGCTGGCTTTCTTGATGTTGAAACACCTGTTGTACAAAATCT GGCGGAAGTGCCAAAAAAGGGGATGAAGCAACTGTTCTCTACTTTGAGATGTCTCTAATC TTTGTTCTGATTTTGTTTGCGCTTAAATGTAAATCATGACAATATTGATTGTAATATAAT TCTCACTTCTCCAAAAAATCTCTTTGAACCTCTTTCCTATGCTCACTATGATGTTTAACC AATTAGGGAAGTCACAATTGTTTGATTGATTTCAGATTTATGCACAAAACATTAGCCATG TTTCCTAGAATTAGCATCAAGTGACACAAAACTGCTGGAAATAGAAAGAAGTGCATAAGC TCAATAGTCAAAAGACAATACATGGTAAAATAAGCTTACCTCAAAGCAACAAACTAAAAA CTCAACCTACTGAACTTCCCAGATCATCCCCACATCTCACATATTGGAAAAGACAATACA GAAAGAGGGGAACTCAGTCAATATACAAAGCAAAAAAACCAAATATGTCACACAAAAACA ATGAATGTCCCTTCTTCCCAATGTTCCAAACTTCAGTTTTCGCCCGACAGCTAATTTTAC AGGTCTGAGCATATGGTAAGAGAGTGCTAGATTCTGCAATTGTTGAACTTTTTTTATGGT CACATTAGGATTCATAAATATGATAATACAATAATTAGTCTTGTAGAATCATTAAGAGAA GGGAAAACTATGTTCATGGGAAGGCCAATAAACCCCTTCCCTTGGACAAGCCAATGGAGT TGGCTTAGCAATGAAGGTAGGATACTGTTGTCCTGGCATCATAACTGTATAATCCGATGA ATATCGCGTTGGTACCTGTTCATACAAAAGATGATCATTTTAAGATTAAATCAAGTGGAG GGAATGATGTTTGAACCAAAAAAAAAAGAAAATGCTCCACACTTACTGTTTCTGAACTTG CACGTTTCTGAATAGGCCCCAACTCCAAGGAACTGTGTCTACTACCTAGAGGCGAAGAGA AAGGAGGGCTAGGTTTGAATAGATGTTCAAATATGGCCATGATGAGAAACATGGATATGA GTATAGCTGTAGCAACAAAGCCAAAAGAAATAGCATCCATTGATGTCCCGAAATTCTTCC ATTGTCCTTCTCTGTTTACTTGTGTTTGGGAAGGACTAGGTTCTGAACTTGTGTGAATAT TGTTCCATGGATTTGATCTTTCTGAACCAACCTCACTCATATTCGTATCCACGTATTTCA TTGATCA