Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g100720.3.1
CDS Infomation

Importin subunit alpha (AHRD V3.3 *** K4B1A3_SOLLC)
Sequence

ATGTCTCTTCGACCCAGCAATCGAACTGAAGTTCGCAAGAAATCTTACAAAATTGGGGTT
GATGCAGATGAAGCTCGTAGAAGGAGAGAGGACAATTTGGTTGAGATCAGGAAGAATAAG
CGAGAAGACAATCTTCTCAAGAAACGCAGAGAGGGTCTTCTTCTTCACTCTCAGCAATTA
CCCGATGCCACTCAAACCCCTGCTGCTATTGAGAAAAGGCTGGAAAGTATTCCTATTATG
GTCCAAGGAGTATGGTCAGAAGATCCTGCGGCGCAAGTCGAAGCAACTACTCATTTCAGG
AAGCTCTTATCGATTGAGCGCAGCCCTCCAATTGATGAGGTAATTAAAGCTGGAGTTATT
CCTCGATTTGTTGAATTTCTCGGACGGCAGGACTTACCTCAGCTTCAATTTGAAGCTGCC
TGGGCGTTGACAAATGTTGCATCTGGAACATCAGAACATACTCGTGTTGTGATTGACCAT
GGAGCTGTTCCTATGTTTGTACAACTTCTAAGCTCAACCAGTGATGATGTCCGTGAACAG
GCAGTCTGGGCTTTGGGCAATGTTGCCGGTGATTCCCCAAGTTGTAGAGATCTTGTTCTA
GGTCAGGGTGCATTGATGCCATTGCTAGCTCAGTTGAATGAACACTCAAAGCTTTCAATG
CTAAGAAATGCAACATGGACTCTTTCCAACTTTTGTCGAGGCAAACCACCAACACCATTT
GAGGCAGTCAGACCTGCATTACCAGTTCTTCAACAACTTATCCACATGAACGATGAAGAA
GTCTTGACAGATGCTTGCTGGGCTCTTTCTTATTTATCTGATGGACCAAATGATAAGATT
CAGGCTGTAATTGATGCGGGTGTCTGTCCACGACTAGTGGAGCTTCTTCTTCATCCATCG
CCTACTGTTCTCATACCTGCTCTCCGGACTGCGGGAAATATTGTTACTGGTGATGATGCT
CAAACACAGTTTGTGATTGACAACCAAGTCTTGCCATGTCTGTATCAATTGTTAACTCAA
AATCACAAGAAAAGCATCAAGAAAGAAGCATGTTGGACAATCTCTAATATCACTGCTGGA
AACAGAGCCCAAATACAGGCTGTTATTGAGGCGAATATTATTCTTCCTTTGGTACACCTA
TTGCAAAATGCAGAATTTGACATTAAGAAGGAGGCAGCTTGGGCTATCTCTAATGCTACC
TCTGGAGGATCTAATGACCAGATTAGGTTCTTGACTAGTCAAGGTTGCATTAAGCCACTA
TGTGATCTCCTAATTTGTCCAGATCCCAGAATCGTTACAGTATGCTTGGAGGGGCTCGAG
AATATACTGAAGGTGGGCGAGGTGGACAAAGAAGCTGGGACGAATGGTGGAATCAATATG
TATACACACATGATCGATGAATGTGATGGATTGGACAAGATTGAGAATCTCCAAACTCAC
GATAACAATGAGATATATGAGAAGGCTGTAAAGATCTTGGAGAAATACTGGGCTGAAGAA
GATGAAGAACAAAATCTCCCTGATGGTGCTGATGGAAATCCGCAAGGTTTCCAATTCGGA
AACAACCAGCCTAATGTTCCTGCAGGAGGATTCAAGTTTGGCTAG

Peptide Sequence

PEP ID

Solyc01g100720.3.1
PEP Infomation

Importin subunit alpha (AHRD V3.3 *** K4B1A3_SOLLC)
Sequence

MSLRPSNRTEVRKKSYKIGVDADEARRRREDNLVEIRKNKREDNLLKKRREGLLLHSQQL
PDATQTPAAIEKRLESIPIMVQGVWSEDPAAQVEATTHFRKLLSIERSPPIDEVIKAGVI
PRFVEFLGRQDLPQLQFEAAWALTNVASGTSEHTRVVIDHGAVPMFVQLLSSTSDDVREQ
AVWALGNVAGDSPSCRDLVLGQGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTPF
EAVRPALPVLQQLIHMNDEEVLTDACWALSYLSDGPNDKIQAVIDAGVCPRLVELLLHPS
PTVLIPALRTAGNIVTGDDAQTQFVIDNQVLPCLYQLLTQNHKKSIKKEACWTISNITAG
NRAQIQAVIEANIILPLVHLLQNAEFDIKKEAAWAISNATSGGSNDQIRFLTSQGCIKPL
CDLLICPDPRIVTVCLEGLENILKVGEVDKEAGTNGGINMYTHMIDECDGLDKIENLQTH
DNNEIYEKAVKILEKYWAEEDEEQNLPDGADGNPQGFQFGNNQPNVPAGGFKFG*

Transcript Sequence

Transcript ID

Solyc01g100720.3.1
Transcript Infomation

Importin subunit alpha (AHRD V3.3 *** K4B1A3_SOLLC)
Sequence

ACCAAAAATTAGGCTGTAATTTTCCGTAACGTGTCTTTAAAGCAAAAAACAAGAATACCC
AAAGTGAGAATTCTTCAATCTCTAAAAGCTTTTTCTCTTCTTCTCACTTTTCCAGTCTTG
TTTGTCTACAGAGAGGGAGAGGGAGAGGCATTGTCCCCTCAATTTCCCACAAAAAAAATG
TCTCTTCGACCCAGCAATCGAACTGAAGTTCGCAAGAAATCTTACAAAATTGGGGTTGAT
GCAGATGAAGCTCGTAGAAGGAGAGAGGACAATTTGGTTGAGATCAGGAAGAATAAGCGA
GAAGACAATCTTCTCAAGAAACGCAGAGAGGGTCTTCTTCTTCACTCTCAGCAATTACCC
GATGCCACTCAAACCCCTGCTGCTATTGAGAAAAGGCTGGAAAGTATTCCTATTATGGTC
CAAGGAGTATGGTCAGAAGATCCTGCGGCGCAAGTCGAAGCAACTACTCATTTCAGGAAG
CTCTTATCGATTGAGCGCAGCCCTCCAATTGATGAGGTAATTAAAGCTGGAGTTATTCCT
CGATTTGTTGAATTTCTCGGACGGCAGGACTTACCTCAGCTTCAATTTGAAGCTGCCTGG
GCGTTGACAAATGTTGCATCTGGAACATCAGAACATACTCGTGTTGTGATTGACCATGGA
GCTGTTCCTATGTTTGTACAACTTCTAAGCTCAACCAGTGATGATGTCCGTGAACAGGCA
GTCTGGGCTTTGGGCAATGTTGCCGGTGATTCCCCAAGTTGTAGAGATCTTGTTCTAGGT
CAGGGTGCATTGATGCCATTGCTAGCTCAGTTGAATGAACACTCAAAGCTTTCAATGCTA
AGAAATGCAACATGGACTCTTTCCAACTTTTGTCGAGGCAAACCACCAACACCATTTGAG
GCAGTCAGACCTGCATTACCAGTTCTTCAACAACTTATCCACATGAACGATGAAGAAGTC
TTGACAGATGCTTGCTGGGCTCTTTCTTATTTATCTGATGGACCAAATGATAAGATTCAG
GCTGTAATTGATGCGGGTGTCTGTCCACGACTAGTGGAGCTTCTTCTTCATCCATCGCCT
ACTGTTCTCATACCTGCTCTCCGGACTGCGGGAAATATTGTTACTGGTGATGATGCTCAA
ACACAGTTTGTGATTGACAACCAAGTCTTGCCATGTCTGTATCAATTGTTAACTCAAAAT
CACAAGAAAAGCATCAAGAAAGAAGCATGTTGGACAATCTCTAATATCACTGCTGGAAAC
AGAGCCCAAATACAGGCTGTTATTGAGGCGAATATTATTCTTCCTTTGGTACACCTATTG
CAAAATGCAGAATTTGACATTAAGAAGGAGGCAGCTTGGGCTATCTCTAATGCTACCTCT
GGAGGATCTAATGACCAGATTAGGTTCTTGACTAGTCAAGGTTGCATTAAGCCACTATGT
GATCTCCTAATTTGTCCAGATCCCAGAATCGTTACAGTATGCTTGGAGGGGCTCGAGAAT
ATACTGAAGGTGGGCGAGGTGGACAAAGAAGCTGGGACGAATGGTGGAATCAATATGTAT
ACACACATGATCGATGAATGTGATGGATTGGACAAGATTGAGAATCTCCAAACTCACGAT
AACAATGAGATATATGAGAAGGCTGTAAAGATCTTGGAGAAATACTGGGCTGAAGAAGAT
GAAGAACAAAATCTCCCTGATGGTGCTGATGGAAATCCGCAAGGTTTCCAATTCGGAAAC
AACCAGCCTAATGTTCCTGCAGGAGGATTCAAGTTTGGCTAGAAGATTAGTGAGTTTGTT
TTGTTTCATAGGTCTCTTCACTGTTTTTGGATCACAATTTTTAGACTATGTAATTGGATC
GTTTTGTCGCCAAGGGTCAGGGTTTTTGGTCTGGCACAAAGGCCTTTTGAATTGTCTGAA
AATGTAATGGTTTAGTTTGTGTTTTCTAAAATTTCAAAATCACATTACCAGAGTGTTCTT
TTGGCTGGCTGTTTGTGTGGGGTACATGGTATATTTATGGTTGAATTCATAATGTGTGTT
TTAAATGTTGCTCAAGAAAATTACCAGCAACTCAATTGGTCATATAGATGTTTTCTTGTG
AACCATCTTTCACCAGTTATATATTGCAAGTTTTATAGGATTTTATGTTGTATATGTCTA
CCACAAATCATAACGTCTATATCACAATCTTGCAGTGTTCCTATTCTATTCG