Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g096990.3.1
CDS Infomation

Vacuolar protein sorting-associated protein 9A (AHRD V3.3 *** A0A1D1ZJE0_9ARAE)
Sequence

ATGGAGAACAGCGACGTCTTAGGATCGTCTACTGCACCATTGACGTGGCATGATTTCCTT
CAGCGAATGCGTGATCCAAGCGCTGCCGAGTTCGTCAAATCCATCAAAAGTTTTATTGTA
TCATTTTTGAACAATGTTCCAGACGCAGAGAGGGATAGTGCAGCCGTGCAGGAATTCCTT
GGAAATATGGAAACAGCATTTAGAGCTCATTCACTTTGGGCTGGATGTTCTGAGGAGGAG
TTGGAGAGCGCTGGTGAAGGACTTGAGAAGTATGTCATGACGAAGCTATTTACACGTACA
TTTGCTTCACTTCCTGAAGATGTGAAAGTCGATGAACAGCTTCATGAGAAAATTGCTTTG
ATTCAACAATTTGTTAGGCCTGAGAATTTGGATATCAAGCCAACATTTCAAAATGAATCG
TCATGGTTGCTTGCACAGAAGGAGCTACAAAAGATAAATATGTACAGGGCACCAAGAGAC
AAACTTGTGTGTATTCTTAATTGTTGCAAGGTTATCAATAATATCCTGACTTCTGTTTCA
GCAAAGGATAACCCTCCAGGAGCCGATGATTTTCTTCCCGTTCTCATATATGTCACCATA
AAGGCTAACCCCCCTCAGCTGCACTCAAATCTGCTGTATATACAAAGGTTTAGGCGGCAA
ACACGCCTGGTTTCTGAAGCGGCATACTTCTTCACAAACATTCTTTCTGCAGAATCTTTC
ATTTCAAATATTGATGCACGAGCTCTTTCTATGGATGAGACCGAGTTTGAAACAAATATG
GAGTCTGCTCGAGCACTTCTTTCTGGTCTTTCAGCCGACAACAATGTACTGGACCAGAGT
GATCAGAACGCTGGACCTGTTCCTGGTGCAGACACTTCTGATGCCAAACAAAGTTTTAGG
TCAAATAGGCCTCCACACCCTGCTACGCAGCCAAATCTCTCAGTTGCATCAACAGAAACA
AACATTAAGAACGAGGATCAGTATTCTAAAAGTCAGTCATCAATGGAAAAGATCCCGTCA
CTGTCGGACTTAGAACACAGAGGGGCTAGTATGCTTATCAAGGAGGATAGCATCAGCCAA
GTGTTCCAAAGTTTCCCCTACCTATATTCCCAGGCTGGTGATCTAACAGTGGGTGATATC
GAAGAACTGCTAACCAATTACAAGCGCCTAGTTATCAAGTATATTTGCCTTGCTAAAGGA
TCAGGCATTGACAATCCATCTCCTCCATTGCCCAACAATGAAGAACAAACTCTGCCCCCT
GAGTTTGAATTCAACACCGAATCTGAAGCTGCCTCAGCAGGAGAGCCAATTGATGAGACA
CAGAAAGACGAGCCAATCGATGAGACACTGAAAGACAGGGTCGAGGATTCTTCAGTACTT
CCAAAGTCTCTCGAGTCTGATGAATTAAAGTTAAAGGAAAATGAACAACTTTCAAGTAAG
GGTGAAGAAGGGAGTTAA

Peptide Sequence

PEP ID

Solyc01g096990.3.1
PEP Infomation

Vacuolar protein sorting-associated protein 9A (AHRD V3.3 *** A0A1D1ZJE0_9ARAE)
Sequence

MENSDVLGSSTAPLTWHDFLQRMRDPSAAEFVKSIKSFIVSFLNNVPDAERDSAAVQEFL
GNMETAFRAHSLWAGCSEEELESAGEGLEKYVMTKLFTRTFASLPEDVKVDEQLHEKIAL
IQQFVRPENLDIKPTFQNESSWLLAQKELQKINMYRAPRDKLVCILNCCKVINNILTSVS
AKDNPPGADDFLPVLIYVTIKANPPQLHSNLLYIQRFRRQTRLVSEAAYFFTNILSAESF
ISNIDARALSMDETEFETNMESARALLSGLSADNNVLDQSDQNAGPVPGADTSDAKQSFR
SNRPPHPATQPNLSVASTETNIKNEDQYSKSQSSMEKIPSLSDLEHRGASMLIKEDSISQ
VFQSFPYLYSQAGDLTVGDIEELLTNYKRLVIKYICLAKGSGIDNPSPPLPNNEEQTLPP
EFEFNTESEAASAGEPIDETQKDEPIDETLKDRVEDSSVLPKSLESDELKLKENEQLSSK
GEEGS*

Transcript Sequence

Transcript ID

Solyc01g096990.3.1
Transcript Infomation

Vacuolar protein sorting-associated protein 9A (AHRD V3.3 *** A0A1D1ZJE0_9ARAE)
Sequence

AAGGCTTGCGCATTTCTTTTTTTTTCATATATATAGTTTAGATAAGATTTTCTACATTGA
CGAGCGGCTAAATACTGAATAATTTTGCGTGGTTAAAAACTTAATTAGCGATGGCTATTT
GCCACAATTTCTCTCATAAATTCAGGTGTTATGGCCCGTAAACAGGCCCAATCTATTCTC
ATAAGCCCGAAGTCCTTCCAAAGGAATTGCAAGCCCAACTTCCACTTAATTTCGGGGGCC
CATTTATTCTGTCTTCTTCTTTTTCTTCTTTCTTCTTCAGTACAGTAGTCAGAAATTCGT
AGAGAGAGAGAGTCGCCGGCCGTCGATCTGAAAATGGAGAACAGCGACGTCTTAGGATCG
TCTACTGCACCATTGACGTGGCATGATTTCCTTCAGCGAATGCGTGATCCAAGCGCTGCC
GAGTTCGTCAAATCCATCAAAAGTTTTATTGTATCATTTTTGAACAATGTTCCAGACGCA
GAGAGGGATAGTGCAGCCGTGCAGGAATTCCTTGGAAATATGGAAACAGCATTTAGAGCT
CATTCACTTTGGGCTGGATGTTCTGAGGAGGAGTTGGAGAGCGCTGGTGAAGGACTTGAG
AAGTATGTCATGACGAAGCTATTTACACGTACATTTGCTTCACTTCCTGAAGATGTGAAA
GTCGATGAACAGCTTCATGAGAAAATTGCTTTGATTCAACAATTTGTTAGGCCTGAGAAT
TTGGATATCAAGCCAACATTTCAAAATGAATCGTCATGGTTGCTTGCACAGAAGGAGCTA
CAAAAGATAAATATGTACAGGGCACCAAGAGACAAACTTGTGTGTATTCTTAATTGTTGC
AAGGTTATCAATAATATCCTGACTTCTGTTTCAGCAAAGGATAACCCTCCAGGAGCCGAT
GATTTTCTTCCCGTTCTCATATATGTCACCATAAAGGCTAACCCCCCTCAGCTGCACTCA
AATCTGCTGTATATACAAAGGTTTAGGCGGCAAACACGCCTGGTTTCTGAAGCGGCATAC
TTCTTCACAAACATTCTTTCTGCAGAATCTTTCATTTCAAATATTGATGCACGAGCTCTT
TCTATGGATGAGACCGAGTTTGAAACAAATATGGAGTCTGCTCGAGCACTTCTTTCTGGT
CTTTCAGCCGACAACAATGTACTGGACCAGAGTGATCAGAACGCTGGACCTGTTCCTGGT
GCAGACACTTCTGATGCCAAACAAAGTTTTAGGTCAAATAGGCCTCCACACCCTGCTACG
CAGCCAAATCTCTCAGTTGCATCAACAGAAACAAACATTAAGAACGAGGATCAGTATTCT
AAAAGTCAGTCATCAATGGAAAAGATCCCGTCACTGTCGGACTTAGAACACAGAGGGGCT
AGTATGCTTATCAAGGAGGATAGCATCAGCCAAGTGTTCCAAAGTTTCCCCTACCTATAT
TCCCAGGCTGGTGATCTAACAGTGGGTGATATCGAAGAACTGCTAACCAATTACAAGCGC
CTAGTTATCAAGTATATTTGCCTTGCTAAAGGATCAGGCATTGACAATCCATCTCCTCCA
TTGCCCAACAATGAAGAACAAACTCTGCCCCCTGAGTTTGAATTCAACACCGAATCTGAA
GCTGCCTCAGCAGGAGAGCCAATTGATGAGACACAGAAAGACGAGCCAATCGATGAGACA
CTGAAAGACAGGGTCGAGGATTCTTCAGTACTTCCAAAGTCTCTCGAGTCTGATGAATTA
AAGTTAAAGGAAAATGAACAACTTTCAAGTAAGGGTGAAGAAGGGAGTTAAGTTTTACAG
ATAAATTCAGTGGAAAACTCAGGTAGAAATCAATCATGTGATGTCTAAAGTTGTATCTGT
ATTTTTAACAGCAAAATGAGGATCCACTGGATTCTTCTGGACAGTAGAATAACCTGGGTA
AATCTAAGCTGCCACTTTTTTATATTTTACTTTTTATAAATAGTCACACGAACCTAAGGT
AAGATTAAAGAAGTAGTTGTTTATAATTTTACAATAATCAGCATATTAGAAGTCTATTGC
TAATAAATAATAAGGTATCATGCATTTAGACACTTCCGAAATTAAGTGAATATGAGATAT
ATCATGGAAAACATGTGGAATATTTT