Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g095710.3.1
CDS Infomation	RNA helicase DEAH-box3
Sequence	ATGGAGTTTAGTGCAAATATGAACCTCGATACAGACAACTGGAGCCAGAATGATCAAGAC AGCAATGCACTTATATTGCCGGACAAGAAAAAGAAGAAGAAGAAAGAAAAGGAACAGGTG TCCAAAAAGCTTAAGCCTAAGAATAATAGTATTAAGTTAAGCCAATCGCAGAAAAAAAAG TTGAAGAAACTCGAGGAAGACAAGGAGAAGGCAGTACTTTTAGCAGAAAGCATTAAGACC TTGAAGAAGCACCAGATCCAAGATGATGTTTATTCACTTATGTGGTCTTCAAGGAACTTG GGTCAGGGTGAAACTAGCCGAGAAAAACGTAGAAGAGAAATACAATTTTCTAGGGCAGGG CTAGACGTGCCACATAGGGATCGACCAGTCAAGAAGAGGACTGTTGACGACCTATCTAGT GAGGTCTTGTATGATTCTGAAGAAATGCAGCTTAGTCCAATAGTCAATGGCCACCTTTTG CAGTCCTCCATAGGAGAAGGTGGTGTTCCAAGTGATGCACCCATTACACCAGGGTCTTCT CAGGAGTTGGCTTGCCATAGCAAACTTTTAGTATGCGATAGAGATGCTTCTGTGCCAAGT AAGCAAAAAGAGGATAGAACTGCAGAATGCTTAAAGTCAGATTATCTGCAAAATCACCTT TCTGTTCATGATTGTCATAATGAGGGAAGGAGGAAATCAACGGATGGTGCCAAAGCTGTT CAAAATGCCATCCTGAGCAATAGTACCAACTCAGCTAACTGTAGTTCTGAAAGAGATTTA ACAACTCCAGTTGTGGTGCATGTTTCAAGACCAAAGGAGGTTGAAAATAACAGGAGCAAT CTGCCGATAGTCATGATGGAGCAGGAGATAATGGAAGCCATAAATGACAACACTTGTGTA ATAGTTTGTGGTGAGACTGGTTGTGGTAAGACAACCCAAGTGCCACAGTTCCTTTATGAA GCTGGCTATGGTTCAAATCATTCCAATGCTTGTGGTGGTATTATTGGTGTGACTCAACCA CGCCGTGTTGCGGTACTTGCAACTGCCAAGCGAGTGGCATTTGAGCTTGGTGTTCATCTT GGCAAAGAGGTTGGTTTTCAAGTTAGACATGACAGGAGGATAGGAGACAATTGTTCCATA AAGTTCATGACTGATGGAATTTTGCTTCGCGAACTGCAGAATGATTTTCTTTTAAGGCGT TACTCGATCTTAATCTTGGACGAGGCTCACGAGAGGAGCTTGAACACCGATATACTAATC GGTATGCTTTCACGTATAATAAGAGAGCGTCAGAAAGAATATGAGGAGCAACAGAAGAAG CTTCTTTCGGGACAAACAATAATCCCTGAAGAGAGAGTTTATCCACTGAAACTTGTGCTG ATGAGTGCTACACTTCGAGTTGAGGACTTTATATCTGGCAGAAAAATTTTCCGTGATCCT CCCCCTGTAATTGAAGTCCCTACTCGCCAATACCCAGTAACTATTCATTTCTCGAAGAGA ACTGAGATGGTGGACTATGTTGGCCAAGCATATAAAAAAATATTGTCAATTCACAAAAGA TTGCCACCTGGTGGTATACTTGTATTTGTGACAGGGCAAAGGGAAGTTGAATACTTGTGT CAAAAGCTGCGCAAAGCTTCTAAGGAGATAGTTGATAGAGCTTCAAAAGATCATAGTGAG CTATCTTTGGCATCTGAAGGGAATACTATCAGGGAGAAGGTTGACAGGGAGATAAGTGAG GCATTTGATGTTGAAAGGAGTTCTTTAAATGAGATAACTGAAAGCTTCAATTCCTATGAT GAGGATCATGGGGAATCTTATGAAGATGACTCAGATATTTCGTATGATTCAGCAGATGAT AGTGATTTGGATATTTATAGTGATGATGATGCAGGGCTGCTAAACCAGAAGTCTCCAAGC TCTGATGGTAAGTTAGATGTCTTAGGTGAGGAGGGAAGCCTAAGATCACTGAAAGCTGCT TTTGAAGCTTTGGCCGGTAAAAAAATGTCAGAGCCTGATTCCGGCGGAAAGGAACTTGTT CCTATCACTGAAGAAGGGATGACCTCAAATGAATCTGAACCTCTGTTAAGCAAGGTTAGG ATCGGGGCTAACGGGACTTGTGCTGGTCCAATGTGTGTTCTACCTCTTTATGCTATGCTT CCGGCATCCGCACAGCTTCGTGTGTTTGAAGAGGTCAAGGAAGGAGAACGCCTTGTTGTT GTTGCCACTAATGTGGCTGAAACCTCATTGACCATTCCTGGTATTAAATATGTGGTTGAT ACAGGCAGAGAAAAGGTCAAAAACTACAACTCTTCTAACGGTATGGAAGGATATGAAATA CAATTTATAAGTAAGGCTTCAGCTTCTCAGCGTGCAGGAAGGGCAGGAAGAACAGGTCCT GGGCACTGTTATCGGCTTTATTCTTCTGCAGTCTTCAATGACATGTTCTTTGACTTCTCA AATGCAGAAATATTGAAAGTACCAGTTGATGGTGTTGTCCTACTTCTGAAGTCCATGCAT ATTGATAAGGTTGCTAACTTCCCTTTCCCGACTCCTCCTGAGCCAACTGCCTTAGTAGAA GCAGAGCGTTGCTTAAAGGTTCTTGAAGCACTTGATAGCAATGGAAGGCTGACACCTCTA GGTAAGGCCATGGCACAATATCCGATGAGTCCTCGCCACTCCCGTATGCTCCTTACAGTA ATCCAAATTATGCAAAAGATGAAAGATTATTCCCGCGCAAACACAGTCTTGGCTTATGCA GCTGCAGCAGCTGCAGCTTTGAGCTTGTCGAATCCTTTCCTTATGGAGTTTGAAGGGAAG AATAAAGATCTAGATGGCTTGAAGCAGGATGAAAAACCAGGATCAGCAGAAACTGAGAGA TACTTAGGGAAAGAGGAGAGAATGAGGATAAAAAAGCTGAAAGAAACTGCTAGAGTGTCT CGTGCAAAATTTTCGAACCCCACAAGTGATGTTTTGTCCGTGGCATATGCTCTGCAATGT TTTGAACTTTCTGGTCAACCACTGGAATTCTCCAAAGACAACACGTTACATTTTAAAACA ATGGAGGAAATGTCTAAGTTGAGGAAGCAGCTAATTAATCTTGTTTTCAACTCCAAACTA TGTGACTCACAGCAAAATTTCTCATGGCCTCACGGTACTTTGGAAGATGTAGAATGTGCT TGGAGGATTCCTTCAAACAAATGCCCTCTTCAACTGAATGAGGAGGAGATTCTGGGCCAA GCTATTTGTGCTGGCTGGGCTGACAGGGTTGCTAAACGTATTAAGGATGTTTCATCCTTA TCAGAATCTGACATGAATGTTCATGCAGTTCGATATCAGGCTTGCTTGGTAAAAGAAACT GTCTTCCTCCATCGAAGGTCATCTATTGCTAAATCTGCTCCGCAATATTTAGTCTACACT GAACTACTGCATACAAAAAGGCCATATATCCAAGGAGCAACTAGCGTGAAAGAGAATTGG CTCATTAAGTATGCTCCATCACTATGCAGTTTCTCTGCGCCCCTCTCAGATCCAAAACCT TATTATGACCCACTGAATGACCAGGTCCTCTGTTGGGTGAGTCCAACTTTTGGTCCTCAT CTATGGAAGCTCCCTCTGCATGGTTTGCCAATCGCAGATGATTTCCTCCGGGTGGCAGTA TTTGCTAGTTCCTTGCTTGAAGGCAAAGTTCTGCCTTGCCTAAAATCTGTACAGAAATTA TTGGCAGCCTCACCAGCTAGCATTTTGAAGCCTGAGGCGTTGGGCCTCAAGCGGGTTGGC GATCTTTTATACAAGATGAGGATCAAGAAGAAAGGGATTGATAGTTGTATCAAGCTAAGG AAGTTGTGGGATGATAATCCTCAAGAATTGTTTCCAGAAATTTTGGATTGGTTTCAGGAA GGATTTCATGAGCATTTTGAAGATCTTTGGGCAAAGATGCAACTTGAAATACTTTTAGAC CCAAAAAGACGTTTTTCGGAGAAGGTCAAGAGAAAGAAAAGGAAACCACGAGCTTCCGAT GATTAG

Peptide Sequence

PEP ID	Solyc01g095710.3.1
PEP Infomation	RNA helicase DEAH-box3
Sequence	MEFSANMNLDTDNWSQNDQDSNALILPDKKKKKKKEKEQVSKKLKPKNNSIKLSQSQKKK LKKLEEDKEKAVLLAESIKTLKKHQIQDDVYSLMWSSRNLGQGETSREKRRREIQFSRAG LDVPHRDRPVKKRTVDDLSSEVLYDSEEMQLSPIVNGHLLQSSIGEGGVPSDAPITPGSS QELACHSKLLVCDRDASVPSKQKEDRTAECLKSDYLQNHLSVHDCHNEGRRKSTDGAKAV QNAILSNSTNSANCSSERDLTTPVVVHVSRPKEVENNRSNLPIVMMEQEIMEAINDNTCV IVCGETGCGKTTQVPQFLYEAGYGSNHSNACGGIIGVTQPRRVAVLATAKRVAFELGVHL GKEVGFQVRHDRRIGDNCSIKFMTDGILLRELQNDFLLRRYSILILDEAHERSLNTDILI GMLSRIIRERQKEYEEQQKKLLSGQTIIPEERVYPLKLVLMSATLRVEDFISGRKIFRDP PPVIEVPTRQYPVTIHFSKRTEMVDYVGQAYKKILSIHKRLPPGGILVFVTGQREVEYLC QKLRKASKEIVDRASKDHSELSLASEGNTIREKVDREISEAFDVERSSLNEITESFNSYD EDHGESYEDDSDISYDSADDSDLDIYSDDDAGLLNQKSPSSDGKLDVLGEEGSLRSLKAA FEALAGKKMSEPDSGGKELVPITEEGMTSNESEPLLSKVRIGANGTCAGPMCVLPLYAML PASAQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYNSSNGMEGYEI QFISKASASQRAGRAGRTGPGHCYRLYSSAVFNDMFFDFSNAEILKVPVDGVVLLLKSMH IDKVANFPFPTPPEPTALVEAERCLKVLEALDSNGRLTPLGKAMAQYPMSPRHSRMLLTV IQIMQKMKDYSRANTVLAYAAAAAAALSLSNPFLMEFEGKNKDLDGLKQDEKPGSAETER YLGKEERMRIKKLKETARVSRAKFSNPTSDVLSVAYALQCFELSGQPLEFSKDNTLHFKT MEEMSKLRKQLINLVFNSKLCDSQQNFSWPHGTLEDVECAWRIPSNKCPLQLNEEEILGQ AICAGWADRVAKRIKDVSSLSESDMNVHAVRYQACLVKETVFLHRRSSIAKSAPQYLVYT ELLHTKRPYIQGATSVKENWLIKYAPSLCSFSAPLSDPKPYYDPLNDQVLCWVSPTFGPH LWKLPLHGLPIADDFLRVAVFASSLLEGKVLPCLKSVQKLLAASPASILKPEALGLKRVG DLLYKMRIKKKGIDSCIKLRKLWDDNPQELFPEILDWFQEGFHEHFEDLWAKMQLEILLD PKRRFSEKVKRKKRKPRASDD*

Transcript Sequence

Transcript ID	Solyc01g095710.3.1
Transcript Infomation	RNA helicase DEAH-box3
Sequence	AATAAAATGATAAAGATAAATATATTAAAACTTGAACAACAAAATTAGAAAAGAAGAGAT GGAATGATATGACAAAAGCAAAGAGAGATACAAGCAGACGTAGCAGCTTAGTCTCCATTT TGTGTATCTTTTACATTATTCTCGATATCCTTTTATAGGCATTATTACTCAGAATAGTTA TAGTGCTATATTATCCAAATTTGCTCCATAAGTTTAAGACCTAGGTCATCGACGGTCCTC TATGACTATGATGGTTGAAAATATCCATCAATTTAAAAACCATACCCACATATATTAACC CGAACCGGACCGACCCACCCGAATCTGCAAAAAAGTACCCTGTATCCCGCCGTCGCCGCA ATTCTTGGGCAAAATTTTTAGCAGCTCCATAAACTCACCCTTCCAAACCACCGTTAAACA CCCAAAACCAGCGACCGGACTCCGTTTTGAGTTTGAGGTCTTCCGGCGGAGCTCTGTTTA TGATTTCTACCTGAGTTAGAGTTTCTAAATGGGCCCGTTGTTCACTATTTCTTGTTCTGC CTAATTCTAGTTAATTATTTTTTCCCTTTAAGTTTTCTTGCTTCGTCTGTCTTACCCTAG AACCATCCTTGCCATTGAGATTACTGTGTGGTTGCTTGTTTAGTCGTGATAATGGAGTTT AGTGCAAATATGAACCTCGATACAGACAACTGGAGCCAGAATGATCAAGACAGCAATGCA CTTATATTGCCGGACAAGAAAAAGAAGAAGAAGAAAGAAAAGGAACAGGTGTCCAAAAAG CTTAAGCCTAAGAATAATAGTATTAAGTTAAGCCAATCGCAGAAAAAAAAGTTGAAGAAA CTCGAGGAAGACAAGGAGAAGGCAGTACTTTTAGCAGAAAGCATTAAGACCTTGAAGAAG CACCAGATCCAAGATGATGTTTATTCACTTATGTGGTCTTCAAGGAACTTGGGTCAGGGT GAAACTAGCCGAGAAAAACGTAGAAGAGAAATACAATTTTCTAGGGCAGGGCTAGACGTG CCACATAGGGATCGACCAGTCAAGAAGAGGACTGTTGACGACCTATCTAGTGAGGTCTTG TATGATTCTGAAGAAATGCAGCTTAGTCCAATAGTCAATGGCCACCTTTTGCAGTCCTCC ATAGGAGAAGGTGGTGTTCCAAGTGATGCACCCATTACACCAGGGTCTTCTCAGGAGTTG GCTTGCCATAGCAAACTTTTAGTATGCGATAGAGATGCTTCTGTGCCAAGTAAGCAAAAA GAGGATAGAACTGCAGAATGCTTAAAGTCAGATTATCTGCAAAATCACCTTTCTGTTCAT GATTGTCATAATGAGGGAAGGAGGAAATCAACGGATGGTGCCAAAGCTGTTCAAAATGCC ATCCTGAGCAATAGTACCAACTCAGCTAACTGTAGTTCTGAAAGAGATTTAACAACTCCA GTTGTGGTGCATGTTTCAAGACCAAAGGAGGTTGAAAATAACAGGAGCAATCTGCCGATA GTCATGATGGAGCAGGAGATAATGGAAGCCATAAATGACAACACTTGTGTAATAGTTTGT GGTGAGACTGGTTGTGGTAAGACAACCCAAGTGCCACAGTTCCTTTATGAAGCTGGCTAT GGTTCAAATCATTCCAATGCTTGTGGTGGTATTATTGGTGTGACTCAACCACGCCGTGTT GCGGTACTTGCAACTGCCAAGCGAGTGGCATTTGAGCTTGGTGTTCATCTTGGCAAAGAG GTTGGTTTTCAAGTTAGACATGACAGGAGGATAGGAGACAATTGTTCCATAAAGTTCATG ACTGATGGAATTTTGCTTCGCGAACTGCAGAATGATTTTCTTTTAAGGCGTTACTCGATC TTAATCTTGGACGAGGCTCACGAGAGGAGCTTGAACACCGATATACTAATCGGTATGCTT TCACGTATAATAAGAGAGCGTCAGAAAGAATATGAGGAGCAACAGAAGAAGCTTCTTTCG GGACAAACAATAATCCCTGAAGAGAGAGTTTATCCACTGAAACTTGTGCTGATGAGTGCT ACACTTCGAGTTGAGGACTTTATATCTGGCAGAAAAATTTTCCGTGATCCTCCCCCTGTA ATTGAAGTCCCTACTCGCCAATACCCAGTAACTATTCATTTCTCGAAGAGAACTGAGATG GTGGACTATGTTGGCCAAGCATATAAAAAAATATTGTCAATTCACAAAAGATTGCCACCT GGTGGTATACTTGTATTTGTGACAGGGCAAAGGGAAGTTGAATACTTGTGTCAAAAGCTG CGCAAAGCTTCTAAGGAGATAGTTGATAGAGCTTCAAAAGATCATAGTGAGCTATCTTTG GCATCTGAAGGGAATACTATCAGGGAGAAGGTTGACAGGGAGATAAGTGAGGCATTTGAT GTTGAAAGGAGTTCTTTAAATGAGATAACTGAAAGCTTCAATTCCTATGATGAGGATCAT GGGGAATCTTATGAAGATGACTCAGATATTTCGTATGATTCAGCAGATGATAGTGATTTG GATATTTATAGTGATGATGATGCAGGGCTGCTAAACCAGAAGTCTCCAAGCTCTGATGGT AAGTTAGATGTCTTAGGTGAGGAGGGAAGCCTAAGATCACTGAAAGCTGCTTTTGAAGCT TTGGCCGGTAAAAAAATGTCAGAGCCTGATTCCGGCGGAAAGGAACTTGTTCCTATCACT GAAGAAGGGATGACCTCAAATGAATCTGAACCTCTGTTAAGCAAGGTTAGGATCGGGGCT AACGGGACTTGTGCTGGTCCAATGTGTGTTCTACCTCTTTATGCTATGCTTCCGGCATCC GCACAGCTTCGTGTGTTTGAAGAGGTCAAGGAAGGAGAACGCCTTGTTGTTGTTGCCACT AATGTGGCTGAAACCTCATTGACCATTCCTGGTATTAAATATGTGGTTGATACAGGCAGA GAAAAGGTCAAAAACTACAACTCTTCTAACGGTATGGAAGGATATGAAATACAATTTATA AGTAAGGCTTCAGCTTCTCAGCGTGCAGGAAGGGCAGGAAGAACAGGTCCTGGGCACTGT TATCGGCTTTATTCTTCTGCAGTCTTCAATGACATGTTCTTTGACTTCTCAAATGCAGAA ATATTGAAAGTACCAGTTGATGGTGTTGTCCTACTTCTGAAGTCCATGCATATTGATAAG GTTGCTAACTTCCCTTTCCCGACTCCTCCTGAGCCAACTGCCTTAGTAGAAGCAGAGCGT TGCTTAAAGGTTCTTGAAGCACTTGATAGCAATGGAAGGCTGACACCTCTAGGTAAGGCC ATGGCACAATATCCGATGAGTCCTCGCCACTCCCGTATGCTCCTTACAGTAATCCAAATT ATGCAAAAGATGAAAGATTATTCCCGCGCAAACACAGTCTTGGCTTATGCAGCTGCAGCA GCTGCAGCTTTGAGCTTGTCGAATCCTTTCCTTATGGAGTTTGAAGGGAAGAATAAAGAT CTAGATGGCTTGAAGCAGGATGAAAAACCAGGATCAGCAGAAACTGAGAGATACTTAGGG AAAGAGGAGAGAATGAGGATAAAAAAGCTGAAAGAAACTGCTAGAGTGTCTCGTGCAAAA TTTTCGAACCCCACAAGTGATGTTTTGTCCGTGGCATATGCTCTGCAATGTTTTGAACTT TCTGGTCAACCACTGGAATTCTCCAAAGACAACACGTTACATTTTAAAACAATGGAGGAA ATGTCTAAGTTGAGGAAGCAGCTAATTAATCTTGTTTTCAACTCCAAACTATGTGACTCA CAGCAAAATTTCTCATGGCCTCACGGTACTTTGGAAGATGTAGAATGTGCTTGGAGGATT CCTTCAAACAAATGCCCTCTTCAACTGAATGAGGAGGAGATTCTGGGCCAAGCTATTTGT GCTGGCTGGGCTGACAGGGTTGCTAAACGTATTAAGGATGTTTCATCCTTATCAGAATCT GACATGAATGTTCATGCAGTTCGATATCAGGCTTGCTTGGTAAAAGAAACTGTCTTCCTC CATCGAAGGTCATCTATTGCTAAATCTGCTCCGCAATATTTAGTCTACACTGAACTACTG CATACAAAAAGGCCATATATCCAAGGAGCAACTAGCGTGAAAGAGAATTGGCTCATTAAG TATGCTCCATCACTATGCAGTTTCTCTGCGCCCCTCTCAGATCCAAAACCTTATTATGAC CCACTGAATGACCAGGTCCTCTGTTGGGTGAGTCCAACTTTTGGTCCTCATCTATGGAAG CTCCCTCTGCATGGTTTGCCAATCGCAGATGATTTCCTCCGGGTGGCAGTATTTGCTAGT TCCTTGCTTGAAGGCAAAGTTCTGCCTTGCCTAAAATCTGTACAGAAATTATTGGCAGCC TCACCAGCTAGCATTTTGAAGCCTGAGGCGTTGGGCCTCAAGCGGGTTGGCGATCTTTTA TACAAGATGAGGATCAAGAAGAAAGGGATTGATAGTTGTATCAAGCTAAGGAAGTTGTGG GATGATAATCCTCAAGAATTGTTTCCAGAAATTTTGGATTGGTTTCAGGAAGGATTTCAT GAGCATTTTGAAGATCTTTGGGCAAAGATGCAACTTGAAATACTTTTAGACCCAAAAAGA CGTTTTTCGGAGAAGGTCAAGAGAAAGAAAAGGAAACCACGAGCTTCCGATGATTAGTGA CTATTGAATGCCTTGCAGAATATATATCTGCTTATTTTGATGATCTGAACTCCGTTGACA TGTTAACACAGGCATAATATCTCGCTTCGTCAAAAACACAGGCATAATATCTCTGCCAGT GTGAGTTTTCTGTTTCTGAAGGCGCGAGTTTACATTATCTGTTAAAAATTTTGGTGTTTG GAGTTGGAAGATGGTATCAAGTTCAGAATCAAGGAACTTGATTTTCGATTTGGATGCAAT GACCTAATGAAGAAAGAAGATCCAACCAAAGACTAAAGCTACAAAGACACTCATCTTCTA ACATGGAAGAGAGCGTGTACACTGCAGGTTTGGACGCAACTTATACAAGAATTGAATATT TTGCCTTTAGATTCAATAGTTATTACAGAACATACGCAAAGTATTATACTTGGATAAAGA GGCTTCATTCTGTATCTAGTTAGTGTCTTGGGACTGCACGGTTAGAAAATAGAAATGTAG TTTGTGTTAATGATGATCGTCCTCGTAAT