Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g101210.4.1
CDS Infomation

viridiflorene synthase
Sequence

ATGGCCTCAGCTGCTGCATTGGTGAGCAACTACAGAGAGGAGGAGATTGTTCGCCCTGTT
GCTGACTTCTCTCCAAGTCTTTGGGGTGATCGTTTCCATTCATTCTCCCTTGACAATAAG
ATTGCTGGAAAATATGCTCAAGAAATTGAAACTTTGAAGGAACAATCAAGAGTAATATTA
TCTGCATCTTCTGGAACAACATTGGCTCAGAAATTGGATCTGATAGACATTGTTGAGCGA
CTTGGCTTAGCTTATCATTTTGAGAAACAAATAGACGATGTGTTGGATCAAATTTACAAA
GCAGATCCTAACTCTGAGGCTCAGGAATACAATGATTTACAAACTTCATCCATCCAATTT
CGACTATTGAGACAACATGGTTACAATATCTCGCCGAAACTTTTTAGCAGATTCCAAGAT
GCAAAAGGCAAATTTAACGAATCTCTTAGCAACGACATCAAGGGTCTTTTGAACTTATAT
GAAGCCTCACATGTAAGGACTCATGGAGAAGATATTTTGGAAGAGGCACTTGCTTTCTCT
ACTGCTCATCTTGAATCTGCAGCTCCACATTTGAAGTCACCTCTGAGTAAGCAAGTGACT
CATGCCCTTGAGCAATCTCTCCATAAGAGCATTCCAAGAGTTGAGACACGATACTTCATC
TCTATCTACGAAGAGGAGGAACAGAAGAATGATTTGTTGCTTCGATTTGCAAAACTGGAC
TTCAACTTACTTCAGATGTTGCACAAACAAGAACTCAGTGAAGTATCAAGGTGGTGGAAA
GATTTGGATTTTGTGACAACCCTTCCATATGCTAGGGATAGAGCAGTCGAATGTTACTTC
TGGACGATGGGAGTGTATGCTGAACCACAATACTCTCAGGCTCGTGTCATGCTTGCTAAG
ACTATAGCAATGATTTCGATAGTAGATGACACATTCGATGCTTATGGCATTGTAAAAGAA
CTGGAGGTCTACACCGATGCCATACAGAGGTGGGATATTAGCCATATTGATCGGCTCCCT
GATTACATGAAAATCAGTTACAAAGCACTTTTAGATCTCTACGATGATTATGAAACAGAA
CTGTCAAAGGATGGCAGATCCGATGTTGTACACTACGCTAAAGAAAGAATGAAAGAAATT
GTGAGAAACTATTTTGTGGAAGCAAAATGGTTCATTGAAGGATACATGCCACCAGTTTCT
GAGTATCTTTGCAATGCATTAGCTACCAGCACTTATTACTTGCTTACCACTACATCCTAC
TTGGGCGTGAAATCTGCTAACAAGGAAGATTTTGAATGGTTGGCAAAGAACCCTAAAATT
CTTGAAGCCAATGTGACACTATGCCGAGTCATTGATGACATAGCCACCTATGATGTTGAG
AAGGGTAGAGGTCAGATTGCAACTGGAATTGAATGTTACATGAGAGATTATGGCGTATCC
ACAGAAGAGGCAATGGAAAAATTTGAAGAGATGGCTGAGATAGCATGGAAGGATGTAAAT
GAAGGAATCCTTCGACCAACTCCTGTCTCTACGGAGATTCTCACTCGCATTCTCAATCTT
GCTCGCATTATTGATGTCACTTATAAACACAATCAAGATGGATACACGCATCCTGAAAAA
GTACTAAAACCTCATATTATTGCGTTGTTGGTGGACTCTATTGAAATTTAA

Peptide Sequence

PEP ID

Solyc01g101210.4.1
PEP Infomation

viridiflorene synthase
Sequence

MASAAALVSNYREEEIVRPVADFSPSLWGDRFHSFSLDNKIAGKYAQEIETLKEQSRVIL
SASSGTTLAQKLDLIDIVERLGLAYHFEKQIDDVLDQIYKADPNSEAQEYNDLQTSSIQF
RLLRQHGYNISPKLFSRFQDAKGKFNESLSNDIKGLLNLYEASHVRTHGEDILEEALAFS
TAHLESAAPHLKSPLSKQVTHALEQSLHKSIPRVETRYFISIYEEEEQKNDLLLRFAKLD
FNLLQMLHKQELSEVSRWWKDLDFVTTLPYARDRAVECYFWTMGVYAEPQYSQARVMLAK
TIAMISIVDDTFDAYGIVKELEVYTDAIQRWDISHIDRLPDYMKISYKALLDLYDDYETE
LSKDGRSDVVHYAKERMKEIVRNYFVEAKWFIEGYMPPVSEYLCNALATSTYYLLTTTSY
LGVKSANKEDFEWLAKNPKILEANVTLCRVIDDIATYDVEKGRGQIATGIECYMRDYGVS
TEEAMEKFEEMAEIAWKDVNEGILRPTPVSTEILTRILNLARIIDVTYKHNQDGYTHPEK
VLKPHIIALLVDSIEI*

Transcript Sequence

Transcript ID

Solyc01g101210.4.1
Transcript Infomation

viridiflorene synthase
Sequence

ATCATCATTTGTTCAATTCTCTACTACAGTCTACAAACATATAACATAACGAAGGAAATT
TTTTCAGAAACAAAGAGTATAGTATAAATGGCCTCAGCTGCTGCATTGGTGAGCAACTAC
AGAGAGGAGGAGATTGTTCGCCCTGTTGCTGACTTCTCTCCAAGTCTTTGGGGTGATCGT
TTCCATTCATTCTCCCTTGACAATAAGATTGCTGGAAAATATGCTCAAGAAATTGAAACT
TTGAAGGAACAATCAAGAGTAATATTATCTGCATCTTCTGGAACAACATTGGCTCAGAAA
TTGGATCTGATAGACATTGTTGAGCGACTTGGCTTAGCTTATCATTTTGAGAAACAAATA
GACGATGTGTTGGATCAAATTTACAAAGCAGATCCTAACTCTGAGGCTCAGGAATACAAT
GATTTACAAACTTCATCCATCCAATTTCGACTATTGAGACAACATGGTTACAATATCTCG
CCGAAACTTTTTAGCAGATTCCAAGATGCAAAAGGCAAATTTAACGAATCTCTTAGCAAC
GACATCAAGGGTCTTTTGAACTTATATGAAGCCTCACATGTAAGGACTCATGGAGAAGAT
ATTTTGGAAGAGGCACTTGCTTTCTCTACTGCTCATCTTGAATCTGCAGCTCCACATTTG
AAGTCACCTCTGAGTAAGCAAGTGACTCATGCCCTTGAGCAATCTCTCCATAAGAGCATT
CCAAGAGTTGAGACACGATACTTCATCTCTATCTACGAAGAGGAGGAACAGAAGAATGAT
TTGTTGCTTCGATTTGCAAAACTGGACTTCAACTTACTTCAGATGTTGCACAAACAAGAA
CTCAGTGAAGTATCAAGGTGGTGGAAAGATTTGGATTTTGTGACAACCCTTCCATATGCT
AGGGATAGAGCAGTCGAATGTTACTTCTGGACGATGGGAGTGTATGCTGAACCACAATAC
TCTCAGGCTCGTGTCATGCTTGCTAAGACTATAGCAATGATTTCGATAGTAGATGACACA
TTCGATGCTTATGGCATTGTAAAAGAACTGGAGGTCTACACCGATGCCATACAGAGGTGG
GATATTAGCCATATTGATCGGCTCCCTGATTACATGAAAATCAGTTACAAAGCACTTTTA
GATCTCTACGATGATTATGAAACAGAACTGTCAAAGGATGGCAGATCCGATGTTGTACAC
TACGCTAAAGAAAGAATGAAAGAAATTGTGAGAAACTATTTTGTGGAAGCAAAATGGTTC
ATTGAAGGATACATGCCACCAGTTTCTGAGTATCTTTGCAATGCATTAGCTACCAGCACT
TATTACTTGCTTACCACTACATCCTACTTGGGCGTGAAATCTGCTAACAAGGAAGATTTT
GAATGGTTGGCAAAGAACCCTAAAATTCTTGAAGCCAATGTGACACTATGCCGAGTCATT
GATGACATAGCCACCTATGATGTTGAGAAGGGTAGAGGTCAGATTGCAACTGGAATTGAA
TGTTACATGAGAGATTATGGCGTATCCACAGAAGAGGCAATGGAAAAATTTGAAGAGATG
GCTGAGATAGCATGGAAGGATGTAAATGAAGGAATCCTTCGACCAACTCCTGTCTCTACG
GAGATTCTCACTCGCATTCTCAATCTTGCTCGCATTATTGATGTCACTTATAAACACAAT
CAAGATGGATACACGCATCCTGAAAAAGTACTAAAACCTCATATTATTGCGTTGTTGGTG
GACTCTATTGAAATTTAA