Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g103480.3.1
CDS Infomation

Coatomer subunit delta (AHRD V3.3 *** W9SBM6_9ROSA)
Sequence

ATGGTTGTTCTAGCGGCTTCCATAATTTCTAAATCTGGCAAAGCTCTTGTCTCGAGGCAA
TTTGTTGATATGTCTCGTATAAGAATTGAAGGATATCTTGCAGCTTTTCCCAAATTGGTT
GGTATAGGAAAGCAGCATACATATATTGAGACTGAAAATGTGCGATATGTTTATCAGCCG
ATAGAATCTCTGTACTTGCTCCTTGTGACCAACAAACAGAGCAACATTCTTGAAGATTTG
GAGACACTGAGGCTGCTGTCTAAACTAGTGCCTGAATATTCTTATTCACTAGATGAGGAA
GGAATTGGCAGGACGGCTTTTGAGCTTATTTTTGCATTTGATGAAGTGATCTCTCTTGGG
CACAAGGAAAATGTTACAGTTACACAAGTCAAGCAGTACTGTGAAATGGAGAGTCACGAG
GAGAGATTACACAAGTTAGTCTTACAGAACAAGATAAATGAAACTAAGGATGTCATGAAG
CGTAAAGCCAGTGAAATTGACAAAAGCAAGATTGAGAGGAATAGAGGTGACAAAGGAGGT
TTCATGTCACTGCAATCCATGAGTTCTGGAAGAATTGATACTGGCTTTGGCAGCGACTCA
GGCATATCCAACATAGGAGGCAATGGTTCTGGTGGATTTGCTCTACCCCCTGATGTGGAC
ACATTTTCCACCAAATCCAAGGGTCGTCCAGCTGCATCTGCTACTGCTCCACCGAAAGGT
CTTGGTATGCAACTGGGTAAAACACAGAAGACCAACCAATTTCTGGAATCCCTAAAAGCT
GAGGGTGAGGTAATTGTCGAGGATGTGAGGCCAAGCGTTGGTCAGGCCAAACCAGCTGCT
GCTCCACTAACTGATCCCGTCACGTTGACTGTTGAAGAGAAGATAAATGTAACACTAAAG
CGTGATGGTGGTCTCAGCAATTTTGTCGTCCAGGGTACTTTGTCTCTCCAAATTCTGAAC
CAAGAAGATGCTTTTATCCAAGTGCAGATTGAAACCAGTGGTAATCCAGCAATCCTCTTC
AAAGCACACCCAAACATGAACAAGGAGTTGTTTGCAAATGAAAATATTCTTGGCCTTAAA
GATCCCAATAGGTCATTTCCCACAGGGCAAGGTGGTGATGGTGTTAGTCTTTTGAGGTGG
AGAATGCAAAGCACAGATGAGTCAATTTTGCCTTTGACAATTAACTGCTGGCCTTCAGTT
TCTGGAAGTGAAACCTATGTGAATATCGAGTATGAAACCCCCGCGCAGATTGATTTACAA
AATGTTGTAATTTCTGTACCCCTTCCAGCTCTCAGGGAGGCTCCAAATGTACAACAGATT
GATGGAGAGTGGAGGTACGATTCCAGAAATTCTGTTTTGGAGTGGTCTGTTCTTCTCATT
GACAATTCGAACCGCAGTGGATCACTAGAGTTTGTTGTTCCAGCTGCTGATCCATCAGCA
TTCTTTCCAATTTCTGCACAGTTTACTTCTTCGAGAACCTTCAGTGATGTGAAGGTTGTC
AACGTGCTGCCTCTAAAAGGTGGGGCCACTCCCAAGCATTCTCAAAGAACACTGCTGGCC
ACGGAGAGTTACCAGGTTGTGTGA

Peptide Sequence

PEP ID

Solyc01g103480.3.1
PEP Infomation

Coatomer subunit delta (AHRD V3.3 *** W9SBM6_9ROSA)
Sequence

MVVLAASIISKSGKALVSRQFVDMSRIRIEGYLAAFPKLVGIGKQHTYIETENVRYVYQP
IESLYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGIGRTAFELIFAFDEVISLG
HKENVTVTQVKQYCEMESHEERLHKLVLQNKINETKDVMKRKASEIDKSKIERNRGDKGG
FMSLQSMSSGRIDTGFGSDSGISNIGGNGSGGFALPPDVDTFSTKSKGRPAASATAPPKG
LGMQLGKTQKTNQFLESLKAEGEVIVEDVRPSVGQAKPAAAPLTDPVTLTVEEKINVTLK
RDGGLSNFVVQGTLSLQILNQEDAFIQVQIETSGNPAILFKAHPNMNKELFANENILGLK
DPNRSFPTGQGGDGVSLLRWRMQSTDESILPLTINCWPSVSGSETYVNIEYETPAQIDLQ
NVVISVPLPALREAPNVQQIDGEWRYDSRNSVLEWSVLLIDNSNRSGSLEFVVPAADPSA
FFPISAQFTSSRTFSDVKVVNVLPLKGGATPKHSQRTLLATESYQVV*

Transcript Sequence

Transcript ID

Solyc01g103480.3.1
Transcript Infomation

Coatomer subunit delta (AHRD V3.3 *** W9SBM6_9ROSA)
Sequence

TCCTAAGGAAAAACTACTACAATAATAAATGTAAATTTGCAAAATTAGAAAAAGTTTTCG
AACTTGCTTCAATTTTAATTAAAAGGGAGCCGGAAGAAAAACAAGTAGTGTCGTCGCACC
GTAAGATCTTGAACTCCCGGGTCATATATAAGTTCGTGGAGCGCCTATATTCTCTTCACC
ATCTCATTACTCTGTAAGCATTCTTCAATCTTCAATCTTCAGTAAGGTGGTATACGATCT
ATTGCCCAGGATCTGATACAACAAAATCTACTAAGCAACAAAGATGGTTGTTCTAGCGGC
TTCCATAATTTCTAAATCTGGCAAAGCTCTTGTCTCGAGGCAATTTGTTGATATGTCTCG
TATAAGAATTGAAGGATATCTTGCAGCTTTTCCCAAATTGGTTGGTATAGGAAAGCAGCA
TACATATATTGAGACTGAAAATGTGCGATATGTTTATCAGCCGATAGAATCTCTGTACTT
GCTCCTTGTGACCAACAAACAGAGCAACATTCTTGAAGATTTGGAGACACTGAGGCTGCT
GTCTAAACTAGTGCCTGAATATTCTTATTCACTAGATGAGGAAGGAATTGGCAGGACGGC
TTTTGAGCTTATTTTTGCATTTGATGAAGTGATCTCTCTTGGGCACAAGGAAAATGTTAC
AGTTACACAAGTCAAGCAGTACTGTGAAATGGAGAGTCACGAGGAGAGATTACACAAGTT
AGTCTTACAGAACAAGATAAATGAAACTAAGGATGTCATGAAGCGTAAAGCCAGTGAAAT
TGACAAAAGCAAGATTGAGAGGAATAGAGGTGACAAAGGAGGTTTCATGTCACTGCAATC
CATGAGTTCTGGAAGAATTGATACTGGCTTTGGCAGCGACTCAGGCATATCCAACATAGG
AGGCAATGGTTCTGGTGGATTTGCTCTACCCCCTGATGTGGACACATTTTCCACCAAATC
CAAGGGTCGTCCAGCTGCATCTGCTACTGCTCCACCGAAAGGTCTTGGTATGCAACTGGG
TAAAACACAGAAGACCAACCAATTTCTGGAATCCCTAAAAGCTGAGGGTGAGGTAATTGT
CGAGGATGTGAGGCCAAGCGTTGGTCAGGCCAAACCAGCTGCTGCTCCACTAACTGATCC
CGTCACGTTGACTGTTGAAGAGAAGATAAATGTAACACTAAAGCGTGATGGTGGTCTCAG
CAATTTTGTCGTCCAGGGTACTTTGTCTCTCCAAATTCTGAACCAAGAAGATGCTTTTAT
CCAAGTGCAGATTGAAACCAGTGGTAATCCAGCAATCCTCTTCAAAGCACACCCAAACAT
GAACAAGGAGTTGTTTGCAAATGAAAATATTCTTGGCCTTAAAGATCCCAATAGGTCATT
TCCCACAGGGCAAGGTGGTGATGGTGTTAGTCTTTTGAGGTGGAGAATGCAAAGCACAGA
TGAGTCAATTTTGCCTTTGACAATTAACTGCTGGCCTTCAGTTTCTGGAAGTGAAACCTA
TGTGAATATCGAGTATGAAACCCCCGCGCAGATTGATTTACAAAATGTTGTAATTTCTGT
ACCCCTTCCAGCTCTCAGGGAGGCTCCAAATGTACAACAGATTGATGGAGAGTGGAGGTA
CGATTCCAGAAATTCTGTTTTGGAGTGGTCTGTTCTTCTCATTGACAATTCGAACCGCAG
TGGATCACTAGAGTTTGTTGTTCCAGCTGCTGATCCATCAGCATTCTTTCCAATTTCTGC
ACAGTTTACTTCTTCGAGAACCTTCAGTGATGTGAAGGTTGTCAACGTGCTGCCTCTAAA
AGGTGGGGCCACTCCCAAGCATTCTCAAAGAACACTGCTGGCCACGGAGAGTTACCAGGT
TGTGTGACCACAAGGACATTATAAAATTGTGCCGTTACAGCAAACATTATAGGGCTTGTT
TTATTTCATTTTTGTTCAGACTTTTGTTTGCCCTTTTCCTTGTTATCCTTTCCCAAAGTT
CTTTCATGTACGGAGATGGAATAACTTTGTTAGGTTGAACTTAGAAAGTCTTGTGCATTT
ATAGCGTACGCCGATCAACTTACTTTTGCGCAATTGAATTGAACCAAAATTTGAAGCTTC
ACTGTTTTCTTTATTTGTTCTATTATTTCTTATTCGTTTTTTCTCACGCCTCGTTGGTCA
TTGAAAATGTTCTTTGTTTACTACTAACCTTAAGTAGAACAAC