Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g102330.3.1
CDS Infomation

Carbohydrate esterase plant-like protein (AHRD V3.3 *** G7J707_MEDTR)
Sequence

ATGCTTCCTTATCTGTTATTGCTGATTTTAGCACACGCTGGTTGGGTAACGACAGCAGAT
CTAGGAAATTATTCACTAGTTAAAAACATATTCATTTTAGCAGGGCAGAGCAACATTTCC
GGTCGAGGCGGAGTGATTAATCACTCACTCCGTCCCGGAGTAGTTAATGAGTCATGGGAT
GGTGTCATCCCACGTGAGTGCGAGTCCAACCCATCAATCCTCCGACTAAGTGGAGGACTT
AAATGGGTTGAGGCTCATGAACCCCTTCATAAGGACATAGATGTGAACAACACTTGTGGG
ATTGGTCCAGGGATGCCATTTGCCAATACTGTTTTGAAAAAAGATCCAAGTATTGGAGTA
ATTGGGTTGGTTCCTTGTGCTGTTGGAGGAACGAGTATTACTGAATGGGCTCCAGGCGGC
TTCCTTTACAGGAGTATGATAAAGAGGACAAAAGCGGCCACTCGAGGCGGCGGAAAGATC
AGGGCATTGTTGTGGTTCCAAGGTGAGAGTGATACAAAGACACTTGAAGATGCCAAAATG
TATAAGGTCAGATTGGAGAGATTCTTCAACCATGTGCGCCACGATCTGGGAATGCCTAAC
TTAACTGTGATTCAGGTGGGAATTGCAACAGCACTAGGGCCATACATGGAGCTGGTGAGG
GAAGCTCAGCGTGAGATAAATATTGGGAATTTGAAATATGTGGATGCCAAAGGCCTGCAG
ATCGGACCAGATTACACGCACCTTACTACTGCTGCACAAATTCAGCTTGGACAGATGCTC
GCTGATGCCTTCCTCCGCCCCAATTAG

Peptide Sequence

PEP ID

Solyc01g102330.3.1
PEP Infomation

Carbohydrate esterase plant-like protein (AHRD V3.3 *** G7J707_MEDTR)
Sequence

MLPYLLLLILAHAGWVTTADLGNYSLVKNIFILAGQSNISGRGGVINHSLRPGVVNESWD
GVIPRECESNPSILRLSGGLKWVEAHEPLHKDIDVNNTCGIGPGMPFANTVLKKDPSIGV
IGLVPCAVGGTSITEWAPGGFLYRSMIKRTKAATRGGGKIRALLWFQGESDTKTLEDAKM
YKVRLERFFNHVRHDLGMPNLTVIQVGIATALGPYMELVREAQREINIGNLKYVDAKGLQ
IGPDYTHLTTAAQIQLGQMLADAFLRPN*

Transcript Sequence

Transcript ID

Solyc01g102330.3.1
Transcript Infomation

Carbohydrate esterase plant-like protein (AHRD V3.3 *** G7J707_MEDTR)
Sequence

AGAAAAACAATGCTTCCTTATCTGTTATTGCTGATTTTAGCACACGCTGGTTGGGTAACG
ACAGCAGATCTAGGAAATTATTCACTAGTTAAAAACATATTCATTTTAGCAGGGCAGAGC
AACATTTCCGGTCGAGGCGGAGTGATTAATCACTCACTCCGTCCCGGAGTAGTTAATGAG
TCATGGGATGGTGTCATCCCACGTGAGTGCGAGTCCAACCCATCAATCCTCCGACTAAGT
GGAGGACTTAAATGGGTTGAGGCTCATGAACCCCTTCATAAGGACATAGATGTGAACAAC
ACTTGTGGGATTGGTCCAGGGATGCCATTTGCCAATACTGTTTTGAAAAAAGATCCAAGT
ATTGGAGTAATTGGGTTGGTTCCTTGTGCTGTTGGAGGAACGAGTATTACTGAATGGGCT
CCAGGCGGCTTCCTTTACAGGAGTATGATAAAGAGGACAAAAGCGGCCACTCGAGGCGGC
GGAAAGATCAGGGCATTGTTGTGGTTCCAAGGTGAGAGTGATACAAAGACACTTGAAGAT
GCCAAAATGTATAAGGTCAGATTGGAGAGATTCTTCAACCATGTGCGCCACGATCTGGGA
ATGCCTAACTTAACTGTGATTCAGGTGGGAATTGCAACAGCACTAGGGCCATACATGGAG
CTGGTGAGGGAAGCTCAGCGTGAGATAAATATTGGGAATTTGAAATATGTGGATGCCAAA
GGCCTGCAGATCGGACCAGATTACACGCACCTTACTACTGCTGCACAAATTCAGCTTGGA
CAGATGCTCGCTGATGCCTTCCTCCGCCCCAATTAG