Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g097770.3.1
CDS Infomation	phototropin 2
Sequence	ATGGAAAACCAGAGAAGATCAATTGATGTCTTTGACCCGGCATCGACTCATGATGGTGCA AACCTGGCTAGTAGTAGTAGAAATGAGGGTATTGATGTGCAAGAAATTTCGGTGAAAGGG GCGGAATCTGCAAGTAGGACAGGAACAGACAAGTTAATTAACAAGTGGATGGCCTTTGAT CTCAAAGGAAATGACCAGAATGACAATGCAGATAGTCAGATCCCAGGTGAAACCAGCATA TCAGAGAGGGCTGCAGAGTGGGGATTAACTGTGAGGACAGATGTTGGAGAAGGTAGCTTT CATGCAATTAGCAGAAGTGGACAAAATTCATTTGCAGATGGAGAAAGAAGCAAGAATTCA TTAGAGAAGAATTCAGTTGGATCAACAAGGACATCCGAGGAGTCGAATCTTGGAGCTGAA TTTCCGAGAGTTTCTCAGGATCTGAAGGATGCCTTAGCGACACTGCAACAGACATTTGTC GTATCTGATGCCACAAAACCAGATTGCCCTATTGTTTATGCCAGTAGTGGCTTCTTTACT ATGACTGGTTATTCTTCGAAAGAGATTGTTGGAAGGAATTGTCGCTTTCTACAGGGGAAA GATACAGACCAGAATGAAGTAGCAAAAATCCGAGATGCTGTGAAAACAGGGAAAAGCTAC TGTGGGAGGCTCTTAAACTACAAGAAGAATGGTACCCCTTTTTGGAACCTGTTAACTGTC ACCCCTATAAAAGATGACAGCGGAAAGACGATAAAGTTTATAGGAATGCAGGTTGAAGTC AGCAAATACACAGAAGGTGTTAATGAGAAAGAATTGCGACCAAATGGTTTGCCCAAGTCT TTAATTAGATATGATGCTCGTCAGAAGGAAAAGGCTTTAGGTTCCATTACAGAAGTGGTA CAAACCGTGAAGGGTCCACGCTCTCATATAAAGTCTAGTCAGGACGCTAGTTCTGGAACT GATAAAGAGAAGCCACAAGTAGATTTTATGCTTCCTAAAGCGGCTGATACTGAAAGCAAT ATAAGTACACCTGGACGATATACACCTCAGTGGGACGCAAGGGGTGATGTGTCTCAGGAG TTGGGTAAAAAGTCCAGAAAATCTTCACGGCTTTCCTTAAAGGGGTCTAAAGGAAGGCCC TCAAGCATCTCTTTTCCGCTAGAAAATGAAGAGAATGTTGGACCTGAAATAATAATGACA GAAGTAGAACGTACTGACAGTTGGGAGCGTGCTGAAAGAGAAAGGGACATACGTCAAGGA ATTGACCTCGCAACAACTTTGGAGCGTATTGAAAAGAATTTTGTGATTACAGATCCCAGA CTTCCTGATAATCCAATTATATTTGCTTCAGATAGCTTTCTTGAACTGACGGAATTCACA CGTGAAGAGATCTTAGGAAGAAACTGCCGATTTCTTCAGGGACCTGAAACAGATCAAGCA ACAGTTCAAAAGATCCGAGATGCCATAAAAGAACAAAAAGAAATTACTGTGCAATTAATT AATTATACAAAGAGCGGGAAGAAGTTCTGGAATTTATTTCACTTGCAACCTATGCGTGAT CAGAAGGGAGAACTACAATATTTCATTGGCGTTCAGTTAGATGGAAGTGATCATGTGGAA CCACTAAGAAACCGCCTCTCAGAACAAACTGAAAAACAAAGTGCTAAGTTGGTCAAAGCC ACTGCAACAAATGTAGATGAAGCAGTTCGAGAACTTCCTGATGCCAACTCGAGACCTGAA GACTTGTGGGCTTTACATTCTCTACCTGTCTATCCACGGCCTCATAAGAGACACAGTGCT TTATGGACCGCAATACATAAGGTCACTGCAAATGGTGAAAGATTAGGGCTCAATAACTTT AAACCAGTTCGACCTTTGGGTTGTGGAGATACTGGAAGTGTCCATTTGGTGGAACTGAAA GGTACAGGAGATCTTTTTGCTATGAAGGCGATGGACAAATCCATAATGCTCAACCGTAAT AAGGTACATCGAGCATGTGTTGAAAGGGAAGTCATAGCTCTTTTAGATCATCCTCTCCTT CCAACACTATATTCATCATTCCAGACAGAAACACATGTTTGCCTAATAACAGACTTCTGT CCTGGAGGAGAATTATTTGCTTTGCTTGACAGACAGCCTATGAAAATATTTAAAGAGGAA TCCGCAAGGTTTTATGCAGCAGAGGTCCTAATTGGCTTGGAGTATCTCCATTGTTTGGGA ATAATATACCGGGATCTGAAACCAGAAAATATCCTACTTCAGGCTGATGGGCATGTCGTA CTAACAGACTTTGATCTTTCTTTCAAGACATCTTGTAAACCTCAAGTTATAAAACATCCT CCCTCAAAGAGAAGGTCTAGGAGTACTCCACCACCAACATTTGTTGCAGAACCAGTTTCG CAGTCAAACTCATTTGTTGGTACTGAAGAATACATAGCACCGGAAATCATCACAGGAGCT GGCCACAGTAGTGCGATCGATTGGTGGGCTTTAGGAATCTTGCTTTATGAGATGCTCTAT GGGCGTACACCATTTAGAGGAAAGAACAGGCAGAAGACATTTTCCAACATCCTAAACAAG GACCTCACTTTCCCTAGTAGCATTCCGGTAAGCCTTGCAGCTAGACAGGTGATACATTCG TTGCTAAATAGAGATCCTGCTAGCCGTTTAGGATCAAATGGTGGTGCAAGTGAGATCAAA GAGCATCCTTTCTTCCGTGGAATAGCTTGGCCTCTAATACGGTGCATGTCGAACTCCACC ACCACTAGATGCACCGCTTCAGTTAATTGGAAAGGAATCAGGCAACAAGGAAATTGA

Peptide Sequence

PEP ID	Solyc01g097770.3.1
PEP Infomation	phototropin 2
Sequence	MENQRRSIDVFDPASTHDGANLASSSRNEGIDVQEISVKGAESASRTGTDKLINKWMAFD LKGNDQNDNADSQIPGETSISERAAEWGLTVRTDVGEGSFHAISRSGQNSFADGERSKNS LEKNSVGSTRTSEESNLGAEFPRVSQDLKDALATLQQTFVVSDATKPDCPIVYASSGFFT MTGYSSKEIVGRNCRFLQGKDTDQNEVAKIRDAVKTGKSYCGRLLNYKKNGTPFWNLLTV TPIKDDSGKTIKFIGMQVEVSKYTEGVNEKELRPNGLPKSLIRYDARQKEKALGSITEVV QTVKGPRSHIKSSQDASSGTDKEKPQVDFMLPKAADTESNISTPGRYTPQWDARGDVSQE LGKKSRKSSRLSLKGSKGRPSSISFPLENEENVGPEIIMTEVERTDSWERAERERDIRQG IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEFTREEILGRNCRFLQGPETDQA TVQKIRDAIKEQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVE PLRNRLSEQTEKQSAKLVKATATNVDEAVRELPDANSRPEDLWALHSLPVYPRPHKRHSA LWTAIHKVTANGERLGLNNFKPVRPLGCGDTGSVHLVELKGTGDLFAMKAMDKSIMLNRN KVHRACVEREVIALLDHPLLPTLYSSFQTETHVCLITDFCPGGELFALLDRQPMKIFKEE SARFYAAEVLIGLEYLHCLGIIYRDLKPENILLQADGHVVLTDFDLSFKTSCKPQVIKHP PSKRRSRSTPPPTFVAEPVSQSNSFVGTEEYIAPEIITGAGHSSAIDWWALGILLYEMLY GRTPFRGKNRQKTFSNILNKDLTFPSSIPVSLAARQVIHSLLNRDPASRLGSNGGASEIK EHPFFRGIAWPLIRCMSNSTTTRCTASVNWKGIRQQGN*

Transcript Sequence

Transcript ID	Solyc01g097770.3.1
Transcript Infomation	phototropin 2
Sequence	GAAAAAAAAGCAGGAGAGGGGAATTCAAAGTAGAAAGTGGGTAGGGATTTTAACTGCAGG AGAGAGAGAGAGAGAGCGCCAGAAGTAGTTATAAACTAGGTGTCTCAAAGACTCTTAATT TTGAGTAAATAAATAGTTTGCTAGAAATAGCGGTCACAGTTCTGCAACATGGCCAGTATC TATTATTTCTGGTTCTTACTCTCTTCCCTGTCACTTTTACAATAACACATAGCTAACTTA TTCTCCACAATTTCTCTGATAATTTTTCTGAAATGTATTCTCTTTCACTCTAGCCTCATC ACATTGCAGGTTGTGTTTGAGTACTTTCTGTGCTTTGAGGAGCAGAAATGGAAAACCAGA GAAGATCAATTGATGTCTTTGACCCGGCATCGACTCATGATGGTGCAAACCTGGCTAGTA GTAGTAGAAATGAGGGTATTGATGTGCAAGAAATTTCGGTGAAAGGGGCGGAATCTGCAA GTAGGACAGGAACAGACAAGTTAATTAACAAGTGGATGGCCTTTGATCTCAAAGGAAATG ACCAGAATGACAATGCAGATAGTCAGATCCCAGGTGAAACCAGCATATCAGAGAGGGCTG CAGAGTGGGGATTAACTGTGAGGACAGATGTTGGAGAAGGTAGCTTTCATGCAATTAGCA GAAGTGGACAAAATTCATTTGCAGATGGAGAAAGAAGCAAGAATTCATTAGAGAAGAATT CAGTTGGATCAACAAGGACATCCGAGGAGTCGAATCTTGGAGCTGAATTTCCGAGAGTTT CTCAGGATCTGAAGGATGCCTTAGCGACACTGCAACAGACATTTGTCGTATCTGATGCCA CAAAACCAGATTGCCCTATTGTTTATGCCAGTAGTGGCTTCTTTACTATGACTGGTTATT CTTCGAAAGAGATTGTTGGAAGGAATTGTCGCTTTCTACAGGGGAAAGATACAGACCAGA ATGAAGTAGCAAAAATCCGAGATGCTGTGAAAACAGGGAAAAGCTACTGTGGGAGGCTCT TAAACTACAAGAAGAATGGTACCCCTTTTTGGAACCTGTTAACTGTCACCCCTATAAAAG ATGACAGCGGAAAGACGATAAAGTTTATAGGAATGCAGGTTGAAGTCAGCAAATACACAG AAGGTGTTAATGAGAAAGAATTGCGACCAAATGGTTTGCCCAAGTCTTTAATTAGATATG ATGCTCGTCAGAAGGAAAAGGCTTTAGGTTCCATTACAGAAGTGGTACAAACCGTGAAGG GTCCACGCTCTCATATAAAGTCTAGTCAGGACGCTAGTTCTGGAACTGATAAAGAGAAGC CACAAGTAGATTTTATGCTTCCTAAAGCGGCTGATACTGAAAGCAATATAAGTACACCTG GACGATATACACCTCAGTGGGACGCAAGGGGTGATGTGTCTCAGGAGTTGGGTAAAAAGT CCAGAAAATCTTCACGGCTTTCCTTAAAGGGGTCTAAAGGAAGGCCCTCAAGCATCTCTT TTCCGCTAGAAAATGAAGAGAATGTTGGACCTGAAATAATAATGACAGAAGTAGAACGTA CTGACAGTTGGGAGCGTGCTGAAAGAGAAAGGGACATACGTCAAGGAATTGACCTCGCAA CAACTTTGGAGCGTATTGAAAAGAATTTTGTGATTACAGATCCCAGACTTCCTGATAATC CAATTATATTTGCTTCAGATAGCTTTCTTGAACTGACGGAATTCACACGTGAAGAGATCT TAGGAAGAAACTGCCGATTTCTTCAGGGACCTGAAACAGATCAAGCAACAGTTCAAAAGA TCCGAGATGCCATAAAAGAACAAAAAGAAATTACTGTGCAATTAATTAATTATACAAAGA GCGGGAAGAAGTTCTGGAATTTATTTCACTTGCAACCTATGCGTGATCAGAAGGGAGAAC TACAATATTTCATTGGCGTTCAGTTAGATGGAAGTGATCATGTGGAACCACTAAGAAACC GCCTCTCAGAACAAACTGAAAAACAAAGTGCTAAGTTGGTCAAAGCCACTGCAACAAATG TAGATGAAGCAGTTCGAGAACTTCCTGATGCCAACTCGAGACCTGAAGACTTGTGGGCTT TACATTCTCTACCTGTCTATCCACGGCCTCATAAGAGACACAGTGCTTTATGGACCGCAA TACATAAGGTCACTGCAAATGGTGAAAGATTAGGGCTCAATAACTTTAAACCAGTTCGAC CTTTGGGTTGTGGAGATACTGGAAGTGTCCATTTGGTGGAACTGAAAGGTACAGGAGATC TTTTTGCTATGAAGGCGATGGACAAATCCATAATGCTCAACCGTAATAAGGTACATCGAG CATGTGTTGAAAGGGAAGTCATAGCTCTTTTAGATCATCCTCTCCTTCCAACACTATATT CATCATTCCAGACAGAAACACATGTTTGCCTAATAACAGACTTCTGTCCTGGAGGAGAAT TATTTGCTTTGCTTGACAGACAGCCTATGAAAATATTTAAAGAGGAATCCGCAAGGTTTT ATGCAGCAGAGGTCCTAATTGGCTTGGAGTATCTCCATTGTTTGGGAATAATATACCGGG ATCTGAAACCAGAAAATATCCTACTTCAGGCTGATGGGCATGTCGTACTAACAGACTTTG ATCTTTCTTTCAAGACATCTTGTAAACCTCAAGTTATAAAACATCCTCCCTCAAAGAGAA GGTCTAGGAGTACTCCACCACCAACATTTGTTGCAGAACCAGTTTCGCAGTCAAACTCAT TTGTTGGTACTGAAGAATACATAGCACCGGAAATCATCACAGGAGCTGGCCACAGTAGTG CGATCGATTGGTGGGCTTTAGGAATCTTGCTTTATGAGATGCTCTATGGGCGTACACCAT TTAGAGGAAAGAACAGGCAGAAGACATTTTCCAACATCCTAAACAAGGACCTCACTTTCC CTAGTAGCATTCCGGTAAGCCTTGCAGCTAGACAGGTGATACATTCGTTGCTAAATAGAG ATCCTGCTAGCCGTTTAGGATCAAATGGTGGTGCAAGTGAGATCAAAGAGCATCCTTTCT TCCGTGGAATAGCTTGGCCTCTAATACGGTGCATGTCGAACTCCACCACCACTAGATGCA CCGCTTCAGTTAATTGGAAAGGAATCAGGCAACAAGGAAATTGACTGGAATGATGACGGA GTACTCGCTCATCCAATGGACTTATTCTAGAGGACATGTATGTGGAACTAGTTATGTGCA GAGTACTAAAGGAGGGACGAATTTTCTGATGAAGAAATTTCATATTGTTGTATAGAAGCA TGTGTTTTTCTATATTTTGCTTTCTTTTTGGCTTGAAGGACCTTCTTCTTGTTTAAGTTT GGACCCAAGGAAGGCGATTTACGTACATAGAATTTGTAGAATGGTGTGAGTAATAGGAAA ATCTTCCTTCAAAAAATTGAGAATCTGTATTTGTAGGTTTTGTTGGTAATTAAATAAACT TGTCTTATACTTTTGTATCATATGATAAAGATGTATTTTGAGGCAAATCAATAAGCTGTT ATCTTGTACACTTCGTAAATTCAATATTCTAGCTCCGTCATCTCTAACATGAGAGCATGT TTAATTTATCGACTTAGTTTGTCATATAATTT