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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g099690.3.1
CDS Infomation

ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4B103_SOLLC)
Sequence

ATGGCCACGTGCTTGCGGTTGCCCATGGCGTCCTCAATTCCATGTTCTTCATCTTCATCG
ATGACACTGAAACACCGTAGCTTCAATTTTCGGTGTGCAGCCTATAGCAATAGCAGTTCA
AACATTCCGATGCCTCCTTTTAACCCTAAGGACCCATTTCTAAGTAAGCTTGCCTCTGTT
GCTGCAAATAATCCAGATGCACTCTTCTCTCGGCCTCAAAATTCTGATATGCCGCCATTT
TTGGACATTTACGACTCCCCTAAGCTCATGGCTACTCCTGCTCAGGTGGAGAGATCAGTA
TCATACAATGAGCACAGAGCGAGTACACCTCCACCAGACTTGCCCTCTATGTTGCTCCAT
GGTAGAATAGTTTATATTGGCATGCCGTTGGTGTCAGCAGTCACAGAGCTTGTGATTGCA
GAGTTGATGTACCTACAATATATGGATCCTAAAGCGCCAATTTATCTATACATAAATTCT
ACTGGGACTACCCGTGATGATGGTGAAACGGTTGGTATGGAAGCAGAAGGTTTTGCAATT
TATGATTCCATGATGCAACTTCAAAACGAGATACACACTGTAGCAGTTGGTGCTGCCATA
GGTCAGGCATGTCTATTGCTTGCAGCTGGTACTAAGGGCAAAAGGTTTATGATGCCACAT
GCCAAAGCCATGATTCAACAGCCCCGTGCACCATCATCTGGATTAATGCAGGCCAGCGAT
GTTTATATCCGGGCAAAGGAGGTACTCGTTAACAGAGACAACCTTGTCAAGCTTTTGGCT
AAACATACTGAAAATTCGGAAGAGACTGTTTCCAATGTTATGAGAAGACCATATTACATG
GATTCTATCAAAGCTAGAGAATTTGGCGTTATTGATAAGATTCTTTGGCGTGGCCAGGAG
CAGGAGCAGATTATTGCAAGTGTTGATGCACCAGAGGTGTGGGACAATAGGGCAGGCATC
AAAGTTGCTGATGCTTTTTAG

Peptide Sequence

PEP ID

Solyc01g099690.3.1
PEP Infomation

ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4B103_SOLLC)
Sequence

MATCLRLPMASSIPCSSSSSMTLKHRSFNFRCAAYSNSSSNIPMPPFNPKDPFLSKLASV
AANNPDALFSRPQNSDMPPFLDIYDSPKLMATPAQVERSVSYNEHRASTPPPDLPSMLLH
GRIVYIGMPLVSAVTELVIAELMYLQYMDPKAPIYLYINSTGTTRDDGETVGMEAEGFAI
YDSMMQLQNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPRAPSSGLMQASD
VYIRAKEVLVNRDNLVKLLAKHTENSEETVSNVMRRPYYMDSIKAREFGVIDKILWRGQE
QEQIIASVDAPEVWDNRAGIKVADAF*

Transcript Sequence

Transcript ID

Solyc01g099690.3.1
Transcript Infomation

ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4B103_SOLLC)
Sequence

CATTGGTTATACTTCTAGACCTCAGTTTCTTCTTTTCAAGCTTCCGTTGAAAGAGACCAG
AAGAATCGAAATTCATCCGTGGAGAAATCATGGCCACGTGCTTGCGGTTGCCCATGGCGT
CCTCAATTCCATGTTCTTCATCTTCATCGATGACACTGAAACACCGTAGCTTCAATTTTC
GGTGTGCAGCCTATAGCAATAGCAGTTCAAACATTCCGATGCCTCCTTTTAACCCTAAGG
ACCCATTTCTAAGTAAGCTTGCCTCTGTTGCTGCAAATAATCCAGATGCACTCTTCTCTC
GGCCTCAAAATTCTGATATGCCGCCATTTTTGGACATTTACGACTCCCCTAAGCTCATGG
CTACTCCTGCTCAGGTGGAGAGATCAGTATCATACAATGAGCACAGAGCGAGTACACCTC
CACCAGACTTGCCCTCTATGTTGCTCCATGGTAGAATAGTTTATATTGGCATGCCGTTGG
TGTCAGCAGTCACAGAGCTTGTGATTGCAGAGTTGATGTACCTACAATATATGGATCCTA
AAGCGCCAATTTATCTATACATAAATTCTACTGGGACTACCCGTGATGATGGTGAAACGG
TTGGTATGGAAGCAGAAGGTTTTGCAATTTATGATTCCATGATGCAACTTCAAAACGAGA
TACACACTGTAGCAGTTGGTGCTGCCATAGGTCAGGCATGTCTATTGCTTGCAGCTGGTA
CTAAGGGCAAAAGGTTTATGATGCCACATGCCAAAGCCATGATTCAACAGCCCCGTGCAC
CATCATCTGGATTAATGCAGGCCAGCGATGTTTATATCCGGGCAAAGGAGGTACTCGTTA
ACAGAGACAACCTTGTCAAGCTTTTGGCTAAACATACTGAAAATTCGGAAGAGACTGTTT
CCAATGTTATGAGAAGACCATATTACATGGATTCTATCAAAGCTAGAGAATTTGGCGTTA
TTGATAAGATTCTTTGGCGTGGCCAGGAGCAGGAGCAGATTATTGCAAGTGTTGATGCAC
CAGAGGTGTGGGACAATAGGGCAGGCATCAAAGTTGCTGATGCTTTTTAGGTCCTTTCAA
TATATAATCCGATGGGAATATTGACGGAAGCATTTCAACTATCAAGGGGACTGAAACTCT
TTCATTTCACTAGTAAAGAGTGTTACCAAATGAGAGAAAATTCTGGTTTGTGCAAGTCTT
GAAATGTACGCACTCGCTGTAGCTCTCCAAGATTATACAAGTATCATGATGAGATACTTA
CTACATAGTAACCAAGAATAGGATTTTCGCTTTGTATTAAAAGCATTGTACACAAATTGT
TGTTGGTTTCTGAATTTGTGAGTGAGTCGAACAATTATCAGCTCATGGGCAAATTTTTTC
TCTCTCTAGATTATGAATTTACCCACGTTTCTATATCCTATTTTTCCTTGAATAATTGGA
AAAGGTCATCTCGTGAGAAATTCGTGGCGATAACTTGAGTCATCAAACCAGTCACGATAT
GCCCTAAATTATAGAGAACTATACT