Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g100130.3.1
CDS Infomation	RING/U-box protein (AHRD V3.3 - AT3G05670.3)
Sequence	ATGGCGAGGGGAGGCAACGGTGGACGCAAGACTAGTGATAGGAGAAAGGCTGGATCCACA TATAGAGCTTCAGATCAGTCAGATGAGGATTACACAGTTGATGACGATGAGGAGTTTGAT GAGTCAGAAGATGGATATTCTTCCTTTGTTGGAGATGATTCAGAAGAGAGTTTAGGTGAA TATGAAGAGGAGGAGGAGGAATTGAAGAGGAGGAAGGTGAAAAGGGTTGCTCGGTCAAAA GCACCAAGCAGAAAAGAAAAAGGAACTGTGAACTCTAGAAAGAGAAAGAGAGTTTCATAT AGAGAAGATGACAATGAGGATGATGAAGTAGATGAAGATGATGAGGAGTTCACACCAGAT TGCTTGGATGAAGAAAAAGAGTTTCCAGTGACGAAAGGGACAAATAATTCTAGCAAACGA CGGTTGCGTAAGGGCACTGTCAAAGATGAAGATGATGAGGAATTCACACCAGATTGCTTG GATGATGAAGAAGAGTTTCCAGTAATGAAAGGGACAAACAATTCTAGTAAGCGACGGTTG TGTAAGGGCACTGTCAAAGATGAAGATGATGAGGAATTCATACCAGACTGCTTGGATGTA GAAGAAGAAGAGTCTCCAGTAACGGAAGGGACGGATAATTCTAGCAAGCGTCAGTTATGT AAGGCCACTTTTAAAGATGAGGACGAGGATTTCACACCAGATTGCTTGGATAATGAAGAT GATGAAGAAGAAGAGTCTCCAGTAATGGAAGGGACGGATAATTCTAGCAAGCGACGGTTA CGTAGGGGCACTGTCAAAGATGAAGAAGATGAGGAATTAAATTCAGATGGCTGGCACGAA GAGGAGGATTTTCCAGTAATGAAAGGGATGAAGAATTCAAGCAGGCTACAGAGGCTTAAG GCCACTGCCAAAGATGATTACGAGGACGATGATGAAGAAGACAAGGATGATGAGGAATTC ACTCCAGTTAGCTTGGATGAAGAGGAGGATATCCCAATAACTAAAGGGATGAAGAATTCG AGCAAGCCACGGCTGTGTAAGGGCTCTACCAAAGATGATGACGAAGATGATGACGATGAT GAGGAATTCACTCCAGATGGCTTGGACGAAGAAGAAGAGGAAGAGTTTCCAGAAATGGAA GGGATAAAGTACTCAGCCAAGCCACGGTCACGTAAGGGCACTGCCAGAGTACAGAATAGA AATAGAAACCACAAAAAGTTGAAGAAGATCACAAGAAAGAAACCACTAAAGAGACGGCAA TTGAGAAGGAAAGCAAGATCTGAAAATGACGAGGAGTTCATAGACGTCGATCCAACCATG AAAGAAAAGAACAAAAAGAATGCAGGTCAGAGGAGAAAAAGAAAGAGACTAACAGTAGAT TCTGATTCTGATTTTGTTGCGAGTTCTGGATCATCTGAACGTGAGTTTACCATCTCTGAA GAAGAGAGGGAACAAGTCAGAGAGGCTAACAATTTTTGCAGGAGCTTGGTTACAACTTGG AGGGGCTCAGCATCTTTGAAAAAATCACCAATAGAGGAAGCTCCACGTCTACAAAGAAAA CATCCAGCAAGAAAGGCTAAAGAAAAGATGGAGGAGTTAAAGATTGAAGCCGGAAAGCAA ATTTGTGGCATATGTTTGTCTGAAGAAGGTAAGAGAACAGTTAGAGGGACATTGAATTGC TGCAGTCATTACTTTTGTTTTGCTTGTATCATGGAGTGGTCCAAAGTGGAATCTCGTTGC CCACTATGCAAGCAAAGGTTTGTGACAATCAGTAAGCCTGCGAGGTCAGACACTGGCTTT GATTTGAGGACTGTGGCTATTCAAGTCCCTGAACGTGATCAGGTTTATCAACCATCTGAA GAGGAGCTTAGGGGTTACCTTGACCCGTACGAAAATGTATTATGTACAGAGTGTCAGCAA GGTGGGGATGATGCTCTTATGCTACTTTGTGATCTCTGTGATTCGCCTGCGCATACTTAT TGTGTTGGTCTTGGACATGAAGTACCTGAAGGTAACTGGTACTGTGAAAGCTGTCGACCA ACTGCACTTGCTTCTTTAAACCCACAGAATCTGAATCCTATGCCTGATAATCGAACAAGC GGCAGTTTTTCTGTTGGGTCACCTCCTGTTGCGAATGTGAGAGAAACGTTTGATCTTAAT GAAATGTATGTTCCTGATACCCCTTTGACCGAAGAATCAGGTGATTTTCATTCTCCGCGA GATGGTCAAGTTTCTTCTCTAGCTTCTGGGATTGGGGCATTTACAGTTTCTGACCGCCGC AGAATACAACGGCAAATACATCAACTCCTTAATAACAGGAGGAGACAACTTGGTAATATT GCTGGGACCTCGGGTGCTGTATCAGGGAATAGTCTCTTTGGCTCTCAAATTGCTCGAAGT AGAGGATTAGCAAATCAACCTGCTATAGCACCTAGGGCAGTACCTCATAATTCATTTTTC CGAGGAAGGCAACTGGAGAGTGATGCTCATTTATCTCAAAATCCGAACCTTGTACCCGAG AGGGCAAGTCATTTGAGTGGGCAACTGAATTTGAATGGAGCCTCTACATCATCACAAAGT TTTTTTGGTGAATTTTTGGAAAGTGAATTGCAAGGGACTGATGCAAGTTTCAATTTTAAT CTGGTTCATCAGCAACTCCATCCCTGCAGTAGCAGCAGATCTAATGTTGGGCCTGATTCC AGCACTTCTCCTTGTCAATTTAGAGAGCCTGCAGTACCTTCAAGGACATTGCCCAGCACT CTTAGAAGACAATTTTAG

Peptide Sequence

PEP ID	Solyc01g100130.3.1
PEP Infomation	RING/U-box protein (AHRD V3.3 - AT3G05670.3)
Sequence	MARGGNGGRKTSDRRKAGSTYRASDQSDEDYTVDDDEEFDESEDGYSSFVGDDSEESLGE YEEEEEELKRRKVKRVARSKAPSRKEKGTVNSRKRKRVSYREDDNEDDEVDEDDEEFTPD CLDEEKEFPVTKGTNNSSKRRLRKGTVKDEDDEEFTPDCLDDEEEFPVMKGTNNSSKRRL CKGTVKDEDDEEFIPDCLDVEEEESPVTEGTDNSSKRQLCKATFKDEDEDFTPDCLDNED DEEEESPVMEGTDNSSKRRLRRGTVKDEEDEELNSDGWHEEEDFPVMKGMKNSSRLQRLK ATAKDDYEDDDEEDKDDEEFTPVSLDEEEDIPITKGMKNSSKPRLCKGSTKDDDEDDDDD EEFTPDGLDEEEEEEFPEMEGIKYSAKPRSRKGTARVQNRNRNHKKLKKITRKKPLKRRQ LRRKARSENDEEFIDVDPTMKEKNKKNAGQRRKRKRLTVDSDSDFVASSGSSEREFTISE EEREQVREANNFCRSLVTTWRGSASLKKSPIEEAPRLQRKHPARKAKEKMEELKIEAGKQ ICGICLSEEGKRTVRGTLNCCSHYFCFACIMEWSKVESRCPLCKQRFVTISKPARSDTGF DLRTVAIQVPERDQVYQPSEEELRGYLDPYENVLCTECQQGGDDALMLLCDLCDSPAHTY CVGLGHEVPEGNWYCESCRPTALASLNPQNLNPMPDNRTSGSFSVGSPPVANVRETFDLN EMYVPDTPLTEESGDFHSPRDGQVSSLASGIGAFTVSDRRRIQRQIHQLLNNRRRQLGNI AGTSGAVSGNSLFGSQIARSRGLANQPAIAPRAVPHNSFFRGRQLESDAHLSQNPNLVPE RASHLSGQLNLNGASTSSQSFFGEFLESELQGTDASFNFNLVHQQLHPCSSSRSNVGPDS STSPCQFREPAVPSRTLPSTLRRQF*

Transcript Sequence

Transcript ID	Solyc01g100130.3.1
Transcript Infomation	RING/U-box protein (AHRD V3.3 - AT3G05670.3)
Sequence	TTGTATAATTCGCTGGCCTATTTCGCTGCAATTGTATAATTTGCTTTGCATACAATTGAA TCGAATTAAAATGTAGGGCTAATAATAACTTGTGGTAACTTATTGGGCCTAAATTCATTC TAAAGGCCCATAAGCCTCATAGAATAAAACCCAACTTAGTGAGCCCAAAGTCAAAATAGC AGTTGAGCTGCTCTCAACATCACAGAGGGCAAATATGGAAATTACATATATCCTCAACCA ATAGCTTTACATCCAACTTGCTTCTTATAAAAGTGTCTGGGCCCAACGACCACTCGAAAA TATGAAATTAATTAAAAATATATATATTTTAAATTTATGAATAATTTAAATCGATCAACT GTATATAAAAATAATTTTCTTATAAAATTTAAAATAAATTTATAAATCAGATCTCCGAAA AACCTTCTAATAATAGATGCTTTTACTTTATCATTGCAATAATTTTTAATATTTTAAAAA CACTATCTCTTCTACCTATATAGAATATAGAAAGACAAAAATATGAGAAAAGTAGTAAAG AATACAAATACAGATTCTTTAGGTGACCCTCTTATTATTTCCTTCAAATTTCATCCCACC GCTTAATTTTTCTTTTTTATTTTTTTAAAAAATTGGATTGGTTTTTCGATTTTATATATA GCCAAGATAATTCTCTTTTATATTTTTTTGGGTTTTGCCGATTTTGCCTCCTCTTCTTTT CTCAGGTGCATTCACTTCCTTGTCTAATTAAGCGGTGGATCTAGTGGTACATGAGATTAT CATCACATAGTTAGATCTGATTCAAGTTGTCGGTTTGTGCTCCCCCTGGTTGTGAGAAAG GATGGCGAGGGGAGGCAACGGTGGACGCAAGACTAGTGATAGGAGAAAGGCTGGATCCAC ATATAGAGCTTCAGATCAGTCAGATGAGGATTACACAGTTGATGACGATGAGGAGTTTGA TGAGTCAGAAGATGGATATTCTTCCTTTGTTGGAGATGATTCAGAAGAGAGTTTAGGTGA ATATGAAGAGGAGGAGGAGGAATTGAAGAGGAGGAAGGTGAAAAGGGTTGCTCGGTCAAA AGCACCAAGCAGAAAAGAAAAAGGAACTGTGAACTCTAGAAAGAGAAAGAGAGTTTCATA TAGAGAAGATGACAATGAGGATGATGAAGTAGATGAAGATGATGAGGAGTTCACACCAGA TTGCTTGGATGAAGAAAAAGAGTTTCCAGTGACGAAAGGGACAAATAATTCTAGCAAACG ACGGTTGCGTAAGGGCACTGTCAAAGATGAAGATGATGAGGAATTCACACCAGATTGCTT GGATGATGAAGAAGAGTTTCCAGTAATGAAAGGGACAAACAATTCTAGTAAGCGACGGTT GTGTAAGGGCACTGTCAAAGATGAAGATGATGAGGAATTCATACCAGACTGCTTGGATGT AGAAGAAGAAGAGTCTCCAGTAACGGAAGGGACGGATAATTCTAGCAAGCGTCAGTTATG TAAGGCCACTTTTAAAGATGAGGACGAGGATTTCACACCAGATTGCTTGGATAATGAAGA TGATGAAGAAGAAGAGTCTCCAGTAATGGAAGGGACGGATAATTCTAGCAAGCGACGGTT ACGTAGGGGCACTGTCAAAGATGAAGAAGATGAGGAATTAAATTCAGATGGCTGGCACGA AGAGGAGGATTTTCCAGTAATGAAAGGGATGAAGAATTCAAGCAGGCTACAGAGGCTTAA GGCCACTGCCAAAGATGATTACGAGGACGATGATGAAGAAGACAAGGATGATGAGGAATT CACTCCAGTTAGCTTGGATGAAGAGGAGGATATCCCAATAACTAAAGGGATGAAGAATTC GAGCAAGCCACGGCTGTGTAAGGGCTCTACCAAAGATGATGACGAAGATGATGACGATGA TGAGGAATTCACTCCAGATGGCTTGGACGAAGAAGAAGAGGAAGAGTTTCCAGAAATGGA AGGGATAAAGTACTCAGCCAAGCCACGGTCACGTAAGGGCACTGCCAGAGTACAGAATAG AAATAGAAACCACAAAAAGTTGAAGAAGATCACAAGAAAGAAACCACTAAAGAGACGGCA ATTGAGAAGGAAAGCAAGATCTGAAAATGACGAGGAGTTCATAGACGTCGATCCAACCAT GAAAGAAAAGAACAAAAAGAATGCAGGTCAGAGGAGAAAAAGAAAGAGACTAACAGTAGA TTCTGATTCTGATTTTGTTGCGAGTTCTGGATCATCTGAACGTGAGTTTACCATCTCTGA AGAAGAGAGGGAACAAGTCAGAGAGGCTAACAATTTTTGCAGGAGCTTGGTTACAACTTG GAGGGGCTCAGCATCTTTGAAAAAATCACCAATAGAGGAAGCTCCACGTCTACAAAGAAA ACATCCAGCAAGAAAGGCTAAAGAAAAGATGGAGGAGTTAAAGATTGAAGCCGGAAAGCA AATTTGTGGCATATGTTTGTCTGAAGAAGGTAAGAGAACAGTTAGAGGGACATTGAATTG CTGCAGTCATTACTTTTGTTTTGCTTGTATCATGGAGTGGTCCAAAGTGGAATCTCGTTG CCCACTATGCAAGCAAAGGTTTGTGACAATCAGTAAGCCTGCGAGGTCAGACACTGGCTT TGATTTGAGGACTGTGGCTATTCAAGTCCCTGAACGTGATCAGGTTTATCAACCATCTGA AGAGGAGCTTAGGGGTTACCTTGACCCGTACGAAAATGTATTATGTACAGAGTGTCAGCA AGGTGGGGATGATGCTCTTATGCTACTTTGTGATCTCTGTGATTCGCCTGCGCATACTTA TTGTGTTGGTCTTGGACATGAAGTACCTGAAGGTAACTGGTACTGTGAAAGCTGTCGACC AACTGCACTTGCTTCTTTAAACCCACAGAATCTGAATCCTATGCCTGATAATCGAACAAG CGGCAGTTTTTCTGTTGGGTCACCTCCTGTTGCGAATGTGAGAGAAACGTTTGATCTTAA TGAAATGTATGTTCCTGATACCCCTTTGACCGAAGAATCAGGTGATTTTCATTCTCCGCG AGATGGTCAAGTTTCTTCTCTAGCTTCTGGGATTGGGGCATTTACAGTTTCTGACCGCCG CAGAATACAACGGCAAATACATCAACTCCTTAATAACAGGAGGAGACAACTTGGTAATAT TGCTGGGACCTCGGGTGCTGTATCAGGGAATAGTCTCTTTGGCTCTCAAATTGCTCGAAG TAGAGGATTAGCAAATCAACCTGCTATAGCACCTAGGGCAGTACCTCATAATTCATTTTT CCGAGGAAGGCAACTGGAGAGTGATGCTCATTTATCTCAAAATCCGAACCTTGTACCCGA GAGGGCAAGTCATTTGAGTGGGCAACTGAATTTGAATGGAGCCTCTACATCATCACAAAG TTTTTTTGGTGAATTTTTGGAAAGTGAATTGCAAGGGACTGATGCAAGTTTCAATTTTAA TCTGGTTCATCAGCAACTCCATCCCTGCAGTAGCAGCAGATCTAATGTTGGGCCTGATTC CAGCACTTCTCCTTGTCAATTTAGAGAGCCTGCAGTACCTTCAAGGACATTGCCCAGCAC TCTTAGAAGACAATTTTAGCTGCATTTGCTCGAGCATGGTGAAGTGAAGCCCCCTGTGCA GTCTACCATAATTTGTATAATTAAATTGGGAGACAGGCTGGCAGCCAAATCTCCCCTGTG GAGGATCGCTGTACTCTTGCCTCTTTTGAGTGAAATCACGAGTATAGAAGACATGCTGTT TGTTGAAGCAGTGGGATTTGATGTGCGACTTCTCAGAAATAGCATTAGCCATTCTTTCTG CCCATTGACCATGCCGGACAGATCCATTTGTTAGGATAGATTTTTCAGCTTTACACTTGT ACACCACGCTTAACTGACAAAAGATTCCTTGATTGTTGTCAAAAATATGCAACCGCTGTT GTTGCCATTGTTATTTATTAGCCAATTTGTTATCCGAGATTGATACTCAGCTCTGTTTGG ATATGTTGGAAATTTACCATTGACAATGGTAACTGCTGTTTTTCTTGTTGCAAGTTGTAA CTGGTTCTTTTTGGCCCAACTTACTGTTCACTTGTAGATGGCATGGTATGACCGTGCCAG TTACTGCTTTTCGGGAGTTGGATAAATGCCATAGGCTGCATCTTAATTTCCACGCCAAAA ATGTTAAACTGCATATTCTTAGGGGCACTATTCGATTGGCAAGGAGATGAAGAGAGAGAG TTAAAACCAACTTGAACATTTATTATATTCTTTACGGTAGTAGCATGAGCTGCAATAAAA GAAGATACATGAAGAGTCTGTCGCCTAAAAACTAAATTCTACAAACAACAAGATAGATTA CATGGATTACTACATCTTATTCCACGGTTGGATTACAATTGTGCCAGCATGCACACTGTG CTGGATCACTAACCACACGGATTCATCAGTGAACTGGTAGCATTCATGTCAACCTCTATA AATTATCATCCAGAATGGTAGACAATAGCAATCCTTGAACAAACGAACTCCTCTTTGCCT TCTCCTCTTGATCCTTGATTGACAATGGGGCCTCTTGAACTTTCCTGCAAAATAAGTTTA AATACACCATAACACTATGCGAGTTACCAGTACAACAACAAATACCCAGTGCTAGATATA TAAGATCCGAAAGTAACGGAACAACAAGGAAGATACTATATATCATGGTAAAGACATCTT AGATTCCTATTCCCTTCATCAGATTATAAAGCAAAAAAAAAAAAAGGAATAACTATTTCT CTTCTGCTTTTTCGGAAGTTTTCTATCGAAGGAACTGATAACAAAGATATCCTAAGGTAC ACTATACTAGAACAACCCAATAATAACACCACTAATTCATTTATGAAAATAAAAACTTTA ATTCCGGTCTATTTGACCATAGAAAACAGTGATTTCCATTTCATGTCACAAGTTGATAGA AGCCACCAATAAGAGCGAGTCTAGCAGAATTCTAGTTGACCATTAATCCCTTAAGCATGA ATAGAAGGCAGAAATTATGTTAGCAAAAATTTCAGACTTCTGCCTGCTTCACTATATGCA GCTCAAAAGCAGTAAACCAGATACTTTTAGCACACCCAAATTATACCAAACTACATTGGG TTCGCTTCTTCACGGGTGCATACCCAATACTGAACCAAAATTAGTTCAATTTGTTTTTTC TAATTTGGTCCATTTCGGTTCTTCAGTCATGGAGATCATGAAAACAATGTGGAAACGGAA ATGCAGAACTATGTCCTCGTTCACTGACGATGATGATCGATGACGTAGAAAAAATAAAGA AGCTGCTTTTAGAATCTCCTTTTCCTTTGCTCTTAGTATAAATAGTCATTGCATACTGCT GCTTCTACTCACCACTCTTCCTTCCTCTTCTCTTGCATTAATCAAATGAAAATGAGAGGA GCATATAGATAGAGAGAGAGTGAGACAGATTTCTAGGAACTGTCAAAACTCTTCAAGGAA GTCACGCTTCTTCTCTCATGAATTGAGTGCCAGTTCAAAGCTCTCACTCTTGCTTCCTCT CATGACAAAGAAATTGGTTTCAGGACCCTAAAACCGAATACCGAAGAACTGAAATCGGTC TCCTTTTTTCTGGTTTTTATTCCCATTCCTACCTTAAATTACCAGGACGACTAAAACAAA TTAATGTTAGATCACTTGTGTTTGTTCTTCTAAAAAAGTAGGACTAACCACAATACATGT ACGGCTGTACCTAATCAAAAGGTTGATGACATACAGCTTGGAACAAAAGAACCAGGTACT TATGGTCAAAGCCCTAAGCACTTCACCCAGAAGTTAAAGGTGTTCGCCCAGTCTTTCCAC AAGTACCACAGGTGACTTCTATTCTAAAGCTACCACCAAGGGTGGGGTATCACAGTCAAA AGTCAAATCTCCAGGCTC