Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g100200.3.1
CDS Infomation

gras4
Sequence

ATGGAAGCCCTTTTTCAAGAACAGCTTTTTCCTTGTGCTGATTCTTTTATTTTTAGGCAC
CCTTCCATTCCAATGGATCCAAGAAAAGAAGTTATACAAAATGGACTCAATAATCATCCT
AGTTTTGATCAAGATTACTTTTCAAATCATGTTGTTGGAGTGGGAGATTCTTCTCCTCCT
CCTCAAGAGGAAGGGGAAAAGGACTATTCTGATGCAATGTACAAATTCTTAAGTCAGATG
CTTATGGAAGAAGATGATTTGGAGAATAAGCCATGTATGTTTCATGACTGCATGGCTCTC
CAAGCTAAAGAGAGATACTTATCTGATGTACTTCATGGATCCGAAAACAACTATTCCCCA
CAATCTGTCATTATCAATCCACACGATTCCTCTAGTTTTCTCAGCAACTATTCACCTGAT
TCTATTGAGTCACCTCAATGGGATCTTAATTTCGAATCCCCTGCTTCCATGTCCACTTTA
TCTAATCATGACTCTTTCTTCACTTCCTTCGGCAATGGCCATTTTGAAGAAGGAGCTGTC
AATGTGTTACAAAGTGGCAGCAGCAGCAATTCACCAACTGGTCTGAGGGAAAAGAAAAAT
CGACATCGAGGAGATGTTGCTGCAGACCAGCAGAGGAGTAACAAACAGATGGCTACATTT
GTTCATGATGAATCTGAACCATTGGAAATGTATGACAATGTGTTGCTTTGTTTAAACAAT
CCATATGTGGAACAGCATAGTGCTACTAGTATCACTTCCTACTCGCCGCCTAATGAAGCC
AAAAAAACAAGCAAAGTTGGAAGGCCGAGAGGTGGTAGGAAGCATAGCAGCATTGTCAAG
AAGGAAATGGTGGATTTGAGGGCTTTGTTGACTCAGTGTGCGCAGGCCATGGCAAACTAT
GATAGCAGAACAGCTAATGAGCTGCTGATGCGGATAAGAGAACACTCTACACCTCATGGC
GATGGGACGGAGAGGTTGGCTCATTATCTTGCCAATGCCCTTGAAGCACGCCTGTCCGGC
ACGGGAACAGCTTTGTATACAGCCTACGCACCCAGTAGGATATCAGCTGCTAACATTTTG
AAAGCTTACAAGGCATTTATCAGAGCATGTCCATTCAAGTTGCTGTCAAACATTTTCGCA
AACAAGTATATCCGAAAGGTCATTGCTGGAGCACCAAAGATACACATAATTGATTTTGGT
ATCTTGTATGGTTTCCAATGGCCCTGTCTCATACAAGGTCTATCCATGAGGGCTGGGGGA
CCTCCAGAGCTTCGCATTACTGGAATCGATCTTCCCCAGCCAGGTTTCAAGCCAGCAGGG
AGGGTTGAGGAGACAGGGCGTCGCTTGGAAAAGTACTGCAAGCGATTTAGTGTCCCTTTC
GTATTCAAAGCCATCGCGAAGAAGTGGGAAAGCATCACGCTTGAAGAGCTTGAGGTTCAA
AGGGATGAAGTGTTGGTAGTTAACAGTTTGTATAGGCTAGGAAACATACCTGATGAGACA
GTAGTACCAAACAGTCCAAGGGATGCTGTCCTGAATTTAATCAGGAGGATCCGTCCTGAT
TTATTCATCCATGGTGCGTTGAACGGTACTTTCAACACTCCATTTTTCGTCACACGATTC
AGGGAGGCGCTTTTTCACTTCTCTTCACTGTATGATATGTTTGAGGCTACTCTTCCCCGC
GAGGACGAGGACAGAAAGCTATTCGAGGAAGAGGTTTTTGCAAGAGATGCTATGAACGTG
ATTGCTTGTGAAGGGACAGAGAGAGTTGAGAGACCTGAAACATACAAGCAGTGGCAACTT
AGATGCGTTAGAGCTGGATTCAAACAGGTGCCACTTGACCAGGAGATTGTGAAGATAGTG
AGGAATAAAGTGAGGTCGGAGTACCACAGGGACTTCTCAGTTGATGAAGATGGACACTGG
ATGCTACAAGGATGGAAAGGACGCGTAATTTACGCTCTCTCTTGTTGGAAGCCTACAAAG
CAGTCTGTAAAATTAGTCTAG

Peptide Sequence

PEP ID

Solyc01g100200.3.1
PEP Infomation

gras4
Sequence

MEALFQEQLFPCADSFIFRHPSIPMDPRKEVIQNGLNNHPSFDQDYFSNHVVGVGDSSPP
PQEEGEKDYSDAMYKFLSQMLMEEDDLENKPCMFHDCMALQAKERYLSDVLHGSENNYSP
QSVIINPHDSSSFLSNYSPDSIESPQWDLNFESPASMSTLSNHDSFFTSFGNGHFEEGAV
NVLQSGSSSNSPTGLREKKNRHRGDVAADQQRSNKQMATFVHDESEPLEMYDNVLLCLNN
PYVEQHSATSITSYSPPNEAKKTSKVGRPRGGRKHSSIVKKEMVDLRALLTQCAQAMANY
DSRTANELLMRIREHSTPHGDGTERLAHYLANALEARLSGTGTALYTAYAPSRISAANIL
KAYKAFIRACPFKLLSNIFANKYIRKVIAGAPKIHIIDFGILYGFQWPCLIQGLSMRAGG
PPELRITGIDLPQPGFKPAGRVEETGRRLEKYCKRFSVPFVFKAIAKKWESITLEELEVQ
RDEVLVVNSLYRLGNIPDETVVPNSPRDAVLNLIRRIRPDLFIHGALNGTFNTPFFVTRF
REALFHFSSLYDMFEATLPREDEDRKLFEEEVFARDAMNVIACEGTERVERPETYKQWQL
RCVRAGFKQVPLDQEIVKIVRNKVRSEYHRDFSVDEDGHWMLQGWKGRVIYALSCWKPTK
QSVKLV*

Transcript Sequence

Transcript ID

Solyc01g100200.3.1
Transcript Infomation

gras4
Sequence

ATGGAAGCCCTTTTTCAAGAACAGCTTTTTCCTTGTGCTGATTCTTTTATTTTTAGGCAC
CCTTCCATTCCAATGGATCCAAGAAAAGAAGTTATACAAAATGGACTCAATAATCATCCT
AGTTTTGATCAAGATTACTTTTCAAATCATGTTGTTGGAGTGGGAGATTCTTCTCCTCCT
CCTCAAGAGGAAGGGGAAAAGGACTATTCTGATGCAATGTACAAATTCTTAAGTCAGATG
CTTATGGAAGAAGATGATTTGGAGAATAAGCCATGTATGTTTCATGACTGCATGGCTCTC
CAAGCTAAAGAGAGATACTTATCTGATGTACTTCATGGATCCGAAAACAACTATTCCCCA
CAATCTGTCATTATCAATCCACACGATTCCTCTAGTTTTCTCAGCAACTATTCACCTGAT
TCTATTGAGTCACCTCAATGGGATCTTAATTTCGAATCCCCTGCTTCCATGTCCACTTTA
TCTAATCATGACTCTTTCTTCACTTCCTTCGGCAATGGCCATTTTGAAGAAGGAGCTGTC
AATGTGTTACAAAGTGGCAGCAGCAGCAATTCACCAACTGGTCTGAGGGAAAAGAAAAAT
CGACATCGAGGAGATGTTGCTGCAGACCAGCAGAGGAGTAACAAACAGATGGCTACATTT
GTTCATGATGAATCTGAACCATTGGAAATGTATGACAATGTGTTGCTTTGTTTAAACAAT
CCATATGTGGAACAGCATAGTGCTACTAGTATCACTTCCTACTCGCCGCCTAATGAAGCC
AAAAAAACAAGCAAAGTTGGAAGGCCGAGAGGTGGTAGGAAGCATAGCAGCATTGTCAAG
AAGGAAATGGTGGATTTGAGGGCTTTGTTGACTCAGTGTGCGCAGGCCATGGCAAACTAT
GATAGCAGAACAGCTAATGAGCTGCTGATGCGGATAAGAGAACACTCTACACCTCATGGC
GATGGGACGGAGAGGTTGGCTCATTATCTTGCCAATGCCCTTGAAGCACGCCTGTCCGGC
ACGGGAACAGCTTTGTATACAGCCTACGCACCCAGTAGGATATCAGCTGCTAACATTTTG
AAAGCTTACAAGGCATTTATCAGAGCATGTCCATTCAAGTTGCTGTCAAACATTTTCGCA
AACAAGTATATCCGAAAGGTCATTGCTGGAGCACCAAAGATACACATAATTGATTTTGGT
ATCTTGTATGGTTTCCAATGGCCCTGTCTCATACAAGGTCTATCCATGAGGGCTGGGGGA
CCTCCAGAGCTTCGCATTACTGGAATCGATCTTCCCCAGCCAGGTTTCAAGCCAGCAGGG
AGGGTTGAGGAGACAGGGCGTCGCTTGGAAAAGTACTGCAAGCGATTTAGTGTCCCTTTC
GTATTCAAAGCCATCGCGAAGAAGTGGGAAAGCATCACGCTTGAAGAGCTTGAGGTTCAA
AGGGATGAAGTGTTGGTAGTTAACAGTTTGTATAGGCTAGGAAACATACCTGATGAGACA
GTAGTACCAAACAGTCCAAGGGATGCTGTCCTGAATTTAATCAGGAGGATCCGTCCTGAT
TTATTCATCCATGGTGCGTTGAACGGTACTTTCAACACTCCATTTTTCGTCACACGATTC
AGGGAGGCGCTTTTTCACTTCTCTTCACTGTATGATATGTTTGAGGCTACTCTTCCCCGC
GAGGACGAGGACAGAAAGCTATTCGAGGAAGAGGTTTTTGCAAGAGATGCTATGAACGTG
ATTGCTTGTGAAGGGACAGAGAGAGTTGAGAGACCTGAAACATACAAGCAGTGGCAACTT
AGATGCGTTAGAGCTGGATTCAAACAGGTGCCACTTGACCAGGAGATTGTGAAGATAGTG
AGGAATAAAGTGAGGTCGGAGTACCACAGGGACTTCTCAGTTGATGAAGATGGACACTGG
ATGCTACAAGGATGGAAAGGACGCGTAATTTACGCTCTCTCTTGTTGGAAGCCTACAAAG
CAGTCTGTAAAATTAGTCTAG