Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g096350.3.1
CDS Infomation

CDPK-related protein kinase (AHRD V3.3 *** A0A0B0NV52_GOSAR)
Sequence

ATGGGTCAGTGTTATGGAAAGACGGTCCCCACCGTCCGGGATGCTGACGGACCAATCACC
GATGTAATCGGTGATTCCGATCATCCGTTGCAGCAGACGCCAGTCAGCAGCAACAATTTG
CCGTCGGTCAAAAACACACCGGCTCGATCCTCGGCCAACAGTCCTTGGCCGAGTCCTTAC
CCTCATGGGGTAGTTGGTGTGACGCCCTCACCTGCTAGGTCCACGCCTAGAAGGTTCTTC
AAACGGCCGTTTCCTCCGCCGTCTCCAGCTAAGCACATAAAGGCGTCCCTTGCCAAGCGA
TTTGGCCATGCCAAGCCGCCCGCCGAGGGGCCGATTCCTGAGGATGATACACCTGAACCT
GAACAGTCCTTGGACAAGAATTTTGGTTACAACAAGAATTTCGGGGCCAAGTTTGAGTTG
GGGAAAGAGATCGGCCGTGGGCATTTTGGTCACACCTGTCATGCTGTGGGAAAGAAAGGA
GAACTTAAGGATTTGCCTGTTGCTGTCAAAATCATCTCCAAAACCAAGATGACAACTGCG
GTCTCCATCGAAGATGTGCGACGTGAAGTGAAGATTTTGAGGGCTCTATCAGGCCACAAA
CATCTCGTGAAGTTTCACGATGGTTGTGAGGATGCTAATAATGTGTACATAGCAATGGAA
TTGTGTGAAGGAGGAGAATTGCTTGACAGAATATTGTCAAGAGGTGGTAAATATTCAGAG
GATGATGCCAAACTTATTATTGTTCAAATTCTAAACGTAGTTGCATTTTGTCATCTCCAA
GGTGTTGTCCACCGTGACCTGAAGCCTGAGAATTTCCTTTTCACCTCCCGAGATGAAGAT
GCTGATATGAAGCTCATTGATTTTGGTCTTTCTGACTTTATAAGACCAGATGAGAGACTT
AACGATATTGTGGGAAGTGCATACTATGTGGCACCAGAAGTTCTCCACAGATCTTACAGT
TTGGAAGCAGACATCTGGAGTATTGGGGTGATTACCTACATTTTGTTATGTGGAAGCAGA
CCATTCTGGGCAAGGACTGAATCTGGGATTTTTCGCTCAGTATTGAGATCTGACCCCAAC
TTTGAAGACTTGCCTTGGCCATCTGTGTCTCCCGAGGCCAAGGACTTCGTAAAGAGGCTT
TTAAATAAGGACTATCGTAAGAGGATGACTGCTGCTCAAGCTTTGACGCATCCATGGTTG
CGCAGTGAAAGCCATCCTATTCCTTTGGATATATTTGTCTATAAGTTGGTGAAGTCATAT
CTGCATGCTACACCTCTCAAACGTGCAGCACTAAAGGCTCTTTCTAAAGCTTTAACGGAA
GATGAACTGGTTTACCTAAGAGCTCAATTTATGCTTCTGGAACCTAGTCAAGATGGTCGT
GTCTCGATTGAGAACTTCAGATTGGCTCTTTTAGGAAATGCTACTGAAGCTATGAGGGAG
TCGAGGGTGCATGATATTCTGAATGCGATGACAGCATTGTCCTATAAGAAGTTGGACTTT
GAAGAGTTTTGTGCTGCTGCAATCAGCACATATCAATTGGAGGCTCTCGAGGAATGGGAG
CAGATTGCAGCCGTGGCATTCCAGCATTTTGAGCAAGAGGGGAATCGGCATGTTTCCGTG
GAGGAATTGGCTAGGGAGTTGAATGTGGGTCCAACTGCTCATTCCATTCTCAGAGATTGG
ATAAGAAATGATGGAAAACTCAACATGCTTGGATATACAAAATTTTTGCATGGTGTCACT
CTTCGTAGTACACCTGTGAGACGTCATTAG

Peptide Sequence

PEP ID

Solyc01g096350.3.1
PEP Infomation

CDPK-related protein kinase (AHRD V3.3 *** A0A0B0NV52_GOSAR)
Sequence

MGQCYGKTVPTVRDADGPITDVIGDSDHPLQQTPVSSNNLPSVKNTPARSSANSPWPSPY
PHGVVGVTPSPARSTPRRFFKRPFPPPSPAKHIKASLAKRFGHAKPPAEGPIPEDDTPEP
EQSLDKNFGYNKNFGAKFELGKEIGRGHFGHTCHAVGKKGELKDLPVAVKIISKTKMTTA
VSIEDVRREVKILRALSGHKHLVKFHDGCEDANNVYIAMELCEGGELLDRILSRGGKYSE
DDAKLIIVQILNVVAFCHLQGVVHRDLKPENFLFTSRDEDADMKLIDFGLSDFIRPDERL
NDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRSVLRSDPN
FEDLPWPSVSPEAKDFVKRLLNKDYRKRMTAAQALTHPWLRSESHPIPLDIFVYKLVKSY
LHATPLKRAALKALSKALTEDELVYLRAQFMLLEPSQDGRVSIENFRLALLGNATEAMRE
SRVHDILNAMTALSYKKLDFEEFCAAAISTYQLEALEEWEQIAAVAFQHFEQEGNRHVSV
EELARELNVGPTAHSILRDWIRNDGKLNMLGYTKFLHGVTLRSTPVRRH*

Transcript Sequence

Transcript ID

Solyc01g096350.3.1
Transcript Infomation

CDPK-related protein kinase (AHRD V3.3 *** A0A0B0NV52_GOSAR)
Sequence

TATTAAATAGAGTAATTTCATTAATTTGCAAGGAAATAAAAAAATTCAAAATGGAAGAGA
GGAGTTAATCAGCTCCGAATTTCAGACAAGAAATAAAATAGAATAAAAAAAAGTAGCGTT
GAATTAGTAGGAAAATGGAAGAGGGGAAATTTGAAAAAAGGACAAAGCCGCAAGAAAGAG
CTAAATTGTGGGGCGGAAGATGATGAATGGAACAACATCTGGGCTTGTCTTTCATACAAA
TAAAATCACAGATTACGCGCATCTCTTCCAATTTGACCATTTTCAAATTCTCTTTTTTTC
TTCTTCTTCTCCATTATATATATACACACACATACACTCTCTTTTTCTGATTCTGACTCT
GACTCTGACTGCCTCCTCCTCTCCTTTTCATTCTCTTTTTTTATCGTTTTCTCGCCGCAG
ATCCTTCTCTCTTTGCCCTGTCTCTCTGTTTCTTCTTCTCGATCTGGACTCTTTAGCGCT
TTAGTCGTCTCCTCTCTTTGACTTCTATCTCTTCTTTTCGCTGGTGGGGACTCCTTCTGC
GACTACTGACTGACCTTCTTACCATGGGTCAGTGTTATGGAAAGACGGTCCCCACCGTCC
GGGATGCTGACGGACCAATCACCGATGTAATCGGTGATTCCGATCATCCGTTGCAGCAGA
CGCCAGTCAGCAGCAACAATTTGCCGTCGGTCAAAAACACACCGGCTCGATCCTCGGCCA
ACAGTCCTTGGCCGAGTCCTTACCCTCATGGGGTAGTTGGTGTGACGCCCTCACCTGCTA
GGTCCACGCCTAGAAGGTTCTTCAAACGGCCGTTTCCTCCGCCGTCTCCAGCTAAGCACA
TAAAGGCGTCCCTTGCCAAGCGATTTGGCCATGCCAAGCCGCCCGCCGAGGGGCCGATTC
CTGAGGATGATACACCTGAACCTGAACAGTCCTTGGACAAGAATTTTGGTTACAACAAGA
ATTTCGGGGCCAAGTTTGAGTTGGGGAAAGAGATCGGCCGTGGGCATTTTGGTCACACCT
GTCATGCTGTGGGAAAGAAAGGAGAACTTAAGGATTTGCCTGTTGCTGTCAAAATCATCT
CCAAAACCAAGATGACAACTGCGGTCTCCATCGAAGATGTGCGACGTGAAGTGAAGATTT
TGAGGGCTCTATCAGGCCACAAACATCTCGTGAAGTTTCACGATGGTTGTGAGGATGCTA
ATAATGTGTACATAGCAATGGAATTGTGTGAAGGAGGAGAATTGCTTGACAGAATATTGT
CAAGAGGTGGTAAATATTCAGAGGATGATGCCAAACTTATTATTGTTCAAATTCTAAACG
TAGTTGCATTTTGTCATCTCCAAGGTGTTGTCCACCGTGACCTGAAGCCTGAGAATTTCC
TTTTCACCTCCCGAGATGAAGATGCTGATATGAAGCTCATTGATTTTGGTCTTTCTGACT
TTATAAGACCAGATGAGAGACTTAACGATATTGTGGGAAGTGCATACTATGTGGCACCAG
AAGTTCTCCACAGATCTTACAGTTTGGAAGCAGACATCTGGAGTATTGGGGTGATTACCT
ACATTTTGTTATGTGGAAGCAGACCATTCTGGGCAAGGACTGAATCTGGGATTTTTCGCT
CAGTATTGAGATCTGACCCCAACTTTGAAGACTTGCCTTGGCCATCTGTGTCTCCCGAGG
CCAAGGACTTCGTAAAGAGGCTTTTAAATAAGGACTATCGTAAGAGGATGACTGCTGCTC
AAGCTTTGACGCATCCATGGTTGCGCAGTGAAAGCCATCCTATTCCTTTGGATATATTTG
TCTATAAGTTGGTGAAGTCATATCTGCATGCTACACCTCTCAAACGTGCAGCACTAAAGG
CTCTTTCTAAAGCTTTAACGGAAGATGAACTGGTTTACCTAAGAGCTCAATTTATGCTTC
TGGAACCTAGTCAAGATGGTCGTGTCTCGATTGAGAACTTCAGATTGGCTCTTTTAGGAA
ATGCTACTGAAGCTATGAGGGAGTCGAGGGTGCATGATATTCTGAATGCGATGACAGCAT
TGTCCTATAAGAAGTTGGACTTTGAAGAGTTTTGTGCTGCTGCAATCAGCACATATCAAT
TGGAGGCTCTCGAGGAATGGGAGCAGATTGCAGCCGTGGCATTCCAGCATTTTGAGCAAG
AGGGGAATCGGCATGTTTCCGTGGAGGAATTGGCTAGGGAGTTGAATGTGGGTCCAACTG
CTCATTCCATTCTCAGAGATTGGATAAGAAATGATGGAAAACTCAACATGCTTGGATATA
CAAAATTTTTGCATGGTGTCACTCTTCGTAGTACACCTGTGAGACGTCATTAGCTCCTCA
TCAAAAAAATATATATATATGAGACATCATTAGATACTCTCTTTTCAAATAGCGTTTGGC
AAGTGATAGAAATTAACTGTTGATTGAAAAATAGGTAGTGATGATATGGCAGAGATGATT
TTTTATTCTTCTTTGGCTCTTGCTTTCCTGTGTCTTTTTTTTAAAAAAAAAACAAGTTGT
ATTTTGGTGGCAGCCTCGAGTGTCAAATCATCGTGACCACACCATCATCATAGTCACTAA
ACACCTCCAACAATAAAGCGGTCACCCCTGCTAACCACTAGCACCAATATCGCCGTAACC
CACCACCACAATTAGATCACACAAAGGCTACCTCCAGCCATTACCACCACCACCAAACAC
TGTTGCCTTCAATTATGGTCTTGTCAAGTTTGTGATGTTGTCATGTCACTTGGACAATGT
AACCTAGCCTAAGTCAAGTCCCCACAATTTATATTTTAGTCCGTTTGACCATTTTGAATT
TGAATAATGAGAATTTTCTTATAATAAGATAGGGCTACGATTGTTACGACAGGTTTAAGT
TCACAATATTTTATTTATGGATT