Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g097810.3.1
CDS Infomation

zeta-carotene desaturase
Sequence

ATGGCTACTTCTTCAGCTTATCTTTCTTGTCCTGCAACTTCTGCTACTGGAAAGAAACAT
GTTTTCCCAAATGGGTCACCTGGATTCTTGGTTTTTGGTGGTACCCGTTTGTCCAACCGG
TTAGTGACCCGAAAGTCGGTTATTCGGGCTGATTTGGATTCTATGGTTTCTGATATGAGT
ACCAACGCTCCAAAAGGGCTATTTCCACCCGAGCCTGAACATTATCGGGGGCCAAAGCTG
AAAGTAGCTATTATTGGAGCTGGGCTTGCAGGCATGTCGACTGCTGTGGAGCTCTTGGAT
CAAGGACATGAGGTGGATATATACGAATCAAGGACTTTTATTGGTGGGAAAGTGGGTTCT
TTTGTTGATAGACGTGGGAACCACATTGAAATGGGACTGCACGTGTTCTTTGGTTGTTAT
AATAATCTGTTCCGTCTGTTGAAAAAGGTGGGTGCTGAAAAAAATCTGCTAGTGAAGGAG
CATACTCACACATTTGTAAATAAAGGGGGTGAAATAGGGGAACTTGATTTCCGCTTTCCA
GTTGGAGCACCCTTACATGGAATTAATGCATTTCTGTCTACTAATCAGTTAAAGATTTAT
GATAAAGCTAGAAATGCTGTAGCTCTTGCCCTTAGTCCAGTGGTGCGGGCTTTAGTTGAT
CCGGATGGTGCATTGCAGCAGATACGCGATCTAGATAATGTAAGCTTTTCTGAGTGGTTT
CTGTCTAAAGGTGGGACGCGTGCTAGCATCCAGAGGATGTGGGATCCTGTTGCATATGCT
CTTGGATTCATTGACTGTGATAACATGAGTGCTCGGTGTATGCTCACTATATTTGCATTA
TTTGCCACAAAAACAGAGGCTTCCCTATTACGCATGCTTAAAGGTTCTCCTGACGTTTAT
TTGAGTGGTCCAATTAAGAAGTACATCATGGACAAAGGGGGCAGGTTCCATCTGAGGTGG
GGATGCAGAGAGGTACTCTATGAGACATCCTCTGATGGAAGCATGTATGTTAGTGGGCTT
GCCATGTCAAAGGCCACTCAGAAGAAAATTGTAAAAGCTGATGCATATGTGGCTGCATGT
GATGTCCCTGGAATTAAAAGATTGGTTCCTCAGAAGTGGAGGGAATTGGAATTCTTTGAC
AACATTTACAAATTGGTCGGAGTGCCTGTTGTTACCGTACAACTACGCTACAATGGCTGG
GTTACAGAGTTGCAGGACTTGGAGCGTTCGAGGCAATTGAAGCGCGCTGCAGGATTGGAC
AATCTCCTCTATACGCCAGATGCAGATTTCTCTTGCTTTGCAGATCTTGCATTGGCATCT
CCAGATGATTACTACATTGAGGGACAAGGCTCATTGCTTCAATGTGTCCTTACACCTGGT
GACCCTTACATGCCTCTATCAAATGATGAAATCATTAAAAGAGTTACAAAGCAGGTTTTG
GCATTATTTCCTTCGTCCCAAGGTCTTGAGGTTACCTGGTCATCAGTTGTGAAGATAGGA
CAATCTTTATATCGTGAAGGACCTGGTAAAGACCCATTCAGACCTGATCAGAAGACGCCA
GTGGAAAATTTCTTTCTTGCTGGCTCATATACAAAACAGGACTACATCGATAGCATGGAA
GGAGCAACTCTTTCAGGTAGGCAAGCTTCTGCATACATATGTAATGTTGGAGAGCAGCTG
ATGGCGTTGCGTAAAAAGATCACTGCTGCTGAGTTGAATGACATCTCTAAAGGTGTGTCC
CTATCTGATGAGTTGAGTCTTGTCTGA

Peptide Sequence

PEP ID

Solyc01g097810.3.1
PEP Infomation

zeta-carotene desaturase
Sequence

MATSSAYLSCPATSATGKKHVFPNGSPGFLVFGGTRLSNRLVTRKSVIRADLDSMVSDMS
TNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGS
FVDRRGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLLVKEHTHTFVNKGGEIGELDFRFP
VGAPLHGINAFLSTNQLKIYDKARNAVALALSPVVRALVDPDGALQQIRDLDNVSFSEWF
LSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFALFATKTEASLLRMLKGSPDVY
LSGPIKKYIMDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAAC
DVPGIKRLVPQKWRELEFFDNIYKLVGVPVVTVQLRYNGWVTELQDLERSRQLKRAAGLD
NLLYTPDADFSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQVL
ALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSME
GATLSGRQASAYICNVGEQLMALRKKITAAELNDISKGVSLSDELSLV*

Transcript Sequence

Transcript ID

Solyc01g097810.3.1
Transcript Infomation

zeta-carotene desaturase
Sequence

GTTAACCCATTTTCTTGATATTTAACAAGAAAAGTTTCTTTCTTTTTTTTCCTACCCTCA
TAATTGGGTAGAGAACAATTCCCATGGCTACTTCTTCAGCTTATCTTTCTTGTCCTGCAA
CTTCTGCTACTGGAAAGAAACATGTTTTCCCAAATGGGTCACCTGGATTCTTGGTTTTTG
GTGGTACCCGTTTGTCCAACCGGTTAGTGACCCGAAAGTCGGTTATTCGGGCTGATTTGG
ATTCTATGGTTTCTGATATGAGTACCAACGCTCCAAAAGGGCTATTTCCACCCGAGCCTG
AACATTATCGGGGGCCAAAGCTGAAAGTAGCTATTATTGGAGCTGGGCTTGCAGGCATGT
CGACTGCTGTGGAGCTCTTGGATCAAGGACATGAGGTGGATATATACGAATCAAGGACTT
TTATTGGTGGGAAAGTGGGTTCTTTTGTTGATAGACGTGGGAACCACATTGAAATGGGAC
TGCACGTGTTCTTTGGTTGTTATAATAATCTGTTCCGTCTGTTGAAAAAGGTGGGTGCTG
AAAAAAATCTGCTAGTGAAGGAGCATACTCACACATTTGTAAATAAAGGGGGTGAAATAG
GGGAACTTGATTTCCGCTTTCCAGTTGGAGCACCCTTACATGGAATTAATGCATTTCTGT
CTACTAATCAGTTAAAGATTTATGATAAAGCTAGAAATGCTGTAGCTCTTGCCCTTAGTC
CAGTGGTGCGGGCTTTAGTTGATCCGGATGGTGCATTGCAGCAGATACGCGATCTAGATA
ATGTAAGCTTTTCTGAGTGGTTTCTGTCTAAAGGTGGGACGCGTGCTAGCATCCAGAGGA
TGTGGGATCCTGTTGCATATGCTCTTGGATTCATTGACTGTGATAACATGAGTGCTCGGT
GTATGCTCACTATATTTGCATTATTTGCCACAAAAACAGAGGCTTCCCTATTACGCATGC
TTAAAGGTTCTCCTGACGTTTATTTGAGTGGTCCAATTAAGAAGTACATCATGGACAAAG
GGGGCAGGTTCCATCTGAGGTGGGGATGCAGAGAGGTACTCTATGAGACATCCTCTGATG
GAAGCATGTATGTTAGTGGGCTTGCCATGTCAAAGGCCACTCAGAAGAAAATTGTAAAAG
CTGATGCATATGTGGCTGCATGTGATGTCCCTGGAATTAAAAGATTGGTTCCTCAGAAGT
GGAGGGAATTGGAATTCTTTGACAACATTTACAAATTGGTCGGAGTGCCTGTTGTTACCG
TACAACTACGCTACAATGGCTGGGTTACAGAGTTGCAGGACTTGGAGCGTTCGAGGCAAT
TGAAGCGCGCTGCAGGATTGGACAATCTCCTCTATACGCCAGATGCAGATTTCTCTTGCT
TTGCAGATCTTGCATTGGCATCTCCAGATGATTACTACATTGAGGGACAAGGCTCATTGC
TTCAATGTGTCCTTACACCTGGTGACCCTTACATGCCTCTATCAAATGATGAAATCATTA
AAAGAGTTACAAAGCAGGTTTTGGCATTATTTCCTTCGTCCCAAGGTCTTGAGGTTACCT
GGTCATCAGTTGTGAAGATAGGACAATCTTTATATCGTGAAGGACCTGGTAAAGACCCAT
TCAGACCTGATCAGAAGACGCCAGTGGAAAATTTCTTTCTTGCTGGCTCATATACAAAAC
AGGACTACATCGATAGCATGGAAGGAGCAACTCTTTCAGGTAGGCAAGCTTCTGCATACA
TATGTAATGTTGGAGAGCAGCTGATGGCGTTGCGTAAAAAGATCACTGCTGCTGAGTTGA
ATGACATCTCTAAAGGTGTGTCCCTATCTGATGAGTTGAGTCTTGTCTGATGACAGACTG
CAAATCATCCAAATACAACTCAGTTAGGCATCGCACAAGGAAGAATTCTTCTAATTTTTG
AGTCCACAAGATGGAAATCAAAAGGTTTAAGCATGTTGTATGTATGTAATTTTAGTATAT
CTTCATAGTGATGTATGTATCTATTCTGTCACAAAATCCAGATAATTGAAATGTATCTTA
TTGCTACTTCATCAATCATTGGGAAGAACTTTGTCACACATAAGCTTTTAATAATGTTAA
CCTTAAGTCAGACCAAGTTTATGGCA