Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g098760.3.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 - A0A061F239_THECC)
Sequence	ATGATCATGGTTCATGTTGACGAATTCAATAAGGATTTTCATTTGGTTTCGTTTACTTTC GATGCGCTTGTTGATGGAAGTATCACCATTTTCTACTTTGCTAAGGAGGGACCCAACTGC AAATTCAATCCAGTATATCCTGAAATCAAGCCTGTTCAAATACCATTTGTAAAAGGACTG GGCCAAAAGTTTTCCCAGCCTTCTGGAACTGGAATTGACCTGGGATTTTTTGATGTCAAT GACCTATCAAAGCCTCTCCAAGGAGAAGAAATTTTCCCCCTTGTTATATCAGCTGAGTCA TCTCTGTCATCAACACCACTGGATGAGAAGTATGTTGGGCAGTCACTGGAAAACTCTGCC CATTCACAGATAACTGAAGCCGTGCTAGTCAAGAATAATGAGGATCATTTTCAAGTGAAA GTGATCAAGCAGATTTTGTGGATTGAAGGAGTTCGCTATGAGCTTAGAGAGATTTATGGG ATCAACAATTCAGAGGAAACTAATGTCAATGATGAGGAGTCAGGAAAAGAATGTGTAATT TGCATGACTGAGCCGAAAGACACAGCAGTTTTGCCATGTAGACATATGTGTTTGTGTGGT GAGTGTGCCAAAGAACTGAGGCATCAATCAAATAAGTGCCCCATATGCCGCCAACCCATT GAGGAACTTCTGGAGATTAAGCGGCATCATAAGCTGGGATACGGTGACAGTCGAAGTTTG ATGGTGATAGAAAACCTAATCCAAAAGGATTGGCGTGAAGTAGGAACTGGCAACAGTGAG GCAGACAGGGAGTCTGCATCTGCTGACAGAATGAATAAACAAGAAATGCTCAAGTCTCAG ACTTGTGTACTTAAAGTGAACATACACTGTGATGGCTGTAAACAGAAGGTGAAAAAGAAA TTGCAGAAGATTGAAGGTGTTTACACAGTGAAGATAGATTCAGACCAAAGCAAAGTAACA GTGACAGGAAATGTTGATCCAGCAACGCTGATAAAGAAGCTAGTGAAATCAGGGAAACAT GCAGAGCTATGGGGAGGAGGACAAAAGGGAGGTTCTAATTTCAATATGATGAACAATCAG TTCATGAACATGCAAATGGACAACTTTAAAGGTGGAAAAGACAACAAATCTCAAAAGGGT GGTGGTGGTGGTGGAAATAAGGAGCCGCCAAAGGGGAATGCGCAACAGTTTCTTCAGATG ATGCAGAATCTCAAAGGGTCGAAGGATAATTTCAAGATGCCTAATATTCCAAATCCCAAG GATCAAAAATCTGTGAAGTTCAATCTGCCTGAGGATGAATTTGATGATGAATCTGACGAC TTCGATGATGAATCTGATGATTATGATGATGAATCTGATGAAGAATTTGGTGCCCCTCCA CCTTCTAAAATGATGGGGGGTGGATCTCATGGGCTTAATGCTATGATGATGAAAGGTGGG CCTATGGGTAATAATGGTGGAAATGGCAAGAAAGGTGGAGTTGAAATCCCAGTACAAATG AAGGGTATGGCTGGAAATCATCATGGTGGCGGCAAAAACAATAATAATGGAGGAGGAAAA CAGGGGAAAGGAGGGAACCAGAATCAGAATGTTGGTAAAAATGGTGGTAAAGGTAACAAT AATGGAAGTTTTGGTGGTGCAGCAGTACCTCAGAAAGGAGGAGGGGGAGGGAAGATGGAT GGAGGTCTAATGATGAACAGTCTGCAACAAGGAGGGCCACATGGTATGATGAGTATGGGT CAAAAAAGTGGAGGAGGTCCAATGACCATGGGCCCAATGGGTCATATGTCGGCAGCTCAA GGACTACCCGCCGGTGGTCCTGGCGGTTACCCGGGGATGGGTCAAGGAGGCAACAACCCT TATAGCCAACAACAACAACAGTATATGGCACAAATGATGATGAACCAACAGCGGCCTGCC GGATATGACATGTACGGAGCCCATCCAAACATGTACGGTGCCCATCCGATGATGTACGCC CGGCAACATCCATCCGTGAGTTACGGGCCACCGCCACCTATGGGTGCTCCGGTGCATGAT AATTTTACTCATATGTTCAGCGATGAGAATACAGGCAGCTGTAGTATTATGTAA

Peptide Sequence

PEP ID	Solyc01g098760.3.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 - A0A061F239_THECC)
Sequence	MIMVHVDEFNKDFHLVSFTFDALVDGSITIFYFAKEGPNCKFNPVYPEIKPVQIPFVKGL GQKFSQPSGTGIDLGFFDVNDLSKPLQGEEIFPLVISAESSLSSTPLDEKYVGQSLENSA HSQITEAVLVKNNEDHFQVKVIKQILWIEGVRYELREIYGINNSEETNVNDEESGKECVI CMTEPKDTAVLPCRHMCLCGECAKELRHQSNKCPICRQPIEELLEIKRHHKLGYGDSRSL MVIENLIQKDWREVGTGNSEADRESASADRMNKQEMLKSQTCVLKVNIHCDGCKQKVKKK LQKIEGVYTVKIDSDQSKVTVTGNVDPATLIKKLVKSGKHAELWGGGQKGGSNFNMMNNQ FMNMQMDNFKGGKDNKSQKGGGGGGNKEPPKGNAQQFLQMMQNLKGSKDNFKMPNIPNPK DQKSVKFNLPEDEFDDESDDFDDESDDYDDESDEEFGAPPPSKMMGGGSHGLNAMMMKGG PMGNNGGNGKKGGVEIPVQMKGMAGNHHGGGKNNNNGGGKQGKGGNQNQNVGKNGGKGNN NGSFGGAAVPQKGGGGGKMDGGLMMNSLQQGGPHGMMSMGQKSGGGPMTMGPMGHMSAAQ GLPAGGPGGYPGMGQGGNNPYSQQQQQYMAQMMMNQQRPAGYDMYGAHPNMYGAHPMMYA RQHPSVSYGPPPPMGAPVHDNFTHMFSDENTGSCSIM*

Transcript Sequence

Transcript ID	Solyc01g098760.3.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 - A0A061F239_THECC)
Sequence	ATGATCATGGTTCATGTTGACGAATTCAATAAGGATTTTCATTTGGTTTCGTTTACTTTC GATGCGCTTGTTGATGGAAGTATCACCATTTTCTACTTTGCTAAGGAGGGACCCAACTGC AAATTCAATCCAGTATATCCTGAAATCAAGCCTGTTCAAATACCATTTGTAAAAGGACTG GGCCAAAAGTTTTCCCAGCCTTCTGGAACTGGAATTGACCTGGGATTTTTTGATGTCAAT GACCTATCAAAGCCTCTCCAAGGAGAAGAAATTTTCCCCCTTGTTATATCAGCTGAGTCA TCTCTGTCATCAACACCACTGGATGAGAAGTATGTTGGGCAGTCACTGGAAAACTCTGCC CATTCACAGATAACTGAAGCCGTGCTAGTCAAGAATAATGAGGATCATTTTCAAGTGAAA GTGATCAAGCAGATTTTGTGGATTGAAGGAGTTCGCTATGAGCTTAGAGAGATTTATGGG ATCAACAATTCAGAGGAAACTAATGTCAATGATGAGGAGTCAGGAAAAGAATGTGTAATT TGCATGACTGAGCCGAAAGACACAGCAGTTTTGCCATGTAGACATATGTGTTTGTGTGGT GAGTGTGCCAAAGAACTGAGGCATCAATCAAATAAGTGCCCCATATGCCGCCAACCCATT GAGGAACTTCTGGAGATTAAGCGGCATCATAAGCTGGGATACGGTGACAGTCGAAGTTTG ATGGTGATAGAAAACCTAATCCAAAAGGATTGGCGTGAAGTAGGAACTGGCAACAGTGAG GCAGACAGGGAGTCTGCATCTGCTGACAGAATGAATAAACAAGAAATGCTCAAGTCTCAG ACTTGTGTACTTAAAGTGAACATACACTGTGATGGCTGTAAACAGAAGGTGAAAAAGAAA TTGCAGAAGATTGAAGGTGTTTACACAGTGAAGATAGATTCAGACCAAAGCAAAGTAACA GTGACAGGAAATGTTGATCCAGCAACGCTGATAAAGAAGCTAGTGAAATCAGGGAAACAT GCAGAGCTATGGGGAGGAGGACAAAAGGGAGGTTCTAATTTCAATATGATGAACAATCAG TTCATGAACATGCAAATGGACAACTTTAAAGGTGGAAAAGACAACAAATCTCAAAAGGGT GGTGGTGGTGGTGGAAATAAGGAGCCGCCAAAGGGGAATGCGCAACAGTTTCTTCAGATG ATGCAGAATCTCAAAGGGTCGAAGGATAATTTCAAGATGCCTAATATTCCAAATCCCAAG GATCAAAAATCTGTGAAGTTCAATCTGCCTGAGGATGAATTTGATGATGAATCTGACGAC TTCGATGATGAATCTGATGATTATGATGATGAATCTGATGAAGAATTTGGTGCCCCTCCA CCTTCTAAAATGATGGGGGGTGGATCTCATGGGCTTAATGCTATGATGATGAAAGGTGGG CCTATGGGTAATAATGGTGGAAATGGCAAGAAAGGTGGAGTTGAAATCCCAGTACAAATG AAGGGTATGGCTGGAAATCATCATGGTGGCGGCAAAAACAATAATAATGGAGGAGGAAAA CAGGGGAAAGGAGGGAACCAGAATCAGAATGTTGGTAAAAATGGTGGTAAAGGTAACAAT AATGGAAGTTTTGGTGGTGCAGCAGTACCTCAGAAAGGAGGAGGGGGAGGGAAGATGGAT GGAGGTCTAATGATGAACAGTCTGCAACAAGGAGGGCCACATGGTATGATGAGTATGGGT CAAAAAAGTGGAGGAGGTCCAATGACCATGGGCCCAATGGGTCATATGTCGGCAGCTCAA GGACTACCCGCCGGTGGTCCTGGCGGTTACCCGGGGATGGGTCAAGGAGGCAACAACCCT TATAGCCAACAACAACAACAGTATATGGCACAAATGATGATGAACCAACAGCGGCCTGCC GGATATGACATGTACGGAGCCCATCCAAACATGTACGGTGCCCATCCGATGATGTACGCC CGGCAACATCCATCCGTGAGTTACGGGCCACCGCCACCTATGGGTGCTCCGGTGCATGAT AATTTTACTCATATGTTCAGCGATGAGAATACAGGCAGCTGTAGTATTATGTAAATTGTT CTTTTTTTTTTTTGATATAAAACGTGTGTACTTTGTCTTGGTCTTTAGCTTATTATGAAC TAATGAGAGACGACGCTTTTGTCTTCAGAAAAGCAAATTGTAAGAATTTTGCTTTTGCTG TTACTACTACTATTTAACAATTTTGTTCATCTAGTGGCTTTAATTTAAGATCCTAATCGA AGGTTTTATGAAATTGACTATGTTCAATTTTATTTGGTCCCAAAAACAGTTTTGGAAGTA ATAAAATTAAGTCATATTTCAGTCTTGG