Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g103160.3.1
CDS Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103YL86_CYNCS)
Sequence	ATGGCACTGTATGCCATACTCCTCCGCTCTCTCCGCCGTTCCTCCGCCACTGTCGCCGCC GTCAGAACTCAAATCACAACATCCGTTCACAATCCTCAAAACCCTAATTTCCTTCTACCT CATCGATCATTTGCTTTTTCATCTGCGGAAGAAGCCGCTGCTGAACGGAGGCGTCGGAAG AGGCGACTTCGTATTGAACCACCAATCAATGCCCTACGCCGTGATCCACTACCCAGGGGA CCGCCTTCTCCGGATGATCCTCGATCCCGTCTTCCTGATACCACCTCAGCGTTGGTGGGC CCTCGGCTTAACCTGCACAATCGCGTTCAATCTCTTATACGTGCTGGTGATTTGGACGCT GCAGCTGCTGTTGCTCGTCACGCCGTCTTCTCAAACACACGGCCGACTGTATTCACATGT AATGCTATCATCGGTGCTATGTATCGGTCCGGACGGTATAATGATGCTAAGGCACTGTTT CAGTACTTTTTCAATCAGTATAATATTATTCCGAACGTTGTTTCATACAATCATGTAATT GTGTCACATTGTGAAGCTGGTGAGGTTGATGAAGGCTTGAAAGTATACAGTCATATTATT GAAAATGCGCCTTTTAGTCCGTCTGCTGTGACATATCGCCATCTTACCAAGGGATTAATT GATTCTGACCGTATAGCTGAAGCTGTGGATTTGCTTAGGGAAATGCTTAATAAAGGACAT GGTGCGGATTCCTTAGTTTATAATAATTTGATATTGGGGTTCTTGAATTTGGGTAATTTA GAGAAAGCAAATGAACTGTTTGATGAGTTGAAAGAAAGGTGCACTGTTTATGATGGGGTG GTGAATGCTACTTTTATGGACTGGTTTTTCAAGCAGGGGAAGGTAAAAGAGGCTATGGAA TCATATCGATCACTTCTTGATAAGAAGTATAGGATGGTTCCTGCAACTTGTAATGTGTTG TTGGAGGTGTTGTTGAGGCATGGGAGGGAAACTGAGGCATGGGCATTGTTTGATGCAATG TTGGATGATCACACGCCACCAACATTCCAGGCTGTGAATTCCGACACTTTTAATTTAATG GTGAATGAGTGTTTTAGGCTAGGAAAGGTTTCAGAGGCATTGGAGACCTTCAAGAAGGTG GGGAAGGGCCTCAAGACCAGACCTTTTGCAATGGATGTTGCAGGTTACAATAATATGATA ACAAAACTTTCTGAGCTTGAAATGATGGAGGAAGCAGAAAAATATTATATGGAGTTGTGT AACAAGTCATTGAGCCCAGATGTCACAACTTATAGGACAATGATTGAGGCATATGTGAAG ATGGATAATGTCGAAGGCACACTGGAGAAGTACACAAAGATGGTGGAGGCAGGGCTGAGA GTCATTCCAGTCTATGCTGAGAAGTGGTTTAATTTCTTGATTGAGAAAGGCAAGGTTGCA GAGTGCGTGCCTATTCTCACCAAGATGGGTGAGAGAGAACCAAAACCTGACGTGACAACT TATGATATTGTGATTAGGGCACTCTGTGAGGAAGGTAATTATGATGCTAGTTCCAATTTA GTTATTCAAACAATAAACTATGGTGTTGGTCTCACCAGTTCCCTCAGAGAGTTCCTGTTA GAAAGTTTTGGTAACCAAGGTCGTCGTGAGGAGATTGAAAGAGTTTTTGCTACTAAACCT ACATACTCTCCACCTTCTACACCACCTCGAGGACAAGTTCCATGGCTTTCACAATTGCCT AGACAATTACCAGGAACTTCTCGTGCTGCAGGACAACAGACATCACCTGCTTCTTTATCA TCACAAGTGCAAGGTCGGCCTTCAGCTCTTAATTCAACGTGGCCTCCCTCATTCATTGGA GGACAGCAACAAGCTTCATCACCTTCTTTCATTGGAGGACGAGGATCATCACAAATGCAA GGCCAGCAGTCGGCACCTAACCCAAGGTGGCAACAAGCTTCACCACCATCTTTTGTAGCT GGACAAGGATCACATCAACTGCAAGGCCAGCAGGCAGATCCTAATCCAAGGTGGCAACAA GCTTCACCACCCACTTTTGTTGCTGGACAAGGGTCACATCAAGTTCAAGGCCAGCAGTCA GCACCTAATCCGAGGTGGCAACAAGCTTCACCACCCTCTTTTACTGCTGGGCAAGGATCA CAGCAAATGCAAGGCCAGCAGTCAGAACCTAATCCAAGGTGGCAACAAGCTTCACCACCC TCTTTTGTTGCTGGACAAGGATCACATCAAATGCACGGCCAGCACTCAGCACCTAATCCA AGGTGGCAACAAGCTTCACCACCCTCTTTTATTGCCGGACAAGTACCGCAGCAAATGCAA GATCAGCCATCAACATTTGCAAGAAATTCACATCAGGCATCACCTTCTTTTATTCAACAC GGAGCTTCACCACCGTCTTTCATGGCTGGACAAGGATCGCAGCAGATGCAAGGTCAGCCA TCAGCTTTTGCAAGAAACGTGCAACAAGCATCTCCACCTTCTTTCGTGCCCCAACAAGAT GCTTCAGCGCACTCTTTCATGGGATCACAGCAAATGCAAGGTCGCCCATCAGGTTTCACG CAGGGTTCACAATGGTCATCTGCACCCTCTTATATGGCAGGACAAGGAGGACAGCATCAA AATCAAGGTCAGCCATCAGGTTTCACACAAACTCCTTATAAGGCATCACCTTATTCCATG GATGGACAAAGAACCCATTCAATGCAAGGTCTGACATCAGGACCTGTTCATAATCCACTA AATGAAACCTCACACACATCCGAATCAGTTAGAGATCCAGCATCAACTTTTGCACAAGTA CCTGGGCAATATGTAAGGCATCAAGCAACAGAAGAGGCCTCATCCCAAGGGGACAATATT GAGCAATACCAATACCCCCAAGTGGCACGCCAAGGGAGAATGTAA

Peptide Sequence

PEP ID	Solyc01g103160.3.1
PEP Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103YL86_CYNCS)
Sequence	MALYAILLRSLRRSSATVAAVRTQITTSVHNPQNPNFLLPHRSFAFSSAEEAAAERRRRK RRLRIEPPINALRRDPLPRGPPSPDDPRSRLPDTTSALVGPRLNLHNRVQSLIRAGDLDA AAAVARHAVFSNTRPTVFTCNAIIGAMYRSGRYNDAKALFQYFFNQYNIIPNVVSYNHVI VSHCEAGEVDEGLKVYSHIIENAPFSPSAVTYRHLTKGLIDSDRIAEAVDLLREMLNKGH GADSLVYNNLILGFLNLGNLEKANELFDELKERCTVYDGVVNATFMDWFFKQGKVKEAME SYRSLLDKKYRMVPATCNVLLEVLLRHGRETEAWALFDAMLDDHTPPTFQAVNSDTFNLM VNECFRLGKVSEALETFKKVGKGLKTRPFAMDVAGYNNMITKLSELEMMEEAEKYYMELC NKSLSPDVTTYRTMIEAYVKMDNVEGTLEKYTKMVEAGLRVIPVYAEKWFNFLIEKGKVA ECVPILTKMGEREPKPDVTTYDIVIRALCEEGNYDASSNLVIQTINYGVGLTSSLREFLL ESFGNQGRREEIERVFATKPTYSPPSTPPRGQVPWLSQLPRQLPGTSRAAGQQTSPASLS SQVQGRPSALNSTWPPSFIGGQQQASSPSFIGGRGSSQMQGQQSAPNPRWQQASPPSFVA GQGSHQLQGQQADPNPRWQQASPPTFVAGQGSHQVQGQQSAPNPRWQQASPPSFTAGQGS QQMQGQQSEPNPRWQQASPPSFVAGQGSHQMHGQHSAPNPRWQQASPPSFIAGQVPQQMQ DQPSTFARNSHQASPSFIQHGASPPSFMAGQGSQQMQGQPSAFARNVQQASPPSFVPQQD ASAHSFMGSQQMQGRPSGFTQGSQWSSAPSYMAGQGGQHQNQGQPSGFTQTPYKASPYSM DGQRTHSMQGLTSGPVHNPLNETSHTSESVRDPASTFAQVPGQYVRHQATEEASSQGDNI EQYQYPQVARQGRM*

Transcript Sequence

Transcript ID	Solyc01g103160.3.1
Transcript Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103YL86_CYNCS)
Sequence	ATGGCACTGTATGCCATACTCCTCCGCTCTCTCCGCCGTTCCTCCGCCACTGTCGCCGCC GTCAGAACTCAAATCACAACATCCGTTCACAATCCTCAAAACCCTAATTTCCTTCTACCT CATCGATCATTTGCTTTTTCATCTGCGGAAGAAGCCGCTGCTGAACGGAGGCGTCGGAAG AGGCGACTTCGTATTGAACCACCAATCAATGCCCTACGCCGTGATCCACTACCCAGGGGA CCGCCTTCTCCGGATGATCCTCGATCCCGTCTTCCTGATACCACCTCAGCGTTGGTGGGC CCTCGGCTTAACCTGCACAATCGCGTTCAATCTCTTATACGTGCTGGTGATTTGGACGCT GCAGCTGCTGTTGCTCGTCACGCCGTCTTCTCAAACACACGGCCGACTGTATTCACATGT AATGCTATCATCGGTGCTATGTATCGGTCCGGACGGTATAATGATGCTAAGGCACTGTTT CAGTACTTTTTCAATCAGTATAATATTATTCCGAACGTTGTTTCATACAATCATGTAATT GTGTCACATTGTGAAGCTGGTGAGGTTGATGAAGGCTTGAAAGTATACAGTCATATTATT GAAAATGCGCCTTTTAGTCCGTCTGCTGTGACATATCGCCATCTTACCAAGGGATTAATT GATTCTGACCGTATAGCTGAAGCTGTGGATTTGCTTAGGGAAATGCTTAATAAAGGACAT GGTGCGGATTCCTTAGTTTATAATAATTTGATATTGGGGTTCTTGAATTTGGGTAATTTA GAGAAAGCAAATGAACTGTTTGATGAGTTGAAAGAAAGGTGCACTGTTTATGATGGGGTG GTGAATGCTACTTTTATGGACTGGTTTTTCAAGCAGGGGAAGGTAAAAGAGGCTATGGAA TCATATCGATCACTTCTTGATAAGAAGTATAGGATGGTTCCTGCAACTTGTAATGTGTTG TTGGAGGTGTTGTTGAGGCATGGGAGGGAAACTGAGGCATGGGCATTGTTTGATGCAATG TTGGATGATCACACGCCACCAACATTCCAGGCTGTGAATTCCGACACTTTTAATTTAATG GTGAATGAGTGTTTTAGGCTAGGAAAGGTTTCAGAGGCATTGGAGACCTTCAAGAAGGTG GGGAAGGGCCTCAAGACCAGACCTTTTGCAATGGATGTTGCAGGTTACAATAATATGATA ACAAAACTTTCTGAGCTTGAAATGATGGAGGAAGCAGAAAAATATTATATGGAGTTGTGT AACAAGTCATTGAGCCCAGATGTCACAACTTATAGGACAATGATTGAGGCATATGTGAAG ATGGATAATGTCGAAGGCACACTGGAGAAGTACACAAAGATGGTGGAGGCAGGGCTGAGA GTCATTCCAGTCTATGCTGAGAAGTGGTTTAATTTCTTGATTGAGAAAGGCAAGGTTGCA GAGTGCGTGCCTATTCTCACCAAGATGGGTGAGAGAGAACCAAAACCTGACGTGACAACT TATGATATTGTGATTAGGGCACTCTGTGAGGAAGGTAATTATGATGCTAGTTCCAATTTA GTTATTCAAACAATAAACTATGGTGTTGGTCTCACCAGTTCCCTCAGAGAGTTCCTGTTA GAAAGTTTTGGTAACCAAGGTCGTCGTGAGGAGATTGAAAGAGTTTTTGCTACTAAACCT ACATACTCTCCACCTTCTACACCACCTCGAGGACAAGTTCCATGGCTTTCACAATTGCCT AGACAATTACCAGGAACTTCTCGTGCTGCAGGACAACAGACATCACCTGCTTCTTTATCA TCACAAGTGCAAGGTCGGCCTTCAGCTCTTAATTCAACGTGGCCTCCCTCATTCATTGGA GGACAGCAACAAGCTTCATCACCTTCTTTCATTGGAGGACGAGGATCATCACAAATGCAA GGCCAGCAGTCGGCACCTAACCCAAGGTGGCAACAAGCTTCACCACCATCTTTTGTAGCT GGACAAGGATCACATCAACTGCAAGGCCAGCAGGCAGATCCTAATCCAAGGTGGCAACAA GCTTCACCACCCACTTTTGTTGCTGGACAAGGGTCACATCAAGTTCAAGGCCAGCAGTCA GCACCTAATCCGAGGTGGCAACAAGCTTCACCACCCTCTTTTACTGCTGGGCAAGGATCA CAGCAAATGCAAGGCCAGCAGTCAGAACCTAATCCAAGGTGGCAACAAGCTTCACCACCC TCTTTTGTTGCTGGACAAGGATCACATCAAATGCACGGCCAGCACTCAGCACCTAATCCA AGGTGGCAACAAGCTTCACCACCCTCTTTTATTGCCGGACAAGTACCGCAGCAAATGCAA GATCAGCCATCAACATTTGCAAGAAATTCACATCAGGCATCACCTTCTTTTATTCAACAC GGAGCTTCACCACCGTCTTTCATGGCTGGACAAGGATCGCAGCAGATGCAAGGTCAGCCA TCAGCTTTTGCAAGAAACGTGCAACAAGCATCTCCACCTTCTTTCGTGCCCCAACAAGAT GCTTCAGCGCACTCTTTCATGGGATCACAGCAAATGCAAGGTCGCCCATCAGGTTTCACG CAGGGTTCACAATGGTCATCTGCACCCTCTTATATGGCAGGACAAGGAGGACAGCATCAA AATCAAGGTCAGCCATCAGGTTTCACACAAACTCCTTATAAGGCATCACCTTATTCCATG GATGGACAAAGAACCCATTCAATGCAAGGTCTGACATCAGGACCTGTTCATAATCCACTA AATGAAACCTCACACACATCCGAATCAGTTAGAGATCCAGCATCAACTTTTGCACAAGTA CCTGGGCAATATGTAAGGCATCAAGCAACAGAAGAGGCCTCATCCCAAGGGGACAATATT GAGCAATACCAATACCCCCAAGTGGCACGCCAAGGGAGAATGTAAATTGGGAAGCATAGT TTCTCTGAGGCAGCTGCTTTTGATACAGTTGCCTAAATAGGACTGCAGGAATAGAAACAT CTTGATGTCAGATGTCACATGCTAGAAATCATTGACAAATTTTGTAGAGACAATTGATGG TTTTAGGTGATACTTGCGATTTGAGTTGCTCATAAGTGATCGAATAGTTGTGCTTGGTGA AACAAATTAAATTGTACTATTGGTGAGAAGATATATTTATTTACTCTACATCTTGTACAC TTAAGTTTTTCCCTTCATATTAATAAAATGTATTTGCCTCGTCG