Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g099620.3.1
CDS Infomation

Respiratory burst oxidase, putative (AHRD V3.3 *** B9RFA3_RICCO)
Sequence

ATGGAGATCGAAAACACGACAGATAGTGTGAGAGGATCGAGAGTAGGATTCAGCGGTTCA
TTAGTTAGTGGGAAGAAAAGTGCAAGGTTCAAAGATGATGAATCGTATGTAGAGATCACT
CTTGATGTTCGCGATGATTCTGTTTTGGTTCAAAACATTAAAGGTGCTGATCATGAAGCT
GCATTGTTAGCTAGCAAGCTCGAAAAGAGGCCTAACCATACGCTTGGCTCACAGCTTTCG
TTTCATTTGAAACAAGTTTCAAAGGAATTGAAAAGAATGACTTCTTCTAATAAGTTTCAG
AAAATTGATAGGAGTAAGTCTGGTGCTGCTCGTGCTCTACGTGGACTTCAGTTCATGAAC
AGGAATGTAGGAACTGAAGGATGGTCTGAAGTTGAATCGCGATTCGATCAACTTGCTGTT
GATGGAATGCTAGCAAAAACATTGTTTGGTCAATGCATAGGTATGAAGGAATCAAGTGAG
TTTGCTGAGGAATTATTTGATGCTCTAGCTAGGAAGAGATGCATCACATCTCCTGCGGTG
ACTAAGGATGAACTGCACGAATTCTGGGAACAAATAACTGATACTAGCTTTGATGCCCGG
CTTCAAACTTTCTTCGACATGGTGGATAAAGATGCAGATGGGAGAATTACTGAAGAAGAG
GTGAAAGAGATCATCAGTCTTAGTGCTTCTGCAAATAAGCTGTCAAAAATCGAGGACAAT
TCAGATGAATATGCAGCTCTCATCATGGAAGAACTAGATCCAGGCAATGTTGGATACATT
GAGCTGTACAACTTGGAGACTTTGCTTCTTCAGGCCCCGAGCCACTCGATGAATCTTTCA
ACTAACAGCAGAGTTCTGAGTCAGATGCTAAGTCAGAAGCTTAAGCCAACGAAAGAGCGA
AATCCCTTTAAAAGATGCAAAAGAAGGCTGGACTATTTCATTGAGGACAATTGGAAGAGG
ATTTGGGTGATGGTTTTGTGGCTATCAATCTGTGCAGGACTCTTTACATGGAAATTTATT
CAATATAAACGTCGCGCTGTCTTTGATGTTATGGGCTATTGTGTCTCTGTAGCTAAAGGA
GGTGCTGAAACAACAAAATTTAACATGGCTCTAGTTCTTTTGCCAGTATGCAGAAACACC
ATAACTTGGCTAAGAAGTAGGACTAAGCTCGGGAAAATAATTCCTTTTGATGATAACATC
AATTTCCACAAGGTAATTGCATTTGGAGTAGCAGTTGGTGTAGGCTTACATGCAATTTCA
CACTTAACATGTGATTTTCCCCGGCTGTTACATGCCACGGATGAGGAATACGAGCCAATG
AAGCCATTTTTTGGAGATGAAAGACCAAACAACTACTGGTGGTTTGTGAAAGGCACGGAA
GGATGGACCGGTGTTGTGATGGTTGTCCTTATGATCATAGCGTATGTACTAGCCCAACCA
TGGTTTCGTAGAAACCGACTCAATCTTCCATCAACAATCAAGAAACTCACTGGATTTAAC
GCTTTTTGGTACTCCCATCACTTATTCGTTATAGTCTATGTCCTCTTCATCATTCACGGA
TACTTCCTCTACCTCTCGAAAAAATGGTACAAGAAGACAACATGGATGTATATCGCGGTG
CCTATGATACTATATGCTTGTGAACGTCTGCTTCGTGCATTTAGGTCCGGGTACAAGGCA
GTGAGGATTTTGAAGGTAGCTGTATATCCTGGAAATGTAATGGCAGTGCACATGTCTAAG
CCTCAGGGCTTTAAGTACACAAGTGGACAGTACATTTTTGTGAACTGTTCTGATGTTTCT
TCATTTCAATGGCATCCTTTTACCATCTCCTCAGCTCCGGGAGATGATTACCTAAGTGTG
CACATTCGAACATTGGGCGATTGGACATCTCAGCTTAAAACTCTCTTTTCTAAGGTCTGT
GAGCCTCCAACTGGTGATCAAAGTGGCCTTTTAAGAGCAGATATAGGGAAAGCTGACTAT
AAGCCTAGATTGCCAAAACTATTGATTGATGGCCCTTATGGAGCACCAGCACAGGATTAC
AAGAAATACGACGTAGTCCTCTTAGTAGGCCTTGGCATTGGAGCAACACCTTTGATAAGC
ATAGTAAAAGATGTGCTCAATAACATCAACCAACAAAAGGACATTGAAGATGGTACTAAG
GGTAGTAAAAAAAGTCCTTTTGCAACTAAACGAGCTTACTTCTATTGGGTAACACGCGAG
CAAGGCTCGTTTGAGTGGTTTAAGGGTGTGATGGATGAGGTCTCGGAGAACGATCAAGAA
GGCCTAATTGAGCTTCACAACTACTGCACCAGCGTTTATGAAGAAGGCGATGCCCGGTCT
GCACTAATCACAATGCTTCAATCAATCCACCAAGCTAAGAGTGGCGTAGACATTGTCTCT
GGGACAAGAGTCAAGACTCATTTTGCTAGACCAAATTGGCGCCAAGTTTTCAAACGTGTT
ACAATTAATCATCCTGATCAAAAAATTGGTGTGTTTTATTGTGGCCCACAAGGTCTAGTT
GGAGAACTAAGACATCTATCTCAAGATTTCTCACACAAGACAGACACAAAGTTTGAATTT
CATAAAGAAAATTTCTAA

Peptide Sequence

PEP ID

Solyc01g099620.3.1
PEP Infomation

Respiratory burst oxidase, putative (AHRD V3.3 *** B9RFA3_RICCO)
Sequence

MEIENTTDSVRGSRVGFSGSLVSGKKSARFKDDESYVEITLDVRDDSVLVQNIKGADHEA
ALLASKLEKRPNHTLGSQLSFHLKQVSKELKRMTSSNKFQKIDRSKSGAARALRGLQFMN
RNVGTEGWSEVESRFDQLAVDGMLAKTLFGQCIGMKESSEFAEELFDALARKRCITSPAV
TKDELHEFWEQITDTSFDARLQTFFDMVDKDADGRITEEEVKEIISLSASANKLSKIEDN
SDEYAALIMEELDPGNVGYIELYNLETLLLQAPSHSMNLSTNSRVLSQMLSQKLKPTKER
NPFKRCKRRLDYFIEDNWKRIWVMVLWLSICAGLFTWKFIQYKRRAVFDVMGYCVSVAKG
GAETTKFNMALVLLPVCRNTITWLRSRTKLGKIIPFDDNINFHKVIAFGVAVGVGLHAIS
HLTCDFPRLLHATDEEYEPMKPFFGDERPNNYWWFVKGTEGWTGVVMVVLMIIAYVLAQP
WFRRNRLNLPSTIKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKKTTWMYIAV
PMILYACERLLRAFRSGYKAVRILKVAVYPGNVMAVHMSKPQGFKYTSGQYIFVNCSDVS
SFQWHPFTISSAPGDDYLSVHIRTLGDWTSQLKTLFSKVCEPPTGDQSGLLRADIGKADY
KPRLPKLLIDGPYGAPAQDYKKYDVVLLVGLGIGATPLISIVKDVLNNINQQKDIEDGTK
GSKKSPFATKRAYFYWVTREQGSFEWFKGVMDEVSENDQEGLIELHNYCTSVYEEGDARS
ALITMLQSIHQAKSGVDIVSGTRVKTHFARPNWRQVFKRVTINHPDQKIGVFYCGPQGLV
GELRHLSQDFSHKTDTKFEFHKENF*

Transcript Sequence

Transcript ID

Solyc01g099620.3.1
Transcript Infomation

Respiratory burst oxidase, putative (AHRD V3.3 *** B9RFA3_RICCO)
Sequence

ATCACCGTTCTTCTATAATTTCTCAACATATTACTATTTTTTCAATCTTTCTCAGAATTT
ATTTTTTTTACATTTTTGTTACATAGGTCGATACTAGTTATAAATTTCATTTTGAAAAAA
AACAGAGGAAAAAAGAGCGGGAAAATCAAATGGAGATCGAAAACACGACAGATAGTGTGA
GAGGATCGAGAGTAGGATTCAGCGGTTCATTAGTTAGTGGGAAGAAAAGTGCAAGGTTCA
AAGATGATGAATCGTATGTAGAGATCACTCTTGATGTTCGCGATGATTCTGTTTTGGTTC
AAAACATTAAAGGTGCTGATCATGAAGCTGCATTGTTAGCTAGCAAGCTCGAAAAGAGGC
CTAACCATACGCTTGGCTCACAGCTTTCGTTTCATTTGAAACAAGTTTCAAAGGAATTGA
AAAGAATGACTTCTTCTAATAAGTTTCAGAAAATTGATAGGAGTAAGTCTGGTGCTGCTC
GTGCTCTACGTGGACTTCAGTTCATGAACAGGAATGTAGGAACTGAAGGATGGTCTGAAG
TTGAATCGCGATTCGATCAACTTGCTGTTGATGGAATGCTAGCAAAAACATTGTTTGGTC
AATGCATAGGTATGAAGGAATCAAGTGAGTTTGCTGAGGAATTATTTGATGCTCTAGCTA
GGAAGAGATGCATCACATCTCCTGCGGTGACTAAGGATGAACTGCACGAATTCTGGGAAC
AAATAACTGATACTAGCTTTGATGCCCGGCTTCAAACTTTCTTCGACATGGTGGATAAAG
ATGCAGATGGGAGAATTACTGAAGAAGAGGTGAAAGAGATCATCAGTCTTAGTGCTTCTG
CAAATAAGCTGTCAAAAATCGAGGACAATTCAGATGAATATGCAGCTCTCATCATGGAAG
AACTAGATCCAGGCAATGTTGGATACATTGAGCTGTACAACTTGGAGACTTTGCTTCTTC
AGGCCCCGAGCCACTCGATGAATCTTTCAACTAACAGCAGAGTTCTGAGTCAGATGCTAA
GTCAGAAGCTTAAGCCAACGAAAGAGCGAAATCCCTTTAAAAGATGCAAAAGAAGGCTGG
ACTATTTCATTGAGGACAATTGGAAGAGGATTTGGGTGATGGTTTTGTGGCTATCAATCT
GTGCAGGACTCTTTACATGGAAATTTATTCAATATAAACGTCGCGCTGTCTTTGATGTTA
TGGGCTATTGTGTCTCTGTAGCTAAAGGAGGTGCTGAAACAACAAAATTTAACATGGCTC
TAGTTCTTTTGCCAGTATGCAGAAACACCATAACTTGGCTAAGAAGTAGGACTAAGCTCG
GGAAAATAATTCCTTTTGATGATAACATCAATTTCCACAAGGTAATTGCATTTGGAGTAG
CAGTTGGTGTAGGCTTACATGCAATTTCACACTTAACATGTGATTTTCCCCGGCTGTTAC
ATGCCACGGATGAGGAATACGAGCCAATGAAGCCATTTTTTGGAGATGAAAGACCAAACA
ACTACTGGTGGTTTGTGAAAGGCACGGAAGGATGGACCGGTGTTGTGATGGTTGTCCTTA
TGATCATAGCGTATGTACTAGCCCAACCATGGTTTCGTAGAAACCGACTCAATCTTCCAT
CAACAATCAAGAAACTCACTGGATTTAACGCTTTTTGGTACTCCCATCACTTATTCGTTA
TAGTCTATGTCCTCTTCATCATTCACGGATACTTCCTCTACCTCTCGAAAAAATGGTACA
AGAAGACAACATGGATGTATATCGCGGTGCCTATGATACTATATGCTTGTGAACGTCTGC
TTCGTGCATTTAGGTCCGGGTACAAGGCAGTGAGGATTTTGAAGGTAGCTGTATATCCTG
GAAATGTAATGGCAGTGCACATGTCTAAGCCTCAGGGCTTTAAGTACACAAGTGGACAGT
ACATTTTTGTGAACTGTTCTGATGTTTCTTCATTTCAATGGCATCCTTTTACCATCTCCT
CAGCTCCGGGAGATGATTACCTAAGTGTGCACATTCGAACATTGGGCGATTGGACATCTC
AGCTTAAAACTCTCTTTTCTAAGGTCTGTGAGCCTCCAACTGGTGATCAAAGTGGCCTTT
TAAGAGCAGATATAGGGAAAGCTGACTATAAGCCTAGATTGCCAAAACTATTGATTGATG
GCCCTTATGGAGCACCAGCACAGGATTACAAGAAATACGACGTAGTCCTCTTAGTAGGCC
TTGGCATTGGAGCAACACCTTTGATAAGCATAGTAAAAGATGTGCTCAATAACATCAACC
AACAAAAGGACATTGAAGATGGTACTAAGGGTAGTAAAAAAAGTCCTTTTGCAACTAAAC
GAGCTTACTTCTATTGGGTAACACGCGAGCAAGGCTCGTTTGAGTGGTTTAAGGGTGTGA
TGGATGAGGTCTCGGAGAACGATCAAGAAGGCCTAATTGAGCTTCACAACTACTGCACCA
GCGTTTATGAAGAAGGCGATGCCCGGTCTGCACTAATCACAATGCTTCAATCAATCCACC
AAGCTAAGAGTGGCGTAGACATTGTCTCTGGGACAAGAGTCAAGACTCATTTTGCTAGAC
CAAATTGGCGCCAAGTTTTCAAACGTGTTACAATTAATCATCCTGATCAAAAAATTGGTG
TGTTTTATTGTGGCCCACAAGGTCTAGTTGGAGAACTAAGACATCTATCTCAAGATTTCT
CACACAAGACAGACACAAAGTTTGAATTTCATAAAGAAAATTTCTAAGGTTCAAAACTTA
TTTATTATATATGTAACATAAGTCTCATAGGTATTTATTTATTATTATATGTAATATTTA
TGTGTTTTCTTCAATTTTTTTTATTTTTTTTAATTTTTACTTTTGAGATGCATGCTGAGC
TTGACTCCAATTACTATGGAATGATGTTAGAAAGCAAAATACATTGTCAGCTATATAAAG
TTCTAACCTGTAAAGTTGATTACCAGAACTCAAATCTATCTGG