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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g098720.3.1
CDS Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT1G72210.1)
Sequence

ATGGCTCTAGAAGCTATAACGCAACAACAACAATATCTTTATGCTTTACTCGGAACTACA
AATTGGAGTATTGATTCTGGCTCTGATTATTACAACAATAATGAATTTGTTCCGAATCAT
CAAAATGTAACAGCACCTCAAGAGTACGAGGACTACTCAAATTGGAATTTGCCAGCTCCA
TTATTAGTAGATTCCCAAAATGAATTTCATCAATGGGGTCAAAATTGTTCCTCTGTTTTA
GATCATAATTTTACAATTGTGGATCAACAGGAACAGTTGGAGTCTCCAATCGAAATGTCT
AGTAGTACAACTAGACCACGAAGAAGAAGAACAAGAACAAAGAAGAATGACGAAGAGATT
GAGAATCAACGAATTACACACATTGCTGTTGAACGAAATCGTCGAAAACAGATGAATGAC
TACCTCTCTGTTCTCCGTACTCTCATGCCTGAATCTTATGTCCAAAGGGGTGATCAAGCA
TCAATTGTTAGTGGTGCAATTAACTATGTGAAAGAGCTAGAGCAACAACTTCAATTCCTT
AGTGGTAAGAAGCATTTGACAAGTCAAAATCAAGAAGCAAATGGTGAAACTTCTCCATTT
TCTGAATTCTTTAGCATTCCACAGTACTCCACAACCATCACTGCTGCTGCTGCTGCTACT
ACTACTAGTGAAAATGTATGTTGTGAGAATGAATATTACAGGAACCAGCAGCTACCAGCA
ACAGCTGATATAGAAGTTACAATGGTGGAAAATCATGCAAATCTGAAAATCAGATCAAAA
AAGAGGCCAAGATTGCTTCCTACAATTATTTCAGGGCTTGAAAGTCTTAGGCTAACTGTT
CTTCATCTCAATGTTTCAAAAGTTGACCAGTTTGTCCTCTGTTCTCTCAGTTTGAAGGTA
GAGGAAGATTGCAAGATGAATTCAGTGGAAGACATAGCAGCTGTTGTGAATCAGATTTTA
AGTAGGATCCACGAAGAGGCTAATTAA

Peptide Sequence

PEP ID

Solyc01g098720.3.1
PEP Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT1G72210.1)
Sequence

MALEAITQQQQYLYALLGTTNWSIDSGSDYYNNNEFVPNHQNVTAPQEYEDYSNWNLPAP
LLVDSQNEFHQWGQNCSSVLDHNFTIVDQQEQLESPIEMSSSTTRPRRRRTRTKKNDEEI
ENQRITHIAVERNRRKQMNDYLSVLRTLMPESYVQRGDQASIVSGAINYVKELEQQLQFL
SGKKHLTSQNQEANGETSPFSEFFSIPQYSTTITAAAAATTTSENVCCENEYYRNQQLPA
TADIEVTMVENHANLKIRSKKRPRLLPTIISGLESLRLTVLHLNVSKVDQFVLCSLSLKV
EEDCKMNSVEDIAAVVNQILSRIHEEAN*

Transcript Sequence

Transcript ID

Solyc01g098720.3.1
Transcript Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT1G72210.1)
Sequence

CCCAAAAGAACCAAAACTCATATCGTAATATTTTTATCTAAATACTCCTTTTCCCTTTTA
GTCAATTTCAAAATAAAACTTCTCAGGCTATACTCTTAGACTTCATCGATCGATAATGGC
TCTAGAAGCTATAACGCAACAACAACAATATCTTTATGCTTTACTCGGAACTACAAATTG
GAGTATTGATTCTGGCTCTGATTATTACAACAATAATGAATTTGTTCCGAATCATCAAAA
TGTAACAGCACCTCAAGAGTACGAGGACTACTCAAATTGGAATTTGCCAGCTCCATTATT
AGTAGATTCCCAAAATGAATTTCATCAATGGGGTCAAAATTGTTCCTCTGTTTTAGATCA
TAATTTTACAATTGTGGATCAACAGGAACAGTTGGAGTCTCCAATCGAAATGTCTAGTAG
TACAACTAGACCACGAAGAAGAAGAACAAGAACAAAGAAGAATGACGAAGAGATTGAGAA
TCAACGAATTACACACATTGCTGTTGAACGAAATCGTCGAAAACAGATGAATGACTACCT
CTCTGTTCTCCGTACTCTCATGCCTGAATCTTATGTCCAAAGGGGTGATCAAGCATCAAT
TGTTAGTGGTGCAATTAACTATGTGAAAGAGCTAGAGCAACAACTTCAATTCCTTAGTGG
TAAGAAGCATTTGACAAGTCAAAATCAAGAAGCAAATGGTGAAACTTCTCCATTTTCTGA
ATTCTTTAGCATTCCACAGTACTCCACAACCATCACTGCTGCTGCTGCTGCTACTACTAC
TAGTGAAAATGTATGTTGTGAGAATGAATATTACAGGAACCAGCAGCTACCAGCAACAGC
TGATATAGAAGTTACAATGGTGGAAAATCATGCAAATCTGAAAATCAGATCAAAAAAGAG
GCCAAGATTGCTTCCTACAATTATTTCAGGGCTTGAAAGTCTTAGGCTAACTGTTCTTCA
TCTCAATGTTTCAAAAGTTGACCAGTTTGTCCTCTGTTCTCTCAGTTTGAAGGTAGAGGA
AGATTGCAAGATGAATTCAGTGGAAGACATAGCAGCTGTTGTGAATCAGATTTTAAGTAG
GATCCACGAAGAGGCTAATTAATTAGCTTGATGTGAGACTTAAATTATATTTAAGCGTCT
TAATTAATTTTCCAAGCTATATTGCTTATATTTATGTAGAATTAGGAATATTTGACAATA
AATCAGAGTTTAATTTTGAGGTCGCAAATTCTAATTGTA