Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g100430.3.1
CDS Infomation	rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** K4B177_SOLLC)
Sequence	ATGGCGGGAGGGAAGATGAAGAAAGATAAGCCTCAGCGAGGGTCATCATCCGCTGCCTCA AATCCTCACTTCCAGGGAGGGATATCGTTCCACAAGTCGAAGGGTCAGCACATTCTGAAA AATCCTCTACTGGTTGATTCTATTGTCCAAAAATCCGGAATTAAATCTACCGATGTTATC CTCGAAATTGGTCCTGGTACCGGTAATCTTACTAAGAAGCTTCTAGAAGCTGGAAAGTCT GTTATTGCTGTTGAACTTGATCCTCGTATGGTTCTCGAGTTGCAACGAAGGTTTCAAGGA ACTCCTTTATCCAATCGACTGAAGGTTATACAAGGGGATGTTCTTAAGTGTGATCTCCCT TACTTCGATATTTGTGTGGCTAACATCCCATATCAAATATCATCTCCTCTCACCTTCAAA TTATTGGCTCATAGGCCTTTATTCAGAGCTGCAGTAATAATGTTCCAGAGAGAATTTGCT ATGAGACTTGTTGCTCAACCTGGTGACACTCTTTATTGCCGCCTTTCTGTGAACACACAG CTGTTGGCCCGAGTATCACACTTATTGAAGGTGGGAAAGAATAATTTCAGGCCACCACCA AAGGTTGATTCTTCTGTAGTTAGAATTGAACCTAGGGGACCACTTACTCCTGTCAATTTT AAGGAGTGGGATGGTTTGGTCAGGATCTGTTTCAACCGGAAAAACAAAACTATAGGTTCT ATTTTTAGACAAAAATCCGTGCTCAACATACTGGAAAAGAACTATAGAACTTTGCAAGCT TTACAGTTCTCTGAGAAAGCTCCTTCGAATGATATGGAAATGGCTTTGGATGTATCTACC TTGGGAGAGTCATTTGGAGACTTGAGTATGGATGCTGATGATGGAAATGATGACGATGAC ATTGAGATGGATGATGGTGATACGAAAAGAGCAGAATTCAAAGAGAGAGTTTTGGCAGTG CTGAAGGAAGGAAATTTTGAGGAAAAGAGATCCTCCAAGCTCGCTCAAGCAGATTTCATG CATCTACTTTCTCTCTTTAACAAGGCTGGAATTCATTTTTCTTGA

Peptide Sequence

PEP ID	Solyc01g100430.3.1
PEP Infomation	rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** K4B177_SOLLC)
Sequence	MAGGKMKKDKPQRGSSSAASNPHFQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVI LEIGPGTGNLTKKLLEAGKSVIAVELDPRMVLELQRRFQGTPLSNRLKVIQGDVLKCDLP YFDICVANIPYQISSPLTFKLLAHRPLFRAAVIMFQREFAMRLVAQPGDTLYCRLSVNTQ LLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRGPLTPVNFKEWDGLVRICFNRKNKTIGS IFRQKSVLNILEKNYRTLQALQFSEKAPSNDMEMALDVSTLGESFGDLSMDADDGNDDDD IEMDDGDTKRAEFKERVLAVLKEGNFEEKRSSKLAQADFMHLLSLFNKAGIHFS*

Transcript Sequence

Transcript ID	Solyc01g100430.3.1
Transcript Infomation	rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** K4B177_SOLLC)
Sequence	GCTCTGTATTCGCGGCAATTTTAGCTCCTAAAGGTTTAAGACAGTTACTCTCACCTCTTG ACGGGAATTTCTTTACCGGAGTCTCGCCCGGGAGCGTCGAAAAGTTTCATCATGGCGGGA GGGAAGATGAAGAAAGATAAGCCTCAGCGAGGGTCATCATCCGCTGCCTCAAATCCTCAC TTCCAGGGAGGGATATCGTTCCACAAGTCGAAGGGTCAGCACATTCTGAAAAATCCTCTA CTGGTTGATTCTATTGTCCAAAAATCCGGAATTAAATCTACCGATGTTATCCTCGAAATT GGTCCTGGTACCGGTAATCTTACTAAGAAGCTTCTAGAAGCTGGAAAGTCTGTTATTGCT GTTGAACTTGATCCTCGTATGGTTCTCGAGTTGCAACGAAGGTTTCAAGGAACTCCTTTA TCCAATCGACTGAAGGTTATACAAGGGGATGTTCTTAAGTGTGATCTCCCTTACTTCGAT ATTTGTGTGGCTAACATCCCATATCAAATATCATCTCCTCTCACCTTCAAATTATTGGCT CATAGGCCTTTATTCAGAGCTGCAGTAATAATGTTCCAGAGAGAATTTGCTATGAGACTT GTTGCTCAACCTGGTGACACTCTTTATTGCCGCCTTTCTGTGAACACACAGCTGTTGGCC CGAGTATCACACTTATTGAAGGTGGGAAAGAATAATTTCAGGCCACCACCAAAGGTTGAT TCTTCTGTAGTTAGAATTGAACCTAGGGGACCACTTACTCCTGTCAATTTTAAGGAGTGG GATGGTTTGGTCAGGATCTGTTTCAACCGGAAAAACAAAACTATAGGTTCTATTTTTAGA CAAAAATCCGTGCTCAACATACTGGAAAAGAACTATAGAACTTTGCAAGCTTTACAGTTC TCTGAGAAAGCTCCTTCGAATGATATGGAAATGGCTTTGGATGTATCTACCTTGGGAGAG TCATTTGGAGACTTGAGTATGGATGCTGATGATGGAAATGATGACGATGACATTGAGATG GATGATGGTGATACGAAAAGAGCAGAATTCAAAGAGAGAGTTTTGGCAGTGCTGAAGGAA GGAAATTTTGAGGAAAAGAGATCCTCCAAGCTCGCTCAAGCAGATTTCATGCATCTACTT TCTCTCTTTAACAAGGCTGGAATTCATTTTTCTTGA