Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g096360.3.1
CDS Infomation

Rho GTPase activating protein 2
Sequence

ATGACTCGTCTTTTGCGATCTAAGTCGTATACTTTTGGCCGGGTTTCTGCTTCCAACTCT
TCATCAGTTCTAGACTTGTCTCCTCATTGTTCCTCTCTCTATGATTACGAACAAGTAAGT
AAAGAAGAAGAAGAAGATGAAGAAGAAGAAGGGGAAGAGGGATTTTTAAGTCTGGACCAA
AACCGACGGAGTCGGGTTTCCGGTGATGACCGGGGACGTCAGAGCCATGACAATAACCAA
TCACCAATTCTGGCGGTTTTGGTAACGGCGCTCCGGAAGTCGTTGGTCACTTGCAGTGTG
GATAGAGATGATGTAGCTAACATGGACATTGGATGGCCCACTGATGTCTGTCACGTCTCT
CATGTTACCTTTGATCGCTTCAATGGCTTCCTTGGCTTGCCTATTGAGCTCGAGCCAGAA
GTTCCCTCTAAAGTCCCTAGCGCAAGTGCAAGTGTTTTTGGAGTTTCAGTCCAGTCAATG
CAATGTTCATATGACCAAAGAGGAAACAGCGTGCCAACGATACTTCTTGAGCTGCAGAGT
CGTCTGTATACTGAAGGAGGCCTACAAGTAGAAGGAATATTCCGGATTAATGCTGAGAAT
AGTCAAGGAGAAACTGTGAGGAACCAGCTGAATAGTAAAGGTGTTATTCCATATGGCATT
GATGTTCATTGTTTGGCAGGATTGATTAAGGCATGGCTTAGGGAGCTGCCTACAGGTGTA
CTAGATTCTCTAACCCCGGAGCAGGTGATGAATTGCAACACTGAAGAAGAGTGCACCCAA
CTAGTGAACTTACTTCCTCCAACTGAAGCTGCACTGCTTGACTGGGCAATCAATTTAATG
GCAGACGTTGTGCATAATGAGCATTATAACAAGATGAATGCAAGAAATATTGCCATGGTG
TTTGCTCCTAACATGACTCAGATGGTTGATCCTTTGACTGCACTAATTCATGCAGTCCAA
GTAATGAACCTCCTTAAGACACTTGTTATAAAGACCCTTCATGAAAGAGAAGAATCACAT
GAGACATGCCAAATGCAGTCACCACGTGCTAACATTTCCAGTAGCATGGTAGATTATGTC
TCAACACAATCAAATGGAGCACTTACTAAAGAGCCAGTTCTGGATGGCTATTCTCACGAA
AAACCAACTGCTGGTGAACTCTCAAGAAGCGCTACTTTAGACAGTACAGAGTGCGAGTTA
GGGGAGCAATTCTGGAACTGTAGGAGTACTACAAGTGATGCTGGAGAAGAATGTGATTCC
GTTGTGAAGACCTCTCCAGTTGCTCACAAAAGACAAACACTAGAGAGTAGGTTTAGAGAG
GGATTTGACACTGAGGAGGTTGAGAACACAGTGTTTAGACTTAGTTTAAGGAAGGGAATG
CAAAAGCTATGCAGGCATCCTGTATTTCAACTGAGTAAGCCCGTGAAGAAGAGCAGACTT
ATCGGGATTGTAAATAGTAGGAGAGGAGGCAGAGAAGCATTGGCATGA

Peptide Sequence

PEP ID

Solyc01g096360.3.1
PEP Infomation

Rho GTPase activating protein 2
Sequence

MTRLLRSKSYTFGRVSASNSSSVLDLSPHCSSLYDYEQVSKEEEEDEEEEGEEGFLSLDQ
NRRSRVSGDDRGRQSHDNNQSPILAVLVTALRKSLVTCSVDRDDVANMDIGWPTDVCHVS
HVTFDRFNGFLGLPIELEPEVPSKVPSASASVFGVSVQSMQCSYDQRGNSVPTILLELQS
RLYTEGGLQVEGIFRINAENSQGETVRNQLNSKGVIPYGIDVHCLAGLIKAWLRELPTGV
LDSLTPEQVMNCNTEEECTQLVNLLPPTEAALLDWAINLMADVVHNEHYNKMNARNIAMV
FAPNMTQMVDPLTALIHAVQVMNLLKTLVIKTLHEREESHETCQMQSPRANISSSMVDYV
STQSNGALTKEPVLDGYSHEKPTAGELSRSATLDSTECELGEQFWNCRSTTSDAGEECDS
VVKTSPVAHKRQTLESRFREGFDTEEVENTVFRLSLRKGMQKLCRHPVFQLSKPVKKSRL
IGIVNSRRGGREALA*

Transcript Sequence

Transcript ID

Solyc01g096360.3.1
Transcript Infomation

Rho GTPase activating protein 2
Sequence

AATATTTATTTAACACAATATATATTTAATATTAATTACTCAATACAAATTATTTTTCAA
GCTTTCGAAAATTATACGTAGACTGCAAACGAGAAGATAGAGGTAGGAAAAATTGTGAAT
TCAAACAAATCGATTAATTTCATAGTAAATTTTGTATCTATATAATCAAATAAATATATA
CATATATTAACTCGTAAACAGGACGATGATGTAAATTCCTGTTATAATGAAATTTCGGAC
TAGTTATTAATTCTTCTAAGAAATAAATAATTTTGCTAGCATAGCAACAGTGCGTGTCTT
CTCCGGCAGCTTAGTACGGCGGTGACCGTCGGTTGAAAGCAAAAAGGAGTTACTATGTAG
CTGCCATTTCCAGGTCAGTTACTTCACGAGCGGAAGACACAAAGATCCAAAAAGACAGAG
CATTATAATAATGTATTGTGTCCCCAACCCCTATCGCTGTCATTACAACTATTCCTATAC
GCTCACTTTCATGTCCATTATTTTCCCCCTCCCTCACTCTATCTTCTTCTCTCATTCACA
ATCAATTTCTATTTGTCAGTTCCATCATCATAAATTCATAATGCATGTATATTATTCTCT
TTCCAATCTCCTTATTATATAGCCCTCATTGAAACCAGGAAATTATTGGTACGTAATTCC
CAATTATGACTCGTCTTTTGCGATCTAAGTCGTATACTTTTGGCCGGGTTTCTGCTTCCA
ACTCTTCATCAGTTCTAGACTTGTCTCCTCATTGTTCCTCTCTCTATGATTACGAACAAG
TAAGTAAAGAAGAAGAAGAAGATGAAGAAGAAGAAGGGGAAGAGGGATTTTTAAGTCTGG
ACCAAAACCGACGGAGTCGGGTTTCCGGTGATGACCGGGGACGTCAGAGCCATGACAATA
ACCAATCACCAATTCTGGCGGTTTTGGTAACGGCGCTCCGGAAGTCGTTGGTCACTTGCA
GTGTGGATAGAGATGATGTAGCTAACATGGACATTGGATGGCCCACTGATGTCTGTCACG
TCTCTCATGTTACCTTTGATCGCTTCAATGGCTTCCTTGGCTTGCCTATTGAGCTCGAGC
CAGAAGTTCCCTCTAAAGTCCCTAGCGCAAGTGCAAGTGTTTTTGGAGTTTCAGTCCAGT
CAATGCAATGTTCATATGACCAAAGAGGAAACAGCGTGCCAACGATACTTCTTGAGCTGC
AGAGTCGTCTGTATACTGAAGGAGGCCTACAAGTAGAAGGAATATTCCGGATTAATGCTG
AGAATAGTCAAGGAGAAACTGTGAGGAACCAGCTGAATAGTAAAGGTGTTATTCCATATG
GCATTGATGTTCATTGTTTGGCAGGATTGATTAAGGCATGGCTTAGGGAGCTGCCTACAG
GTGTACTAGATTCTCTAACCCCGGAGCAGGTGATGAATTGCAACACTGAAGAAGAGTGCA
CCCAACTAGTGAACTTACTTCCTCCAACTGAAGCTGCACTGCTTGACTGGGCAATCAATT
TAATGGCAGACGTTGTGCATAATGAGCATTATAACAAGATGAATGCAAGAAATATTGCCA
TGGTGTTTGCTCCTAACATGACTCAGATGGTTGATCCTTTGACTGCACTAATTCATGCAG
TCCAAGTAATGAACCTCCTTAAGACACTTGTTATAAAGACCCTTCATGAAAGAGAAGAAT
CACATGAGACATGCCAAATGCAGTCACCACGTGCTAACATTTCCAGTAGCATGGTAGATT
ATGTCTCAACACAATCAAATGGAGCACTTACTAAAGAGCCAGTTCTGGATGGCTATTCTC
ACGAAAAACCAACTGCTGGTGAACTCTCAAGAAGCGCTACTTTAGACAGTACAGAGTGCG
AGTTAGGGGAGCAATTCTGGAACTGTAGGAGTACTACAAGTGATGCTGGAGAAGAATGTG
ATTCCGTTGTGAAGACCTCTCCAGTTGCTCACAAAAGACAAACACTAGAGAGTAGGTTTA
GAGAGGGATTTGACACTGAGGAGGTTGAGAACACAGTGTTTAGACTTAGTTTAAGGAAGG
GAATGCAAAAGCTATGCAGGCATCCTGTATTTCAACTGAGTAAGCCCGTGAAGAAGAGCA
GACTTATCGGGATTGTAAATAGTAGGAGAGGAGGCAGAGAAGCATTGGCATGAAACAGGT
AACCTCAGGATGGGATCTTTGTTTTCACTTTGTCCTTAATATTTGCTGCAGTTTGTACTA
ATATTGGTATCACTACTGTTTGGTCCAGAATTTAGTGAGAGGATCATTTTATTCATAGAG
TGTTCCAGGTACTAACATGTAGTTTGATGAACATATTGATAGAGGTGTGCCTCAAAAGTA
TAATTTGTTGCTTCATTGTCAGCCTACTGTAGCGCCTTAACAGCACTGGAGCAGTCTAAA
AGAATGAGAAGTATGTATAATTGGTGGTGTTAGAATTAAACTTTAGAAATGTCAGCAGAA
AGCAGTGTTGTTTCCATTGAAAAAACTCAGTGTTTGGTGGATATATATATACCTGTGTGA
TTTTGATC