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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g098800.3.1
CDS Infomation

Cation calcium exchanger (AHRD V3.3 *** Q2HTM6_MEDTR)
Sequence

ATGGCCTTCAATTTCTCATGCTTCAACACCACTGTAATCTCACTGATTCTCATCATCACT
GTCCTCTTCTTCTTCATCGTCCTCCCGCTTCCCCAATATTCATCAAATCCAATTCACAAA
TCTCCACTAATTCCCCACAGGTTTCTTTTGAATGCCACCATTCTTGAAGAAAAATCCGAC
CATTTTGTGTGTTCGACCAGCAATTTCACTGACTCCAATGGAATCTTTAACTACTTTTCC
TTGCACTATTGTCTCTTCCAAGAAAACCCATTTCTTTCCATCCCATTTTTCGCCCTCTGT
GTATTTCTACAGTTCTACATCCTTATCAAGACTGCCCAAGATTACTTTTCTGTTGTGGTT
ACTAAGCTTTCTACGCATCTTAGGTTGTCGCCTTCTATGGGTGCAGTGACCCTTTTGGCT
TTAGGTAATGGTGCGCCTGATGTTTTTGCATCTGTGGCTGCAGTTAGGGGAGGTCAAGCC
AGAACTGGGTTTGGGGCGATTCTTTCAGCAGGGACTTTTGTCTCTGCTTTTGTGGTTGGG
TTCGTGGCGATTTACGCGGCACCTTTTGCTGTTGATCCTGCTCCATTTGTGAGGGATGTG
ATGTTTTATTTGACTGCCGCTTTGTTTCTTTTTTATGTCTACTTAAGTGCTGAGATTTTC
CTCTGGCAAGCTATTGGGTTTGTTGCGTTTTATATCTTCTTTGTTGGATTTGTATTTTGG
ATGGACTTGGGGATGGGTGGTGCCAAAGAGAAGGGGGGTAAGTTTGGAGGTGAGGTGGGT
TTGGTTAGAAGTGATGAAGTTCATATAGGGATTGTTGAGTTCGATTCTGAAAAAGGCAAA
GTTATGGGTACTCTAGAAGATGGAAATAGGCATACTACGGGTTCATCACACCTTTTTGGA
AAGGTCTCTCTAATCTGGAAACTTCCTGTCTCGATGCTCCTTAGGCTCACCATACCACAG
ACTGCACCTTCTGAATGGAATAGATTCTGTTTATCTTCCAACATTGCTCTCTGCCCCCTC
CTCCTTCTGTTTTCCTGCAAATCTTTTGTGCCATTAAATCATCCAATCTCTTTCCTTCTC
TCAGACACCCATTTGCCTCTTTGGTTCATTGTACTTTGTGCTACGTGTTCTTTGGCTGTT
GTACATTTCATTGTTGAAAAGGAGGCCCCTAAAACTGAGCAAATGCCTGCAGTTGTTATA
GCATTTGTTATGAGTGTATTTTGGATCTCCACAGTTGCTGGGGAACTTCTCAACTGTCTT
GCCGTTCTTGGAGAGCTCCTGAAACTGCCTGCTGCCTTTCTTGGTTTAACGGTGCTTGCA
TGGGGAAACTCAGTAGGTGATCTTGTTGCAGACGTGGCTGTAGCAAAGGCTGGCCAACCG
GCCATGGCCATGGCTGGATGTTTTGCTGGGCCAATGTTTAACATGCTTTTTGGGCTTGGA
ACTGCTTTGGTTATGCAGACAGCAAATGTATATCCAGAAGCTTATGAGCTTCATCTCCAC
GTGAGTATCGTGGTTGCTTTTGTTTTCTTGCTATTGAGCTTGATGGGATCTTTGCTTTTA
GTTACTTGGAATAGGTTCCGGGTGCCAAGATTCTGGGGATTTTGCCTAGTAGGACTCTAT
GTTGTATTCATGATAATAAGCCTGATCATTGCCACGTTCTCTGCCTGA

Peptide Sequence

PEP ID

Solyc01g098800.3.1
PEP Infomation

Cation calcium exchanger (AHRD V3.3 *** Q2HTM6_MEDTR)
Sequence

MAFNFSCFNTTVISLILIITVLFFFIVLPLPQYSSNPIHKSPLIPHRFLLNATILEEKSD
HFVCSTSNFTDSNGIFNYFSLHYCLFQENPFLSIPFFALCVFLQFYILIKTAQDYFSVVV
TKLSTHLRLSPSMGAVTLLALGNGAPDVFASVAAVRGGQARTGFGAILSAGTFVSAFVVG
FVAIYAAPFAVDPAPFVRDVMFYLTAALFLFYVYLSAEIFLWQAIGFVAFYIFFVGFVFW
MDLGMGGAKEKGGKFGGEVGLVRSDEVHIGIVEFDSEKGKVMGTLEDGNRHTTGSSHLFG
KVSLIWKLPVSMLLRLTIPQTAPSEWNRFCLSSNIALCPLLLLFSCKSFVPLNHPISFLL
SDTHLPLWFIVLCATCSLAVVHFIVEKEAPKTEQMPAVVIAFVMSVFWISTVAGELLNCL
AVLGELLKLPAAFLGLTVLAWGNSVGDLVADVAVAKAGQPAMAMAGCFAGPMFNMLFGLG
TALVMQTANVYPEAYELHLHVSIVVAFVFLLLSLMGSLLLVTWNRFRVPRFWGFCLVGLY
VVFMIISLIIATFSA*

Transcript Sequence

Transcript ID

Solyc01g098800.3.1
Transcript Infomation

Cation calcium exchanger (AHRD V3.3 *** Q2HTM6_MEDTR)
Sequence

ACAAAAAATTTATTTACTTAAAATTCACACATTAGTAAGGTACTATAACATTAATATACC
CCTTTTTAGAACATCTAGCTAATTTTTACTTAAATTTTTAACTATATAACACACAGATTT
AAGAACTCTGTCAAAATTTTCGTATATATTTGATCTTGACTACTTCAATTATTTTTCATA
TCATCTATTGGCATTCAAATTGCTTGTAAAATAATTTTTAAAATTTAACTTCGTATAAAT
TGAACTGTATTATTTTTATTTTTAGCTTACAGTATTTTAATCTAATCCCTAAACGGATCT
AGTGATCCCACGGGGCAGAGAAATCATACACTCCATTATTTGTAAACACGAAAACGCGTT
AAAAAGGTACAGAAAAACAAAGCGAGTGTTGAAAAAGCGCGATCTTCAACTTCAATATTC
TGGAATGGCATGGCCTTCAATTTCTCATGCTTCAACACCACTGTAATCTCACTGATTCTC
ATCATCACTGTCCTCTTCTTCTTCATCGTCCTCCCGCTTCCCCAATATTCATCAAATCCA
ATTCACAAATCTCCACTAATTCCCCACAGGTTTCTTTTGAATGCCACCATTCTTGAAGAA
AAATCCGACCATTTTGTGTGTTCGACCAGCAATTTCACTGACTCCAATGGAATCTTTAAC
TACTTTTCCTTGCACTATTGTCTCTTCCAAGAAAACCCATTTCTTTCCATCCCATTTTTC
GCCCTCTGTGTATTTCTACAGTTCTACATCCTTATCAAGACTGCCCAAGATTACTTTTCT
GTTGTGGTTACTAAGCTTTCTACGCATCTTAGGTTGTCGCCTTCTATGGGTGCAGTGACC
CTTTTGGCTTTAGGTAATGGTGCGCCTGATGTTTTTGCATCTGTGGCTGCAGTTAGGGGA
GGTCAAGCCAGAACTGGGTTTGGGGCGATTCTTTCAGCAGGGACTTTTGTCTCTGCTTTT
GTGGTTGGGTTCGTGGCGATTTACGCGGCACCTTTTGCTGTTGATCCTGCTCCATTTGTG
AGGGATGTGATGTTTTATTTGACTGCCGCTTTGTTTCTTTTTTATGTCTACTTAAGTGCT
GAGATTTTCCTCTGGCAAGCTATTGGGTTTGTTGCGTTTTATATCTTCTTTGTTGGATTT
GTATTTTGGATGGACTTGGGGATGGGTGGTGCCAAAGAGAAGGGGGGTAAGTTTGGAGGT
GAGGTGGGTTTGGTTAGAAGTGATGAAGTTCATATAGGGATTGTTGAGTTCGATTCTGAA
AAAGGCAAAGTTATGGGTACTCTAGAAGATGGAAATAGGCATACTACGGGTTCATCACAC
CTTTTTGGAAAGGTCTCTCTAATCTGGAAACTTCCTGTCTCGATGCTCCTTAGGCTCACC
ATACCACAGACTGCACCTTCTGAATGGAATAGATTCTGTTTATCTTCCAACATTGCTCTC
TGCCCCCTCCTCCTTCTGTTTTCCTGCAAATCTTTTGTGCCATTAAATCATCCAATCTCT
TTCCTTCTCTCAGACACCCATTTGCCTCTTTGGTTCATTGTACTTTGTGCTACGTGTTCT
TTGGCTGTTGTACATTTCATTGTTGAAAAGGAGGCCCCTAAAACTGAGCAAATGCCTGCA
GTTGTTATAGCATTTGTTATGAGTGTATTTTGGATCTCCACAGTTGCTGGGGAACTTCTC
AACTGTCTTGCCGTTCTTGGAGAGCTCCTGAAACTGCCTGCTGCCTTTCTTGGTTTAACG
GTGCTTGCATGGGGAAACTCAGTAGGTGATCTTGTTGCAGACGTGGCTGTAGCAAAGGCT
GGCCAACCGGCCATGGCCATGGCTGGATGTTTTGCTGGGCCAATGTTTAACATGCTTTTT
GGGCTTGGAACTGCTTTGGTTATGCAGACAGCAAATGTATATCCAGAAGCTTATGAGCTT
CATCTCCACGTGAGTATCGTGGTTGCTTTTGTTTTCTTGCTATTGAGCTTGATGGGATCT
TTGCTTTTAGTTACTTGGAATAGGTTCCGGGTGCCAAGATTCTGGGGATTTTGCCTAGTA
GGACTCTATGTTGTATTCATGATAATAAGCCTGATCATTGCCACGTTCTCTGCCTGAGTT
TTGGAGAGACAATTGATTCATCCATCACTGGTCTGGAACCATGCGGGGGCTGCTAAACTC
TTGAAGATGAAGTAGGTGGCAAGTGCGCCTTTGCCACAATATCTAGGAAATGGTTATGTT
GATAGCCTTCATTCACTTATCAGTTAAAGATCTTATTGGCTTCCATTCAAGAACATAATA
ATTCATTTTTTTTTTCAGTTCATTGTGGAGTGAGTAAAGTGAGCTGGAAAGCATAATCCA
CTGGTTGTATAGTAAATTTCTGGTCAACTAGAAGCTTCATGTAAGCCAGTACATTTTTTC
TTGTGAAATTCAACAGAATTATAGAGAAAAATGCTTAACTTCGTATTTATGCAGAACTAC
TCGAATCATACTATCATTTT