Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g099270.2.1
CDS Infomation

Microtubule binding protein (AHRD V3.3 *** A6YTD5_CUCME)
Sequence

ATGGTAGCAAGAACCCCACCAAAGTTGCAGAACAAGAAAATGGTGGTGCCTCCTCTAAAC
CCCATTCTTCTTAGAGAAACACTAAACAAGGTTGATAAATGTATGGCTAGATTGCAAGAG
CTTCAGTATACAGTTACAGGTGGACATAAGGTGATTTCTGGTGTAACTCTCAGTCCCCGC
AGCACCAGAGGTTATCTGAGAACTAGCCTCAGATGCAAACAAGAATCTTTGAGGATCAAG
AATGCTACTTCGCGTAAATCTCCTCCAGGAAAAATGCCAACAAGTGGAGGGGAATGGCGG
CGAATGTCATTACCAGCAATGCTTCTAGGAGAGACAGTGGCTGAAATTAAACAGGCAAGT
CAATTTGCTAGAGATATAGTGGAGGCAGTAGGTCCCAAGGGGTCTGATGACCCGAAAACT
CCACTTATACAGAGGCAAAATCAGAAGCCAAGCCCCGAAAACTCTGAGCTCCGATCACGT
AGAAAGAGAGAGAAACAGGTAACCTTGCAAACGATGAGGACAGAGTCTGATACACCATCA
AAACGACGAGCAAAATCACGAATAAACTTCAAGGTTTCTCCAGTGCAACAGAAGGAATGT
GAAAAAGAAAATTGCAAGTACATTGCAAATAGAGTTTCACCAAGGAATAGGCCATGGGTG
AAAAAGACTGTCCTTTTTCCGAACCCACTGTTCCATTCATCACCAACTTCACAGCAGCAG
AAATTATCCAAAACACAATCTCCAGTGATTGCAAGAAATCGACAATCACCCCATAAGTTC
TTGGTGAAGTCCCCACCCAAGGCCCCAAAGCTTCAAATGAAAATCAGAAGCCCCCAAAAA
CTTCATGCATCTCCTACCAGAGTGACAAGTTTGGGTACTAAGTTCTCGACAAAGTCTCCA
CCCAAAGCCTCAAAGTTTCAAGTGAAAATCAGGAGCCCCCCACAACTTTCTGTGTCTCCT
ACCAGAGTAACAAGTTTGGGCTCTAAGTCTTTGGCGAAGTCTCCACCAAAGTTTCAAGTG
AAAATCAGGAACCCCCCACAACTTTCTGTGTCTCCTACCAGAGTAACAAGTTCGGGCACT
AAGTCTTTGGCGAAGTCTCCACCAAAGTTTCAAGTGAAAATCAGGAGCCCTCCACAAATT
TCTGTCTCTCCTACTAGAGCAACAAGTTTGAACAAGAGGTCCCCAAAGATGTCTGCAGCT
GCCAAACTGAGAAGATCATTTTCTCCATCAAGATTGGCAAACAAGATAGCTTCTTCACCA
TCCAAGATGAGGTCATTTTCACCATCAAGATTGGCAAACAAGATAGCTTCTTCACCCTCC
AAAATGAGGTCATTTTCACCATCAAGATTGGTAAGTAGGTTAGCTTCACCACTAAAGAGC
AAAAAATCTGTACAGAAGATTGATGGGATGAAAATGATGATGAGTGGACTCAAACAGCGA
CCACGAGCTTCAACCACATCAAAGCAATTCTCAGTTCAGGGAATGTAA

Peptide Sequence

PEP ID

Solyc01g099270.2.1
PEP Infomation

Microtubule binding protein (AHRD V3.3 *** A6YTD5_CUCME)
Sequence

MVARTPPKLQNKKMVVPPLNPILLRETLNKVDKCMARLQELQYTVTGGHKVISGVTLSPR
STRGYLRTSLRCKQESLRIKNATSRKSPPGKMPTSGGEWRRMSLPAMLLGETVAEIKQAS
QFARDIVEAVGPKGSDDPKTPLIQRQNQKPSPENSELRSRRKREKQVTLQTMRTESDTPS
KRRAKSRINFKVSPVQQKECEKENCKYIANRVSPRNRPWVKKTVLFPNPLFHSSPTSQQQ
KLSKTQSPVIARNRQSPHKFLVKSPPKAPKLQMKIRSPQKLHASPTRVTSLGTKFSTKSP
PKASKFQVKIRSPPQLSVSPTRVTSLGSKSLAKSPPKFQVKIRNPPQLSVSPTRVTSSGT
KSLAKSPPKFQVKIRSPPQISVSPTRATSLNKRSPKMSAAAKLRRSFSPSRLANKIASSP
SKMRSFSPSRLANKIASSPSKMRSFSPSRLVSRLASPLKSKKSVQKIDGMKMMMSGLKQR
PRASTTSKQFSVQGM*

Transcript Sequence

Transcript ID

Solyc01g099270.2.1
Transcript Infomation

Microtubule binding protein (AHRD V3.3 *** A6YTD5_CUCME)
Sequence

TTTTGGGGAGCGTAGAGAAGAGAAGACCCACACTTTGATTTTCTAACTGTTGGGTTAACA
AAGTGAAAGAAAATGGTAGCAAGAACCCCACCAAAGTTGCAGAACAAGAAAATGGTGGTG
CCTCCTCTAAACCCCATTCTTCTTAGAGAAACACTAAACAAGGTTGATAAATGTATGGCT
AGATTGCAAGAGCTTCAGTATACAGTTACAGGTGGACATAAGGTGATTTCTGGTGTAACT
CTCAGTCCCCGCAGCACCAGAGGTTATCTGAGAACTAGCCTCAGATGCAAACAAGAATCT
TTGAGGATCAAGAATGCTACTTCGCGTAAATCTCCTCCAGGAAAAATGCCAACAAGTGGA
GGGGAATGGCGGCGAATGTCATTACCAGCAATGCTTCTAGGAGAGACAGTGGCTGAAATT
AAACAGGCAAGTCAATTTGCTAGAGATATAGTGGAGGCAGTAGGTCCCAAGGGGTCTGAT
GACCCGAAAACTCCACTTATACAGAGGCAAAATCAGAAGCCAAGCCCCGAAAACTCTGAG
CTCCGATCACGTAGAAAGAGAGAGAAACAGGTAACCTTGCAAACGATGAGGACAGAGTCT
GATACACCATCAAAACGACGAGCAAAATCACGAATAAACTTCAAGGTTTCTCCAGTGCAA
CAGAAGGAATGTGAAAAAGAAAATTGCAAGTACATTGCAAATAGAGTTTCACCAAGGAAT
AGGCCATGGGTGAAAAAGACTGTCCTTTTTCCGAACCCACTGTTCCATTCATCACCAACT
TCACAGCAGCAGAAATTATCCAAAACACAATCTCCAGTGATTGCAAGAAATCGACAATCA
CCCCATAAGTTCTTGGTGAAGTCCCCACCCAAGGCCCCAAAGCTTCAAATGAAAATCAGA
AGCCCCCAAAAACTTCATGCATCTCCTACCAGAGTGACAAGTTTGGGTACTAAGTTCTCG
ACAAAGTCTCCACCCAAAGCCTCAAAGTTTCAAGTGAAAATCAGGAGCCCCCCACAACTT
TCTGTGTCTCCTACCAGAGTAACAAGTTTGGGCTCTAAGTCTTTGGCGAAGTCTCCACCA
AAGTTTCAAGTGAAAATCAGGAACCCCCCACAACTTTCTGTGTCTCCTACCAGAGTAACA
AGTTCGGGCACTAAGTCTTTGGCGAAGTCTCCACCAAAGTTTCAAGTGAAAATCAGGAGC
CCTCCACAAATTTCTGTCTCTCCTACTAGAGCAACAAGTTTGAACAAGAGGTCCCCAAAG
ATGTCTGCAGCTGCCAAACTGAGAAGATCATTTTCTCCATCAAGATTGGCAAACAAGATA
GCTTCTTCACCATCCAAGATGAGGTCATTTTCACCATCAAGATTGGCAAACAAGATAGCT
TCTTCACCCTCCAAAATGAGGTCATTTTCACCATCAAGATTGGTAAGTAGGTTAGCTTCA
CCACTAAAGAGCAAAAAATCTGTACAGAAGATTGATGGGATGAAAATGATGATGAGTGGA
CTCAAACAGCGACCACGAGCTTCAACCACATCAAAGCAATTCTCAGTTCAGGGAATGTAA