Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g096840.3.1
CDS Infomation

QWRF motif protein (DUF566) (AHRD V3.3 *-* AT3G60000.2)
Sequence

ATGTCCACTGTTCAAAGAAGGCAGCAACCCGTAGATGTTCCGAAGGAAAATGGAGGTGCT
AGAGTACAGCAACAACAACACCTAGATATTATGCAGTCAAGGGGTGGGAAGATGTCCTCC
AGGCCTGACACCCCTTCAGTGACAGGTACTGCTAGGATTATCCCATCTAGATATCGGCAA
ACTCCTCAGTCTGTACTCCGTTCTAGTTCAACGAGTAATCCTGGATATGCATCGGTCAGT
GCTGCTGCTAAACTGTTGCAGGAGGTTACGGGTACTCCTATAAATCCTTGTGCAGTGTCC
TGTGGTGATGGAGCAATTGTCCATAAAAAGCTATCGAAAGTTTCAACAAGCAGTGCTGTA
GATGGCTGTGCTGCTGCTACTGAGAGCACTTCATGCCCCAATTCTCCAGTATGCACTCAG
AGAAAGCAGCAGCACATTAAAGTTCCCAAGGACAATGGAGGCACCAGAGCACATCAACAA
CAACTTGCAGATGCTTTGCAGTCAAAAGGTAGTAAGATCTCCTCAAGACTTGACACACCT
ACCGTGACTGGTGCTTCTAGGGTTGTTCCATCTAGATATAAGTTCACTCCTCAGTCTTTG
AACCGTCACTGTCCAACCAGTACTCCTGGAGGAACAATCAGTGCGGCTGACAAACTATTG
CGGGAGATTACAGCTACACCTATAAATCCTTGCTCGGTGTCGCAGGATGACGGAGCATTA
GTCTCCAGAAAGCTTTCAAAAGTTTCAACTAGTCCTTATGTGGATTCTTGTGCCACTGGT
ACTGCTACTACTAAGGGAAGTTCATGCCCGAGTTCTCCACTTTGCCCTCAAAACAATAAG
ACGCGGACATTATCAGCAATGAGGTCTTCTACGTCCGAGATTGATAGATGTCTCACGGAG
AGAAATAGAGACAGTTCAGTTGATGAATGCAGTTCATATAAATCCGCATTCTCTACTTGC
GCTCGTTCACTGCATTTGCCAACAGCCAATAACGAAAACTCCTCCTCTTGGCTATCTCTT
AAACAAAATGACATGTTTGCTTCAAGATCATCTTTCAAAATGGGGGGCCTTTGCTTGCCT
CCACATCCAACTTCCAATAAATTGGGAGCAGATGCTGCTAGGAAAGGGAGGAAGGGTTTC
AGTGATCAGGGAGAAGTGCATTCACTGAAGTTGCTCTACAACCATCACCTTCAATGGCGA
TTTGCAAATGCCAAAGCAGAGGCCTCCATGCACTCCCAAAGACATGAGAGCCAGAGCAAA
CTTTATTCCTTTGCACAACAATTATCAGATCTACGCAAATCTGTAAGCCAGAAACGTGCT
GAACTTGGGGTTTTGAGAAGGATCAAAACTTTATCCACTATTGTTGAATCACAATTACCA
TGTCTTGGTGAATGGGCTAACCTGGAAGAGGATTACTCAACTTCTCTGTCAGGTACAACT
GATGCCTTACGCAATTGCTCTCTGAGACTTCCTATTGGCACGGAAGTTCATGTCGATATA
AAAGAGTTAGGAGATGCTCTTAGTTCATCTACAAAGGTGATGGAAATGATCGGTTTGCAA
ATTCAGAACTTTATGCAAAAGGCAGAAGAAACAGAAAGTTTAGTCTCTGAACTAGCTAGG
GTGAGTGGTGGAGAGAAAGCTCTTGTTGAGGAATGTGGGGATTTATTAATGAAGACGTAT
ATCTCACAGGTGACAGAATGGAGTTTAAGGGGACAAATGATTCAAATGCATCAGAACAAC
CTTTATCAAGTTCAGAAAGAATGA

Peptide Sequence

PEP ID

Solyc01g096840.3.1
PEP Infomation

QWRF motif protein (DUF566) (AHRD V3.3 *-* AT3G60000.2)
Sequence

MSTVQRRQQPVDVPKENGGARVQQQQHLDIMQSRGGKMSSRPDTPSVTGTARIIPSRYRQ
TPQSVLRSSSTSNPGYASVSAAAKLLQEVTGTPINPCAVSCGDGAIVHKKLSKVSTSSAV
DGCAAATESTSCPNSPVCTQRKQQHIKVPKDNGGTRAHQQQLADALQSKGSKISSRLDTP
TVTGASRVVPSRYKFTPQSLNRHCPTSTPGGTISAADKLLREITATPINPCSVSQDDGAL
VSRKLSKVSTSPYVDSCATGTATTKGSSCPSSPLCPQNNKTRTLSAMRSSTSEIDRCLTE
RNRDSSVDECSSYKSAFSTCARSLHLPTANNENSSSWLSLKQNDMFASRSSFKMGGLCLP
PHPTSNKLGADAARKGRKGFSDQGEVHSLKLLYNHHLQWRFANAKAEASMHSQRHESQSK
LYSFAQQLSDLRKSVSQKRAELGVLRRIKTLSTIVESQLPCLGEWANLEEDYSTSLSGTT
DALRNCSLRLPIGTEVHVDIKELGDALSSSTKVMEMIGLQIQNFMQKAEETESLVSELAR
VSGGEKALVEECGDLLMKTYISQVTEWSLRGQMIQMHQNNLYQVQKE*

Transcript Sequence

Transcript ID

Solyc01g096840.3.1
Transcript Infomation

QWRF motif protein (DUF566) (AHRD V3.3 *-* AT3G60000.2)
Sequence

GAAGTTGTTTGTTATAAAGGCCTAAATTAAAGACCAAACAACATAGGGACAAAAAAGTGT
AAGTGACCCCTTTTTCTAGGCCCAACACTTTTGGTTCTAAACCAGGCCTATCTCAGTCAA
AGTTCCTTTTCTTATACATGGGCTGGCCCACCCCATGGACCCATGGGCTCAATCACTTAC
GCCTTATCGGTCGGATTTATCGGCAACGGCTACTTCTTTTTACTCTTCTCTTCAACGGCT
ATTTTTATTGCAGCAGTTTTATGTTTCTCTGTTACACTTCTCTCACATCATCTCTCTGTC
GTTTTTTTTTAATTTGTCAAAATCTCTCATTGACCTCGCCGGAAAAGGACGGACAGTCAG
TTACTCCAATTTCTGTCTGAATTTCTTTCATTTTGCCGGAGTTTCTTCTTCGGCGGCCAA
TTTCATTCTTCTATACACTGCAAATCAGAACTGATCAAGTTGCTTCAGTTAAACAGCAGT
AATGTCCACTGTTCAAAGAAGGCAGCAACCCGTAGATGTTCCGAAGGAAAATGGAGGTGC
TAGAGTACAGCAACAACAACACCTAGATATTATGCAGTCAAGGGGTGGGAAGATGTCCTC
CAGGCCTGACACCCCTTCAGTGACAGGTACTGCTAGGATTATCCCATCTAGATATCGGCA
AACTCCTCAGTCTGTACTCCGTTCTAGTTCAACGAGTAATCCTGGATATGCATCGGTCAG
TGCTGCTGCTAAACTGTTGCAGGAGGTTACGGGTACTCCTATAAATCCTTGTGCAGTGTC
CTGTGGTGATGGAGCAATTGTCCATAAAAAGCTATCGAAAGTTTCAACAAGCAGTGCTGT
AGATGGCTGTGCTGCTGCTACTGAGAGCACTTCATGCCCCAATTCTCCAGTATGCACTCA
GAGAAAGCAGCAGCACATTAAAGTTCCCAAGGACAATGGAGGCACCAGAGCACATCAACA
ACAACTTGCAGATGCTTTGCAGTCAAAAGGTAGTAAGATCTCCTCAAGACTTGACACACC
TACCGTGACTGGTGCTTCTAGGGTTGTTCCATCTAGATATAAGTTCACTCCTCAGTCTTT
GAACCGTCACTGTCCAACCAGTACTCCTGGAGGAACAATCAGTGCGGCTGACAAACTATT
GCGGGAGATTACAGCTACACCTATAAATCCTTGCTCGGTGTCGCAGGATGACGGAGCATT
AGTCTCCAGAAAGCTTTCAAAAGTTTCAACTAGTCCTTATGTGGATTCTTGTGCCACTGG
TACTGCTACTACTAAGGGAAGTTCATGCCCGAGTTCTCCACTTTGCCCTCAAAACAATAA
GACGCGGACATTATCAGCAATGAGGTCTTCTACGTCCGAGATTGATAGATGTCTCACGGA
GAGAAATAGAGACAGTTCAGTTGATGAATGCAGTTCATATAAATCCGCATTCTCTACTTG
CGCTCGTTCACTGCATTTGCCAACAGCCAATAACGAAAACTCCTCCTCTTGGCTATCTCT
TAAACAAAATGACATGTTTGCTTCAAGATCATCTTTCAAAATGGGGGGCCTTTGCTTGCC
TCCACATCCAACTTCCAATAAATTGGGAGCAGATGCTGCTAGGAAAGGGAGGAAGGGTTT
CAGTGATCAGGGAGAAGTGCATTCACTGAAGTTGCTCTACAACCATCACCTTCAATGGCG
ATTTGCAAATGCCAAAGCAGAGGCCTCCATGCACTCCCAAAGACATGAGAGCCAGAGCAA
ACTTTATTCCTTTGCACAACAATTATCAGATCTACGCAAATCTGTAAGCCAGAAACGTGC
TGAACTTGGGGTTTTGAGAAGGATCAAAACTTTATCCACTATTGTTGAATCACAATTACC
ATGTCTTGGTGAATGGGCTAACCTGGAAGAGGATTACTCAACTTCTCTGTCAGGTACAAC
TGATGCCTTACGCAATTGCTCTCTGAGACTTCCTATTGGCACGGAAGTTCATGTCGATAT
AAAAGAGTTAGGAGATGCTCTTAGTTCATCTACAAAGGTGATGGAAATGATCGGTTTGCA
AATTCAGAACTTTATGCAAAAGGCAGAAGAAACAGAAAGTTTAGTCTCTGAACTAGCTAG
GGTGAGTGGTGGAGAGAAAGCTCTTGTTGAGGAATGTGGGGATTTATTAATGAAGACGTA
TATCTCACAGGTGACAGAATGGAGTTTAAGGGGACAAATGATTCAAATGCATCAGAACAA
CCTTTATCAAGTTCAGAAAGAATGAAGATTCTTGTCACTGTTGTGGAAAACTAATCGCGC
TGGACTTCTCTTGTTAAGGGGGAGGGCGTTCCATCGGAATCTCATTTGCAACAGCGGGAA
TGTCATGTGCATATTTGAGATGATCTGCAATATCAATTTTTTCGATGAGTTTTGTTTGTA
TAACAACAAGTAAGAATATTTGTCAACAACATTGTAATAATAAAGTTGTGCCTTTGGGTC
TTGAACACCTCGTTGTAAATTTGCTGCAACTCACGAGGTGTTTTTTTCTCATGTATCCAT
TATTGTCTCCATGCAAAATTTGTCTACGACGTTGGGTGGTAACTAGTTATAGATTAGAAA
TGATTTGAGCAGAACCGTTGGAAATTTTTGAAAGAAAACTTGCTTACTAAACACAACAC