Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g098920.3.1
CDS Infomation

Mitochondrial Rho GTPase (AHRD V3.3 *** K4B0S9_SOLLC)
Sequence

ATGGCAGGAGGTGGTTCAGCTGCTGGAAAGGGTGATGCCCCAACTGTTAGGATAGTGGTT
GCAGGTGATGCTAAAACTGGAAAGTCTAGCTTGATCTTGACAGCCGCCACTGATACTTAT
CCACCCAATGTCCCTCCGGTGTTGCCGCCTACAAGGCTACCTGATGATATCTATCCTGAT
AAAGTACCTGTAACTATTATTGATACGTCTTCTAGTCCTGAAAATAGAGGTAAACTTGTG
GAAGAGCTGAAGAAAGCTGATGCAGTTGTATTAACTTATGCTTGTGATAAGCCTGCAACT
CTTGATCGGCTGAGTACTTTCTGGCTTCCTGAACTCCGCAGATTGGAGGTTAGGGTTCCC
GTTGTTGTCGTGGGTTGCATGCTAGATAAGAGGGATGAACAGTACCCTGTCAGTTTGGAG
CAGGTGATGTCACCAATTATGCAACAATTTCGAGAGATCGAAACTTGTATTGAATGTTCA
GCATTTAGACATATACAGATTCCTGAGGTTTTCTACTATGCCCAAAAAGCCGTGCTTCAT
CCAACTGCTCCACTATTCGATCAGGAGGCCCAAACTTTAAAGCCTCGATGTGTCAGGGCT
TTAAAGCGAATATTTATTCTTTGTGATCTTGATAGAGATGGTGCCCTAAGTGATGCAGAG
TTGAATGATTTTCAGGTCAAATGCTTCAATGCTCCACTACAGCCTTCTGAAATAGTTGGT
GTTAAGAGAGTCGTTCAAGAAAAATTACAGGAAGGTGTCAATGAACAGGGTCTTACATTG
ACAGGTTTCCTCTTTCTTCATGCACTGTTTATTGAAAAAGGGCGTCTGGAGACAACCTGG
ACTGTCCTGCGAAAATTTGGCTACAATAACGAGATCAGGCTGAGTGAGGATCAGCTTCTT
CCCCCCATCAAGAGACATCCTGACCAGGCAAGCACCATTCATGGTGAGAAATTAATGTAC
TTGAAGAAGGTGAAGAGTGTGGAGCTGACCAATGATGCATTGGACTTCCTCAGAAGAATC
TTCTTCACATTTGACATCGATGGTGATGGTGCTCTTCGATCCAATGAGCTTGATGACTTG
TTTTCCACTGCTCCAGAGAACCCCTGGAGTAATGCTCCGTATAAGGATGCTGCTGAGAAG
GATGCCTTGGGAGGACTCTCTGTTGATGGTTTTCTTTCAGAGTGGGCATTGATGACACTT
CTTGATCCCGTTTATAGTGTCGAGAATCTTATATATATTGGATATGCTGGTGATCCTTCG
TCTGCTATTCGTGTAACTCGAAGAAGACGTTTAGATCGCAAGAAGCAGCAATCAGATAGA
AATGTCTATCAGTGTTTTGTTTTTGGGCCAAAAGAGGCTGGAAAATCAGCCATTCTGAAT
TCGTTTATTGGAAGGCCGTTCCCAGAAGAGTACCAATCAACTACAGGCGATCAATATGCA
GTAAATGTTGTCGATCTAGGGTGTAAGAACAGTTATTCTGTACATTGGCAGGGGGCTAAA
AAATCTCTTGTGCTACGAGAGATACCAGAAGATGAAGTGAAGAAGCTTCTATCTAGCAAG
GATGCTTTAGCAGATTGCGATATAGCAATTTTTGTTCATGACAGTTCTTGTGAAGCTTCT
TGGAAGAGAGCAGCAGATTTACTGGTGGATGTTGCCAGCCACGGAGAAGCCACTGGGTAT
GAGATGCCTTGTCTCATTGTAGCAGCTAAAGATGATCTGGAGCCGTATTTGACTGAAATT
CAAGATTCTACCAGGGTTAGCCAGGATTTAGGGATAGAAGCTCCTATACCCATCAGCACG
AAGCTTGGGGATTTCAGTAATTTGTTCCGAAGGATAGTTAATGCAGCGGAACATCCACAT
TTGAGCATCCCCGAGACTGAAGCGGGAAGAAGCCGTAAGCAATATCATCGGCTCGTCAAT
CGATCTCTTATGTTTGTATCAGTTGGGGCTGCTGTAGCTGTTGTGGGCCTGGCAGCTTAC
CGTGTTTATGCTGCGCGGAAGAATGCATCGAGCTGA

Peptide Sequence

PEP ID

Solyc01g098920.3.1
PEP Infomation

Mitochondrial Rho GTPase (AHRD V3.3 *** K4B0S9_SOLLC)
Sequence

MAGGGSAAGKGDAPTVRIVVAGDAKTGKSSLILTAATDTYPPNVPPVLPPTRLPDDIYPD
KVPVTIIDTSSSPENRGKLVEELKKADAVVLTYACDKPATLDRLSTFWLPELRRLEVRVP
VVVVGCMLDKRDEQYPVSLEQVMSPIMQQFREIETCIECSAFRHIQIPEVFYYAQKAVLH
PTAPLFDQEAQTLKPRCVRALKRIFILCDLDRDGALSDAELNDFQVKCFNAPLQPSEIVG
VKRVVQEKLQEGVNEQGLTLTGFLFLHALFIEKGRLETTWTVLRKFGYNNEIRLSEDQLL
PPIKRHPDQASTIHGEKLMYLKKVKSVELTNDALDFLRRIFFTFDIDGDGALRSNELDDL
FSTAPENPWSNAPYKDAAEKDALGGLSVDGFLSEWALMTLLDPVYSVENLIYIGYAGDPS
SAIRVTRRRRLDRKKQQSDRNVYQCFVFGPKEAGKSAILNSFIGRPFPEEYQSTTGDQYA
VNVVDLGCKNSYSVHWQGAKKSLVLREIPEDEVKKLLSSKDALADCDIAIFVHDSSCEAS
WKRAADLLVDVASHGEATGYEMPCLIVAAKDDLEPYLTEIQDSTRVSQDLGIEAPIPIST
KLGDFSNLFRRIVNAAEHPHLSIPETEAGRSRKQYHRLVNRSLMFVSVGAAVAVVGLAAY
RVYAARKNASS*

Transcript Sequence

Transcript ID

Solyc01g098920.3.1
Transcript Infomation

Mitochondrial Rho GTPase (AHRD V3.3 *** K4B0S9_SOLLC)
Sequence

GTACCCAAACAGCTATTCGAACCTATTAGCATGGCCGCCCTGTTGGGACATTTCTAGTAA
AAAAATAAAAATAAAAATGTATAGTAACATTTCTCAAACCCTTCATCGACACCCAAAAAC
CCTTTTAAGCCTAGAAAAAAATATCCCTATACGCCTTCAAATTCTTGTCAAAAATCTTTT
TCTCCAAGCTTCCTCTTCCAGCAGCCTATTTTAACATCCCCTCGGCCCCTCAAGAATTTT
CAAATCTCACGCTAAAGGTATATTTCTTGGTACCCAGATACTTATATTCTTTCTCTGGGG
TTTAGAGATTTAGCATTTGAAATCCATACCTCTATCTCGTTTGATTTCTTCATAGACTCG
GTTGGGATATTGATTCTTAAATACTTGTAGAAGGAGAGAAAGATTAGTGAGTGAATGGCA
GGAGGTGGTTCAGCTGCTGGAAAGGGTGATGCCCCAACTGTTAGGATAGTGGTTGCAGGT
GATGCTAAAACTGGAAAGTCTAGCTTGATCTTGACAGCCGCCACTGATACTTATCCACCC
AATGTCCCTCCGGTGTTGCCGCCTACAAGGCTACCTGATGATATCTATCCTGATAAAGTA
CCTGTAACTATTATTGATACGTCTTCTAGTCCTGAAAATAGAGGTAAACTTGTGGAAGAG
CTGAAGAAAGCTGATGCAGTTGTATTAACTTATGCTTGTGATAAGCCTGCAACTCTTGAT
CGGCTGAGTACTTTCTGGCTTCCTGAACTCCGCAGATTGGAGGTTAGGGTTCCCGTTGTT
GTCGTGGGTTGCATGCTAGATAAGAGGGATGAACAGTACCCTGTCAGTTTGGAGCAGGTG
ATGTCACCAATTATGCAACAATTTCGAGAGATCGAAACTTGTATTGAATGTTCAGCATTT
AGACATATACAGATTCCTGAGGTTTTCTACTATGCCCAAAAAGCCGTGCTTCATCCAACT
GCTCCACTATTCGATCAGGAGGCCCAAACTTTAAAGCCTCGATGTGTCAGGGCTTTAAAG
CGAATATTTATTCTTTGTGATCTTGATAGAGATGGTGCCCTAAGTGATGCAGAGTTGAAT
GATTTTCAGGTCAAATGCTTCAATGCTCCACTACAGCCTTCTGAAATAGTTGGTGTTAAG
AGAGTCGTTCAAGAAAAATTACAGGAAGGTGTCAATGAACAGGGTCTTACATTGACAGGT
TTCCTCTTTCTTCATGCACTGTTTATTGAAAAAGGGCGTCTGGAGACAACCTGGACTGTC
CTGCGAAAATTTGGCTACAATAACGAGATCAGGCTGAGTGAGGATCAGCTTCTTCCCCCC
ATCAAGAGACATCCTGACCAGGCAAGCACCATTCATGGTGAGAAATTAATGTACTTGAAG
AAGGTGAAGAGTGTGGAGCTGACCAATGATGCATTGGACTTCCTCAGAAGAATCTTCTTC
ACATTTGACATCGATGGTGATGGTGCTCTTCGATCCAATGAGCTTGATGACTTGTTTTCC
ACTGCTCCAGAGAACCCCTGGAGTAATGCTCCGTATAAGGATGCTGCTGAGAAGGATGCC
TTGGGAGGACTCTCTGTTGATGGTTTTCTTTCAGAGTGGGCATTGATGACACTTCTTGAT
CCCGTTTATAGTGTCGAGAATCTTATATATATTGGATATGCTGGTGATCCTTCGTCTGCT
ATTCGTGTAACTCGAAGAAGACGTTTAGATCGCAAGAAGCAGCAATCAGATAGAAATGTC
TATCAGTGTTTTGTTTTTGGGCCAAAAGAGGCTGGAAAATCAGCCATTCTGAATTCGTTT
ATTGGAAGGCCGTTCCCAGAAGAGTACCAATCAACTACAGGCGATCAATATGCAGTAAAT
GTTGTCGATCTAGGGTGTAAGAACAGTTATTCTGTACATTGGCAGGGGGCTAAAAAATCT
CTTGTGCTACGAGAGATACCAGAAGATGAAGTGAAGAAGCTTCTATCTAGCAAGGATGCT
TTAGCAGATTGCGATATAGCAATTTTTGTTCATGACAGTTCTTGTGAAGCTTCTTGGAAG
AGAGCAGCAGATTTACTGGTGGATGTTGCCAGCCACGGAGAAGCCACTGGGTATGAGATG
CCTTGTCTCATTGTAGCAGCTAAAGATGATCTGGAGCCGTATTTGACTGAAATTCAAGAT
TCTACCAGGGTTAGCCAGGATTTAGGGATAGAAGCTCCTATACCCATCAGCACGAAGCTT
GGGGATTTCAGTAATTTGTTCCGAAGGATAGTTAATGCAGCGGAACATCCACATTTGAGC
ATCCCCGAGACTGAAGCGGGAAGAAGCCGTAAGCAATATCATCGGCTCGTCAATCGATCT
CTTATGTTTGTATCAGTTGGGGCTGCTGTAGCTGTTGTGGGCCTGGCAGCTTACCGTGTT
TATGCTGCGCGGAAGAATGCATCGAGCTGAGAATTGAGATTGTGTGATCATAATATGCCA
GTCATGGTTTCAAACATCAAGTTTCTGTTGCCTGATCTCTTGTGCCATGGTTTATTGCTT
GGTTTTCTGCTAGTCTGCATATCTCCGAATTCCAACATGGAGAAAAATGCAAATATTTTT
GTGGTCGCTGCTTTAGATCTGTTACATATTAGCGGCTTTTCTTTTGTAGCATCTCAGTTA
GAAAGTACTGGACGTGCCTTTTCTTTCGAAGTGGAGAAGCCCCATTGCTGGAAGGGTTGA
TTTGCTGCGAAATAAAATGTTCAAAATAAAATTTGTTTCAAGAAACTTGGAAGTAAACCT
GAAGCAACCTTTTAGGTTATATCGTATTTCAAAGGAAATTTTTATTGAATTGTTGTAGGA
CTTTGTATTTTTGAAAAGTTGTCTAGCATTTCCCATAAAGCTTGAAGAAGTAATATCATC
CGATGTCCTAATTTGCATTACTCCTTGATAGAACATCAATTAAACTGCGATATAAGCAGG
TTTCACTAATTTTATTATTTGATTCTTCAATGTCTCGTGTAGGGGAAGTTTTAGATAATC
TTGCATCGATTAATTTCCAAATTTTCTAGGTACATACATATGTTCTATGTTCGATTTGTA
AAACGAAGCATTATG