Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g101020.3.1
CDS Infomation	FACT complex subunit SPT16, putative (AHRD V3.3 *** B9RFP6_RICCO)
Sequence	ATGAAGGACATATGTGAAGCAAGTGATTTCCCTTTCCTGGCCGGTAAATCCACAAACTGG TTGTGCTCAGTTTCTTCTTGTATTTTTGGTCTTCTTCACATTCTTTGGTGGAATACCATC AATGTAGGAATTGGCATAACTTCCTGTTGTTTTTTCACAGGTTATCATCACTCGTCCTAC TCGATGGCTGATACCCGGAATAGTAATGTCAAGGCTTCTAATGACAAAGCATCCGGAACA GCCAATCCTTATGCCATCAATCTGGAGAACTTCGGTAAAAGACTAAAAACATTATACTCC CACTGGACTGAACACAATGATGAACTTTGGGGAGCTTCTGAAGCTCTTGCCATAGGAACT CCTCCTCCATCTGAGGATTTGCGGTATCTGAAGTCGTCAGCTTTAAATATGTGGTTAGTT GGGTATGAATTTCCTGATACTATCATGGTTTTCATGAAGAAGCAGATCCATTTTCTCTGT AGCCAGAAGAAGGCCTCCTTACTTGAAGCTGTCAAGAAAACCTCCAAGGATGTTGTGGGA GTGGATGTTGTAATGCACGTGAGGTCTAAAAAAGATGACGGGACTGGTGCAATGGATGCA ATTTTTCGAGCAATGCAAGATCAGTCAGAGTCAAATGTGCCCGTTGTTGGACACATCGCG AGAGAAGCTCCTGAAGGGAATCTTTTAGAGACATGGACTGAGAAGCTAAAGAATACACAA TTTCAGCTCAGTGATGTAACTAATGGATTCTCTGACCTGTTTGCTGTCAAGGATACCGCT GAAATTATGAATGTGAAGAAAGCTGGCTATCTGACTTCATCAGTGATGAAGCACTTTGTA GTCCCAAAGCTAGAAAGGGTTATCGATGAGGAGAAGAAGGTGTCACATTCTTCACTAATG GATGATACTGAAAAGGTCATACTGGAACCTGCAAAGATTAAGGTGAAGTTGAAGGCAGAG AATGTCGACATCTGTTACCCTCCAATTTTTCAGAGTGGAGGAGAGTTTGATCTGAGACCA AGTGCATCAAGCAATGATCAGAATCTTTACTATGATTCAACAAGTGTGATTATCTGTGCA ATTGGTTCTCGATATAATAGTTACTGCTCAAATGTTGCTCGGACCTTTCTAATTGATGCC AATCCAATGCAAAGCAAGGCGTATGAAGTCCTTTTGAAGGCTCATGAGGCTGCAATTGGA GCTCTGAGACCAGGAAATAAGGCTGGAGATGTCTACCAAGCAGCCCTCAATGTGGTTGAA AAGGAGGCACCTGAATTGGTTGCAAATTTGACGAGATCTGCAGGAACTGGAATTGGGCTT GAGTTCCGTGAATCAGGGTTAAACCTCAACGGCAAGAATGATAGAATGCTGAAATCTGGC ATGGTTTTTAATGTGTCTCTTGGGTTTCAGAATTTGCAAACAGAGTCTAAAAACCCCAAA ACTGAAAAAATTTGTGTTTTGGTTGCTGATACAGTTGTTATTGGTCAAAATGCTCCAGAA GTGGTGACTTCTATGAGTTCTAAAGCCGTAAAAGATGTGGCTTACTCATTCAACGAGGAT GAAGAAGAAGAGGAGGAGCAGCCGAAGGTCAAAGCTAAGCCTGTTGCTGCCAATGGACTC TCATCCAAGGCTACACTTAGATCAGTTAACCACGAGACATCAAGGGAGGAACTAAGACGG CAACACCAGGCAGAATTGGCCCGCCAAAAGAACGAAGAAACTGCACGAAGGCTCACAGGA GGAAGTTCTGGGGGTGCAGATAGCCGTGGTTCTGCGAAAGCCACTGGAGATTTGCTTGCA TATAAGAACATTAATGATCTGCCACCTCCAAGAGAATTGATGATTCAGGTTGACCAGCGG AGTGAGGCTATTCTTTTACCTATTCATGGTACCATGATTCCATTCCATATTGCCACCGTG AAAAGTGTATCTAGTCAACAAGATACTAACCGTACCTGCTATATCCGAATAATGTTCAAT GTTCCTGGCACTCCATTCACTCCTCATGACACAAATACTCTAAAGTTCCAGGGATCAATA TATGTTAAAGAAGTTTCATTTCGTTCCAAGGACCCAAGGCACATCACTGAAGTGGTTCAA CAAATAAGAACCCTCCGCAGGCAGGTTGTCTCTAGAGAATCAGAGAGAGCTGAGAGAGCA ACTTTAGTAACACAAGAGAAACTTCAAGTTGCTGGAGCCAAATTTAAACCAATCAAGTTG TCAGATCTGTGGATTCGTCCAGTATTTGGTGGTCGCGGGAGAAAGCTTCCTGGTACTCTA GAGGCTCACACAAATGGATTCCGGTATGGAACTTCAAGGCCAGATGAGAGAGTGGATGTT ATGTATGGTAACATCAAACACGCATTCTTCCAGCCAGCAGAAAAGGAGATGATTACAGTC CTCCACTTTCACCTGCACAATCACATAATGGTGGGGAACAAGAAAACCAAGGACGTGCAG TTCTATGTTGAAGTGATGGACGTTGTGCAGACAATTGGGGGTGGAAAAAGATCTGCTTAT GATCCTGATGAGATTGAGGAGGAACAGCGTGAAAGGGATAGGAAAAACAAGATTAACATG GAATTTCAAACATTTGTGAATAAGGTAAATGACCTCTGGACCCAGCCTCAGTTTAAAGGG CTTGATTTGGAGTTTGATCAGCCGTTGAGAGAACTTGGATTCCACGGGGTACCCCACAAG TCAACAGCTTTTATAGTCCCAACATCTAGCTGCCTTGTTGAGCTCGTAGAGACACCATTT GTTGTGATCACTCTCTGTGAGATTGAGATAGTCAACTTGGAGAGGGTTGGTCTCGGGCAG AAGAATTTTGACATGACAATTATATTCAAGGACTTCAAAAGAGATGTTATGCGAATTGAT TCTATCCCTTCAACTTCTCTTGATGGCATCAAGGAGTGGCTCGATACAACTGACCTTAAG TACTATGAGAGCAGGCTGAATCTGAACTGGCGTCAGATACTGAAAACAATTACTGATGAT CCGGAAGAGTTCATAGAGAATGGTGGATGGGAATTTTTGAATTTAGAAGGTACTGATTCG GAATCTGAGAACTCACAGGAGTCTGATCAAGGATATGAACCTTCAGATGTAGAGCCCGTC TCATCAGACGAGGAAGATGATGAAAGCGCATCACTAGTTGAGTCAGATGATGATGAAGGG GAGGACTCTGAGGAATATTCAGAAGAAGAAGGGAAAACATGGGAAGAGCTGGAAAGAGAA GCAAGCAATGCCGACAGAGAGAAAGGGGCTGAATCAGACAGTGACAATGATAGGAAGAGG AGGAATATGAAGCCTTTTGGGAAAGGTCGTCCTCCAGAGAGAAGAAATCTCTCTAGCAAC ATTTCCAAGAGACCCAGGTTTAGTAGTATATGCTGCATAAACTTGGATCTTAGAATAGTT TTTCTCTTTTTTCTGTGTTTGCCAAGTAGTGAATTCGTTTTTGACCTTGGTACTTTTGTT TTTCAAAATTTACTCAGTTACTTGTCAGCTACATTTCTAGGACAATTGCTCGCCTATTAC AGTGCAAAAGGTCTTGTTCCTATAATACCTGGGAATGTAGGTGCACCACCAGGTTGTTAC TCGAGTGACACCCCACTGAGAAATGATCTGAGAGGTCTTTCTACCTGA

Peptide Sequence

PEP ID	Solyc01g101020.3.1
PEP Infomation	FACT complex subunit SPT16, putative (AHRD V3.3 *** B9RFP6_RICCO)
Sequence	MKDICEASDFPFLAGKSTNWLCSVSSCIFGLLHILWWNTINVGIGITSCCFFTGYHHSSY SMADTRNSNVKASNDKASGTANPYAINLENFGKRLKTLYSHWTEHNDELWGASEALAIGT PPPSEDLRYLKSSALNMWLVGYEFPDTIMVFMKKQIHFLCSQKKASLLEAVKKTSKDVVG VDVVMHVRSKKDDGTGAMDAIFRAMQDQSESNVPVVGHIAREAPEGNLLETWTEKLKNTQ FQLSDVTNGFSDLFAVKDTAEIMNVKKAGYLTSSVMKHFVVPKLERVIDEEKKVSHSSLM DDTEKVILEPAKIKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQNLYYDSTSVIICA IGSRYNSYCSNVARTFLIDANPMQSKAYEVLLKAHEAAIGALRPGNKAGDVYQAALNVVE KEAPELVANLTRSAGTGIGLEFRESGLNLNGKNDRMLKSGMVFNVSLGFQNLQTESKNPK TEKICVLVADTVVIGQNAPEVVTSMSSKAVKDVAYSFNEDEEEEEEQPKVKAKPVAANGL SSKATLRSVNHETSREELRRQHQAELARQKNEETARRLTGGSSGGADSRGSAKATGDLLA YKNINDLPPPRELMIQVDQRSEAILLPIHGTMIPFHIATVKSVSSQQDTNRTCYIRIMFN VPGTPFTPHDTNTLKFQGSIYVKEVSFRSKDPRHITEVVQQIRTLRRQVVSRESERAERA TLVTQEKLQVAGAKFKPIKLSDLWIRPVFGGRGRKLPGTLEAHTNGFRYGTSRPDERVDV MYGNIKHAFFQPAEKEMITVLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTIGGGKRSAY DPDEIEEEQRERDRKNKINMEFQTFVNKVNDLWTQPQFKGLDLEFDQPLRELGFHGVPHK STAFIVPTSSCLVELVETPFVVITLCEIEIVNLERVGLGQKNFDMTIIFKDFKRDVMRID SIPSTSLDGIKEWLDTTDLKYYESRLNLNWRQILKTITDDPEEFIENGGWEFLNLEGTDS ESENSQESDQGYEPSDVEPVSSDEEDDESASLVESDDDEGEDSEEYSEEEGKTWEELERE ASNADREKGAESDSDNDRKRRNMKPFGKGRPPERRNLSSNISKRPRFSSICCINLDLRIV FLFFLCLPSSEFVFDLGTFVFQNLLSYLSATFLGQLLAYYSAKGLVPIIPGNVGAPPGCY SSDTPLRNDLRGLST*

Transcript Sequence

Transcript ID	Solyc01g101020.3.1
Transcript Infomation	FACT complex subunit SPT16, putative (AHRD V3.3 *** B9RFP6_RICCO)
Sequence	ATATTAAATTTCCTGACATTACTAATACCATAAATTTTCATGTATTGTAATGCACCCTTC AATAGAGAGGATACCAAACTATGTACTATAGTATACAAAATTCATGTTTTAGTAAATACA CAGTAAGTTCAACATTAACATTATTTCTTCACCCCAAAGGCTAACAATGTCATCAATTTT TTTAGAGATTTTTTTTATATATCCCTTAATTTTATCATTTGGCGATGATATATTTTCGTA ACAAAAATGATTTACTTATATCACTTTTAAAATGAATAATTAAATAAGAACAGAAATAGT AATAATTATAATAACGCACATTAATTGAAACGTACTGATATATGTATTTAATTAAACATA GAATTAATTATTGAATGACAATGCGACAATAAGGAGGAGTACTCAATATTTTGCAAGATA CTTTTTAAAACTGGGAAACAAATTTCAGTGCAAAAAAAATAATAATTTAAAAATCTAAAT TCTTCAACAAGTGTTGAACTATCAACTCTACCGTACAGTCTTCTTTAATTTTAGGTGAGA AAATACAAGTTTAGAACTTAAAGATATCAACTGACTCACTTAAGGTAATTAATTTACTTC ATAATAAAAAACATTCTCACGTATATTATAATGAACGCATAAAATTAATTGCTTTGATAA AACCTTAATTTAATATAAAATTTGAAAGAAAAACAACATGATAGACTTGCTAGTCAGAAA TAATCGAACACTGAATTAGGTTCTGCTTTACTCTGTTTATTTGAAAAATATTGAAACCAT ATAAAAAATAAATAATACTCCAAACTCCTCCTTTTTTTTAAAAAAAAATAACAAATAAAT ATATGTATCAATTTTTTTTTTATAGTTATACTGGAGATATGTACACAGGTGTGTATTACG GATCCTTGGGCGTAATATCTTCCAACTCGAAGGATAAGCGAAGTCATTATGCAGGGTATA TAAGCGCAACGAACCCTGAAGCCCCATCTTCAAACACTCTCTGACATATATCTTCTTCTT TAAATTCCTCCATTGATAAAAATGATCGTCTTCGTCGATCCTGTTTAATATAAGAGATCG TAATTGCATCAGATCTGTATCGGCGTCACAAAGCTCGGTTCATGATCAGGATATTAGAGG ATCGGAGAAAGGTTTGTTCCTGAAAAGCAGAGTCAATTGCAAACTTGAGATTCGGATGAT TACTGTATATGAAGGACATATGTGAAGCAAGTGATTTCCCTTTCCTGGCCGGTAAATCCA CAAACTGGTTGTGCTCAGTTTCTTCTTGTATTTTTGGTCTTCTTCACATTCTTTGGTGGA ATACCATCAATGTAGGAATTGGCATAACTTCCTGTTGTTTTTTCACAGGTTATCATCACT CGTCCTACTCGATGGCTGATACCCGGAATAGTAATGTCAAGGCTTCTAATGACAAAGCAT CCGGAACAGCCAATCCTTATGCCATCAATCTGGAGAACTTCGGTAAAAGACTAAAAACAT TATACTCCCACTGGACTGAACACAATGATGAACTTTGGGGAGCTTCTGAAGCTCTTGCCA TAGGAACTCCTCCTCCATCTGAGGATTTGCGGTATCTGAAGTCGTCAGCTTTAAATATGT GGTTAGTTGGGTATGAATTTCCTGATACTATCATGGTTTTCATGAAGAAGCAGATCCATT TTCTCTGTAGCCAGAAGAAGGCCTCCTTACTTGAAGCTGTCAAGAAAACCTCCAAGGATG TTGTGGGAGTGGATGTTGTAATGCACGTGAGGTCTAAAAAAGATGACGGGACTGGTGCAA TGGATGCAATTTTTCGAGCAATGCAAGATCAGTCAGAGTCAAATGTGCCCGTTGTTGGAC ACATCGCGAGAGAAGCTCCTGAAGGGAATCTTTTAGAGACATGGACTGAGAAGCTAAAGA ATACACAATTTCAGCTCAGTGATGTAACTAATGGATTCTCTGACCTGTTTGCTGTCAAGG ATACCGCTGAAATTATGAATGTGAAGAAAGCTGGCTATCTGACTTCATCAGTGATGAAGC ACTTTGTAGTCCCAAAGCTAGAAAGGGTTATCGATGAGGAGAAGAAGGTGTCACATTCTT CACTAATGGATGATACTGAAAAGGTCATACTGGAACCTGCAAAGATTAAGGTGAAGTTGA AGGCAGAGAATGTCGACATCTGTTACCCTCCAATTTTTCAGAGTGGAGGAGAGTTTGATC TGAGACCAAGTGCATCAAGCAATGATCAGAATCTTTACTATGATTCAACAAGTGTGATTA TCTGTGCAATTGGTTCTCGATATAATAGTTACTGCTCAAATGTTGCTCGGACCTTTCTAA TTGATGCCAATCCAATGCAAAGCAAGGCGTATGAAGTCCTTTTGAAGGCTCATGAGGCTG CAATTGGAGCTCTGAGACCAGGAAATAAGGCTGGAGATGTCTACCAAGCAGCCCTCAATG TGGTTGAAAAGGAGGCACCTGAATTGGTTGCAAATTTGACGAGATCTGCAGGAACTGGAA TTGGGCTTGAGTTCCGTGAATCAGGGTTAAACCTCAACGGCAAGAATGATAGAATGCTGA AATCTGGCATGGTTTTTAATGTGTCTCTTGGGTTTCAGAATTTGCAAACAGAGTCTAAAA ACCCCAAAACTGAAAAAATTTGTGTTTTGGTTGCTGATACAGTTGTTATTGGTCAAAATG CTCCAGAAGTGGTGACTTCTATGAGTTCTAAAGCCGTAAAAGATGTGGCTTACTCATTCA ACGAGGATGAAGAAGAAGAGGAGGAGCAGCCGAAGGTCAAAGCTAAGCCTGTTGCTGCCA ATGGACTCTCATCCAAGGCTACACTTAGATCAGTTAACCACGAGACATCAAGGGAGGAAC TAAGACGGCAACACCAGGCAGAATTGGCCCGCCAAAAGAACGAAGAAACTGCACGAAGGC TCACAGGAGGAAGTTCTGGGGGTGCAGATAGCCGTGGTTCTGCGAAAGCCACTGGAGATT TGCTTGCATATAAGAACATTAATGATCTGCCACCTCCAAGAGAATTGATGATTCAGGTTG ACCAGCGGAGTGAGGCTATTCTTTTACCTATTCATGGTACCATGATTCCATTCCATATTG CCACCGTGAAAAGTGTATCTAGTCAACAAGATACTAACCGTACCTGCTATATCCGAATAA TGTTCAATGTTCCTGGCACTCCATTCACTCCTCATGACACAAATACTCTAAAGTTCCAGG GATCAATATATGTTAAAGAAGTTTCATTTCGTTCCAAGGACCCAAGGCACATCACTGAAG TGGTTCAACAAATAAGAACCCTCCGCAGGCAGGTTGTCTCTAGAGAATCAGAGAGAGCTG AGAGAGCAACTTTAGTAACACAAGAGAAACTTCAAGTTGCTGGAGCCAAATTTAAACCAA TCAAGTTGTCAGATCTGTGGATTCGTCCAGTATTTGGTGGTCGCGGGAGAAAGCTTCCTG GTACTCTAGAGGCTCACACAAATGGATTCCGGTATGGAACTTCAAGGCCAGATGAGAGAG TGGATGTTATGTATGGTAACATCAAACACGCATTCTTCCAGCCAGCAGAAAAGGAGATGA TTACAGTCCTCCACTTTCACCTGCACAATCACATAATGGTGGGGAACAAGAAAACCAAGG ACGTGCAGTTCTATGTTGAAGTGATGGACGTTGTGCAGACAATTGGGGGTGGAAAAAGAT CTGCTTATGATCCTGATGAGATTGAGGAGGAACAGCGTGAAAGGGATAGGAAAAACAAGA TTAACATGGAATTTCAAACATTTGTGAATAAGGTAAATGACCTCTGGACCCAGCCTCAGT TTAAAGGGCTTGATTTGGAGTTTGATCAGCCGTTGAGAGAACTTGGATTCCACGGGGTAC CCCACAAGTCAACAGCTTTTATAGTCCCAACATCTAGCTGCCTTGTTGAGCTCGTAGAGA CACCATTTGTTGTGATCACTCTCTGTGAGATTGAGATAGTCAACTTGGAGAGGGTTGGTC TCGGGCAGAAGAATTTTGACATGACAATTATATTCAAGGACTTCAAAAGAGATGTTATGC GAATTGATTCTATCCCTTCAACTTCTCTTGATGGCATCAAGGAGTGGCTCGATACAACTG ACCTTAAGTACTATGAGAGCAGGCTGAATCTGAACTGGCGTCAGATACTGAAAACAATTA CTGATGATCCGGAAGAGTTCATAGAGAATGGTGGATGGGAATTTTTGAATTTAGAAGGTA CTGATTCGGAATCTGAGAACTCACAGGAGTCTGATCAAGGATATGAACCTTCAGATGTAG AGCCCGTCTCATCAGACGAGGAAGATGATGAAAGCGCATCACTAGTTGAGTCAGATGATG ATGAAGGGGAGGACTCTGAGGAATATTCAGAAGAAGAAGGGAAAACATGGGAAGAGCTGG AAAGAGAAGCAAGCAATGCCGACAGAGAGAAAGGGGCTGAATCAGACAGTGACAATGATA GGAAGAGGAGGAATATGAAGCCTTTTGGGAAAGGTCGTCCTCCAGAGAGAAGAAATCTCT CTAGCAACATTTCCAAGAGACCCAGGTTTAGTAGTATATGCTGCATAAACTTGGATCTTA GAATAGTTTTTCTCTTTTTTCTGTGTTTGCCAAGTAGTGAATTCGTTTTTGACCTTGGTA CTTTTGTTTTTCAAAATTTACTCAGTTACTTGTCAGCTACATTTCTAGGACAATTGCTCG CCTATTACAGTGCAAAAGGTCTTGTTCCTATAATACCTGGGAATGTAGGTGCACCACCAG GTTGTTACTCGAGTGACACCCCACTGAGAAATGATCTGAGAGGTCTTTCTACCTGAACTT CATTCGTTTTCTGGCAGCAGAAGTAGGAGCAGCTCGTGACTTGCCAAAGTTCTTCTTCTT CCTCTTCTCATCCTCGCTATCTGATTCATTAATTTCCCTGTCTGCATAGCTTGCTTCTTT CTCCAGCTCTTCCCATGTTTTACCTTTTTCTTCCTCTGAATCTTCATCATCATCCTCTTC TTCATCATCTTCAGAGTCCACCAGAGATTCACTATCAGACTCATCA