Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g101240.3.1
CDS Infomation

aspartic protease precursor
Sequence

ATGGATAAGAAGCATCTATGTGCTGCTCTTCTTTTATGGGCCATTGCTTGCTCTGCACTT
CCTGCTTCCTCTGGTGATTTGTTTAGAATTGGTTTGAAGAAGCACCGCTTGGATGTTGAT
AGCATAAAAGCTGCAAGAGTAGCCAAACTACAAGATAGATATGGGAAGCATGTGAATGGC
ATTGAAAAGAAATCGAGTGACTCAGATATCTATAAAGTCCCCTTAAAGAACTACTTGGAT
GCCCAATACTATGGAGAGATTGGTATTGGTTCACCTCCACAGAAATTCAAAGTTATCTTT
GATACTGGGAGTTCTAACCTCTGGGTTCCATCATCGAAATGCTATTTCTCTATTGCATGC
TGGATCCACTCTAAGTACCAGGCAAGCAAATCCAGTACATATACAAGAGATGGGGAATCT
TGTTCAATCCGTTATGGAACTGGATCTATTTCTGGCCATTTCAGTATGGACAATGTTCAA
GTTGGTGATCTTGTAGTTAAAGATCAGGTGTTTATTGAGGCGACACGAGAACCTAGTATT
ACATTTATTGTTGCAAAGTTTGATGGTATACTAGGCCTTGGTTTCCAGGAAATTTCTGTT
GGAAATACTACACCTGTCTGGTACAATATGGTGGGGCAAGGTCTTGTCAAAGAACCCGTC
TTCTCTTTCTGGTTTAACCGTGATGCAAATGCAAAAGAGGGAGGTGAACTTGTTTTTGGT
GGAGTTGATCCAAAGCACTTCAAGGGTAATCATACTTGTGTTCCGTTGACTCAGAAGGGC
TACTGGCAGTTTAATATGGGAGATTTCCTTATCGGGAACACATCAACTGGTTATTGTGCA
GGTGGTTGTGCTGCTATTGTGGATTCTGGAACATCACTGCTTGCTGGTCCAACAACCATC
GTGACACAAATCAACCATGCCATTGGAGCAGAAGGAATAGTTAGCATGGAATGTAAAACT
ATTGTTTCACAGTATGGAGAGATGATCTGGGACTTACTAGTATCAGGGATAAGACCTGAT
CAAGTTTGTTCACAAGCAGGTTTATGCTTTCTTGATGGATCTCAGCATGTGAGCTCTAAT
ATCAGAACTGTAGTTGAAAGGGAAACTGAAGGAAGTTCTGTTGGTGAAGCACCACTGTGC
ACTGCCTGTGAGATGGCAGTTGTTTGGATGCAAAACCAGCTCAAACAAGAGCAGACAAAA
GAGAAAGTGTTAGAGTATGTGAATCAGCTTTGTGAGAAAATACCAAGTCCAATGGGAGAA
TCTGCGATTGACTGTAACCGCATCTCATCCATGCCAGATATTACATTCACTATCAAAGAT
ACAGCCTTTGTGCTCACTCCAGAACAGTATATTCTTAAAACTGGAGAAGGGGTTGCTACA
ATTTGTGTCAGTGGATTTGCTGCTCTGGATGTGCCACCACCTCGCGGTCCTCTTTGGATT
CTTGGAGATGTATTCATGGGGCCGTATCACACTGTCTTTGACTATGGTAAATCCCAAGAA
GCAGGCAGTAGAAGCCACCAGGAAGGCGAAAATCCTCAGCGAGATCCTCTAGAACAGAAG
CCTCATCAGCCTATGTTTCAAAAAGTTGAGACGCAACTTTGT

Peptide Sequence

PEP ID

Solyc01g101240.3.1
PEP Infomation

aspartic protease precursor
Sequence

MDKKHLCAALLLWAIACSALPASSGDLFRIGLKKHRLDVDSIKAARVAKLQDRYGKHVNG
IEKKSSDSDIYKVPLKNYLDAQYYGEIGIGSPPQKFKVIFDTGSSNLWVPSSKCYFSIAC
WIHSKYQASKSSTYTRDGESCSIRYGTGSISGHFSMDNVQVGDLVVKDQVFIEATREPSI
TFIVAKFDGILGLGFQEISVGNTTPVWYNMVGQGLVKEPVFSFWFNRDANAKEGGELVFG
GVDPKHFKGNHTCVPLTQKGYWQFNMGDFLIGNTSTGYCAGGCAAIVDSGTSLLAGPTTI
VTQINHAIGAEGIVSMECKTIVSQYGEMIWDLLVSGIRPDQVCSQAGLCFLDGSQHVSSN
IRTVVERETEGSSVGEAPLCTACEMAVVWMQNQLKQEQTKEKVLEYVNQLCEKIPSPMGE
SAIDCNRISSMPDITFTIKDTAFVLTPEQYILKTGEGVATICVSGFAALDVPPPRGPLWI
LGDVFMGPYHTVFDYGKSQEAGSRSHQEGENPQRDPLEQKPHQPMFQKVETQLC

Transcript Sequence

Transcript ID

Solyc01g101240.3.1
Transcript Infomation

aspartic protease precursor
Sequence

TCTCCTTTTATTATTTTCCCTTGGTTCAAAGCACATTTCTTTTATACAATATAAATAAAT
TGATTCACGTGTCAAACAATATGTGGTGTATTTACTTTAAACTGTCCTATTGGCTATTTA
ATAGTATCTGTTTACACTCGCTTCCTTACTTCTTGTTGTTTCTCTGCTTTCTATCCAAAA
ACTTCTCCAGGTTACCTTTTTATAAACACTTTATCACGTTTGACTCTTTAAAACTTTACC
TTCTTGTTTCTAGTTTTCATTTAGATGATGATTAGATGATGATTTTTCAGTCGGATCTTG
ATCTTTTATTGTAGTGAATTTCTTATAATTATCATGTTTTGCTTCTACTAATTAGTTCAG
ACGGATTAATCATCTGTATATTGTTTAGCAGTTTAACTTCTTGAAAACCCTTTTTCTTGT
TTTGCTTTTTTTGAGAGTCTAGTTGTTTGACTTGCTTTTCTTGTATCCATGTTGTCAATT
TCTTCTTCTTTTTATGTTACCTTTCTAAAAAAAAAATCTTCTTTTTTTCCCATGTTCTTG
GGCTACAAGATTGCTTTTTCTTGATTTGAAAGGAATATTTTTTTACAATTTTCAAGAAAA
AAGAAAGATGGGTCTTTGATATTTTCTTAATCTTGGTTTAAGGTTGATGCACAATAAAAA
TCTGAATTTCCGGGTAAAGAGTCATTCTTCTATTGTGATAGTAAGCAATTAATATGATGT
TTGTAGCGTGTGAATGTTCTACTTTTTAACTAATCTTGGAGCTAGCAAATTTCATATGTT
AAGTTCTTGGTTAGTGATATTAAGTTTTCATGGGAAGTGGATAGGGAATAGTTTCAGGAC
CCTTGCGAGTTGTGAGTATTCATTCTGTAATACTGTTACATGTGCACATAATTATTGTGG
GTTAAGTTAATATTTCTCTTTTGTTAAGACTAGATTATGACATTGTAGAAATCAAAATAT
TCCTGTTTAGTTGTGTTAACATCTTGTTAGTCCCCGTCACTCTGCAGACATGGATAAGAA
GCATCTATGTGCTGCTCTTCTTTTATGGGCCATTGCTTGCTCTGCACTTCCTGCTTCCTC
TGGTGATTTGTTTAGAATTGGTTTGAAGAAGCACCGCTTGGATGTTGATAGCATAAAAGC
TGCAAGAGTAGCCAAACTACAAGATAGATATGGGAAGCATGTGAATGGCATTGAAAAGAA
ATCGAGTGACTCAGATATCTATAAAGTCCCCTTAAAGAACTACTTGGATGCCCAATACTA
TGGAGAGATTGGTATTGGTTCACCTCCACAGAAATTCAAAGTTATCTTTGATACTGGGAG
TTCTAACCTCTGGGTTCCATCATCGAAATGCTATTTCTCTATTGCATGCTGGATCCACTC
TAAGTACCAGGCAAGCAAATCCAGTACATATACAAGAGATGGGGAATCTTGTTCAATCCG
TTATGGAACTGGATCTATTTCTGGCCATTTCAGTATGGACAATGTTCAAGTTGGTGATCT
TGTAGTTAAAGATCAGGTGTTTATTGAGGCGACACGAGAACCTAGTATTACATTTATTGT
TGCAAAGTTTGATGGTATACTAGGCCTTGGTTTCCAGGAAATTTCTGTTGGAAATACTAC
ACCTGTCTGGTACAATATGGTGGGGCAAGGTCTTGTCAAAGAACCCGTCTTCTCTTTCTG
GTTTAACCGTGATGCAAATGCAAAAGAGGGAGGTGAACTTGTTTTTGGTGGAGTTGATCC
AAAGCACTTCAAGGGTAATCATACTTGTGTTCCGTTGACTCAGAAGGGCTACTGGCAGTT
TAATATGGGAGATTTCCTTATCGGGAACACATCAACTGGTTATTGTGCAGGTGGTTGTGC
TGCTATTGTGGATTCTGGAACATCACTGCTTGCTGGTCCAACAACCATCGTGACACAAAT
CAACCATGCCATTGGAGCAGAAGGAATAGTTAGCATGGAATGTAAAACTATTGTTTCACA
GTATGGAGAGATGATCTGGGACTTACTAGTATCAGGGATAAGACCTGATCAAGTTTGTTC
ACAAGCAGGTTTATGCTTTCTTGATGGATCTCAGCATGTGAGCTCTAATATCAGAACTGT
AGTTGAAAGGGAAACTGAAGGAAGTTCTGTTGGTGAAGCACCACTGTGCACTGCCTGTGA
GATGGCAGTTGTTTGGATGCAAAACCAGCTCAAACAAGAGCAGACAAAAGAGAAAGTGTT
AGAGTATGTGAATCAGCTTTGTGAGAAAATACCAAGTCCAATGGGAGAATCTGCGATTGA
CTGTAACCGCATCTCATCCATGCCAGATATTACATTCACTATCAAAGATACAGCCTTTGT
GCTCACTCCAGAACAGTATATTCTTAAAACTGGAGAAGGGGTTGCTACAATTTGTGTCAG
TGGATTTGCTGCTCTGGATGTGCCACCACCTCGCGGTCCTCTTTGGATTCTTGGAGATGT
ATTCATGGGGCCGTATCACACTGTCTTTGACTATGGTAAATCCCAAGAAGCAGGCAGTAG
AAGCCACCAGGAAGGCGAAAATCCTCAGCGAGATCCTCTAGAACAGAAGCCTCATCAGCC
TATGTTTCAAAAAGTTGAGACGCAACTTTGT