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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g099680.3.1
CDS Infomation

Rubber elongation factor protein, putative (AHRD V3.3 *** B9RFA8_RICCO)
Sequence

ATGGCCGAAACAAACCCTAAGCCTCAACAACCCGCCGAGATGGCTCAGATTGATGGAGAG
AAATTGAAGTATTTGGAATTCTTGCAAGTGGCGATGATTCATGCGGCGCTATGTGTGGTG
AAGGTGTATGGCTACGCTAAAGAGAATTCTGGTCCATTGAAGCCTGGTGTTCAGACTGTT
GAAGGCACCGTTAAGACCGTGGTTGGCCCTGTTTATGATAAATATCATGATGTTCCCGTC
GAAGTCCTCAAGTTTGTTGACCGCAAGGTTGATCAGTCTGTTCGTACGATTGAAACTCGT
GTCCCCCCTATGGTCAAGCAAGCTCCTGCAGCTGCTCGCTCTGTTGCAGCTGATGTCAAA
AGTGCTGGTGTGATGGGAGCTGCATCAGGACTTGCTAAAACAGTCTATGCCAAGTATGAG
CCCACCGCTAAGGGACTTTACACCAAATACGAGCCAATGGCCGAGCAGTATGCTGCATCA
GCTTGGCTCTCTCTCAACAAATTTCCCATTGTTCCTAAAGTTACTCAAGCGGTTGTTCCA
ACAGCTGCTTACTATTCCGAGAAATACAATGTGATGGTTCAGCAAACAGCAGAGAAGGGA
TACAAGGTTGCTTCATATCTTCCATTGGTACCTACAGAGAAGATTGCTAAGGTGTTCAGT
ACTCAGCCTGTGGCTTCCAGCTAA

Peptide Sequence

PEP ID

Solyc01g099680.3.1
PEP Infomation

Rubber elongation factor protein, putative (AHRD V3.3 *** B9RFA8_RICCO)
Sequence

MAETNPKPQQPAEMAQIDGEKLKYLEFLQVAMIHAALCVVKVYGYAKENSGPLKPGVQTV
EGTVKTVVGPVYDKYHDVPVEVLKFVDRKVDQSVRTIETRVPPMVKQAPAAARSVAADVK
SAGVMGAASGLAKTVYAKYEPTAKGLYTKYEPMAEQYAASAWLSLNKFPIVPKVTQAVVP
TAAYYSEKYNVMVQQTAEKGYKVASYLPLVPTEKIAKVFSTQPVASS*

Transcript Sequence

Transcript ID

Solyc01g099680.3.1
Transcript Infomation

Rubber elongation factor protein, putative (AHRD V3.3 *** B9RFA8_RICCO)
Sequence

CTGAACGCTAACCAAACACAAAACCCCAAACGTCATAACTTTTATTCAATTTCCGATTCT
TCGTTCATATCGAAATCTCTCTGATCTTTTGACCATGGCCGAAACAAACCCTAAGCCTCA
ACAACCCGCCGAGATGGCTCAGATTGATGGAGAGAAATTGAAGTATTTGGAATTCTTGCA
AGTGGCGATGATTCATGCGGCGCTATGTGTGGTGAAGGTGTATGGCTACGCTAAAGAGAA
TTCTGGTCCATTGAAGCCTGGTGTTCAGACTGTTGAAGGCACCGTTAAGACCGTGGTTGG
CCCTGTTTATGATAAATATCATGATGTTCCCGTCGAAGTCCTCAAGTTTGTTGACCGCAA
GGTTGATCAGTCTGTTCGTACGATTGAAACTCGTGTCCCCCCTATGGTCAAGCAAGCTCC
TGCAGCTGCTCGCTCTGTTGCAGCTGATGTCAAAAGTGCTGGTGTGATGGGAGCTGCATC
AGGACTTGCTAAAACAGTCTATGCCAAGTATGAGCCCACCGCTAAGGGACTTTACACCAA
ATACGAGCCAATGGCCGAGCAGTATGCTGCATCAGCTTGGCTCTCTCTCAACAAATTTCC
CATTGTTCCTAAAGTTACTCAAGCGGTTGTTCCAACAGCTGCTTACTATTCCGAGAAATA
CAATGTGATGGTTCAGCAAACAGCAGAGAAGGGATACAAGGTTGCTTCATATCTTCCATT
GGTACCTACAGAGAAGATTGCTAAGGTGTTCAGTACTCAGCCTGTGGCTTCCAGCTAAGA
AGGACCTACTGGTTTACTTAATGATTCACAAGTAGCAGTTTAGTTCTATGTGAGGTTCTT
TATATGATCTGGAGTGCTTTGAAAACAGTTTTTATTTGTT