Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g095460.3.1
CDS Infomation

TAF-2 (AHRD V3.3 *** Q40586_TOBAC)
Sequence

ATGGGAAATAGTGAGGATGGGAAATCCTGTAAGCTTGAGAAGCCATCCTCGCCTGCAGCG
GACCAGAGCAATCGCCATGTCTATCCAGATTGGGCAGCCATGCAGGCATATTATGGTCCT
CGAGTAGCTGTTCCTGCATATTTCAATTCAGCAGTTGCACCTGGTCATACCCCTCACCCT
TATATGTGGGGGCCACAGCCTATGGTACCACCTTATGGTACCCCTTATGCAGCAATATAT
GCTCATGGTGGGGTTTATGCACATCCTGGAGTTCCAATTGGATCTCATCCTCCAGGTCAT
GTGATGGCGACATCTCCTGTTGTCAGCCAAGCCATGGATGGTGCTTCTTTGAGTTTAGAT
GCGTCTGCGAAGTCCTCGGGAAATTCTGATAGAGGATTGATGTCTAAACTGAAGGAATTT
GAGGGGCTGGCAATGTCACTTGGAAATGGCAGCACTGACAATGTTGAGGGTGGAACAGAC
AATGGACATTCTCAAAGTGGGGAAACTGAAGGTTCAACTGATGGAAGTGACACAAACGGA
GCTGGGGTCAGTGAGAGAACTAAGAAAAGGAGCTGTGAGACAACTCCTGATAACTCTGGT
GATGATAAGAGCCACTCACAAAGATTTCAACCTACTGGGGAAGTAAATGATGATGCTGAG
AAGGCAATCGTTGTTGCAGCGAAAATGACGGGAACAGTACTTTCTCCTTGCATGACAACT
TTGGAAATGAGAAATCCTGCTAGTGCACATATGAAATCTAGCCCAACTAATGGTGGTTCA
CCACTCAGCCCTGCACTGCCTAATGAAACCTGGTTACAGAATGAGCGTGAGCTGAAGCGG
GAGAAAAGGAAACAGTCTAATCGGGAATCTGCAAGGCGATCAAGATTGAGAAAACAGGCT
GAAGCTGAAGAATTGGCAATACGAGTTCAGGCTTTAACAGGAGAGAACTTGACACTCAGA
TCCGAGATTAACAAATTAATGGAGAACTCGGAGAAACTGAAGCTAGACAATGCCACTTTA
ATGGAGAGACTGAAAAATGAACAGCTTGGACAGACAGAAGAAGTAAGTTTAGGTAAGATT
GATGATAAGAGACTGCAACCTGTAGGCACAGTAAACCTGCTAGCACGAGTGAACAACTCA
GGTTCCTCGGATACAACGAACGAGGATGGTGAAGTTTATGAGAACAACAGCTCTGGAGCA
AAGCTTCATCAACTACTTGATACCAGCCCCAGAACTGATGCAGTAGCAGCTGGGTGA

Peptide Sequence

PEP ID

Solyc01g095460.3.1
PEP Infomation

TAF-2 (AHRD V3.3 *** Q40586_TOBAC)
Sequence

MGNSEDGKSCKLEKPSSPAADQSNRHVYPDWAAMQAYYGPRVAVPAYFNSAVAPGHTPHP
YMWGPQPMVPPYGTPYAAIYAHGGVYAHPGVPIGSHPPGHVMATSPVVSQAMDGASLSLD
ASAKSSGNSDRGLMSKLKEFEGLAMSLGNGSTDNVEGGTDNGHSQSGETEGSTDGSDTNG
AGVSERTKKRSCETTPDNSGDDKSHSQRFQPTGEVNDDAEKAIVVAAKMTGTVLSPCMTT
LEMRNPASAHMKSSPTNGGSPLSPALPNETWLQNERELKREKRKQSNRESARRSRLRKQA
EAEELAIRVQALTGENLTLRSEINKLMENSEKLKLDNATLMERLKNEQLGQTEEVSLGKI
DDKRLQPVGTVNLLARVNNSGSSDTTNEDGEVYENNSSGAKLHQLLDTSPRTDAVAAG*

Transcript Sequence

Transcript ID

Solyc01g095460.3.1
Transcript Infomation

TAF-2 (AHRD V3.3 *** Q40586_TOBAC)
Sequence

TTGCATGACGTGGAATGTTGCCTTGGCGCTCCTCCTCTTTCTTCCCCCTTTCAGTTTCTC
TCTCTACTATCTTTTGCTCACGCCACACGCCCTTTCTCTGTTCTTTTTTTGAAGTTCCTT
TTAGAGAGAGAAAACATACACAGAGAATGCACAAACACTGAAACTTTTCACTACTAAAAT
TTGCCTCTCTCTTTCTGCTACTCTCTTCTACAGTTTTTTGAAGGGTTGCTTTTCTGAAGC
TAGTTGGGACAACACTCTTATCAGTGACTATAAAAGGAAATTCTGATTGCACCTCTAATT
TAGTACGACATCGACTTGGTTCCTATTACATGGGAAATAGTGAGGATGGGAAATCCTGTA
AGCTTGAGAAGCCATCCTCGCCTGCAGCGGACCAGAGCAATCGCCATGTCTATCCAGATT
GGGCAGCCATGCAGGCATATTATGGTCCTCGAGTAGCTGTTCCTGCATATTTCAATTCAG
CAGTTGCACCTGGTCATACCCCTCACCCTTATATGTGGGGGCCACAGCCTATGGTACCAC
CTTATGGTACCCCTTATGCAGCAATATATGCTCATGGTGGGGTTTATGCACATCCTGGAG
TTCCAATTGGATCTCATCCTCCAGGTCATGTGATGGCGACATCTCCTGTTGTCAGCCAAG
CCATGGATGGTGCTTCTTTGAGTTTAGATGCGTCTGCGAAGTCCTCGGGAAATTCTGATA
GAGGATTGATGTCTAAACTGAAGGAATTTGAGGGGCTGGCAATGTCACTTGGAAATGGCA
GCACTGACAATGTTGAGGGTGGAACAGACAATGGACATTCTCAAAGTGGGGAAACTGAAG
GTTCAACTGATGGAAGTGACACAAACGGAGCTGGGGTCAGTGAGAGAACTAAGAAAAGGA
GCTGTGAGACAACTCCTGATAACTCTGGTGATGATAAGAGCCACTCACAAAGATTTCAAC
CTACTGGGGAAGTAAATGATGATGCTGAGAAGGCAATCGTTGTTGCAGCGAAAATGACGG
GAACAGTACTTTCTCCTTGCATGACAACTTTGGAAATGAGAAATCCTGCTAGTGCACATA
TGAAATCTAGCCCAACTAATGGTGGTTCACCACTCAGCCCTGCACTGCCTAATGAAACCT
GGTTACAGAATGAGCGTGAGCTGAAGCGGGAGAAAAGGAAACAGTCTAATCGGGAATCTG
CAAGGCGATCAAGATTGAGAAAACAGGCTGAAGCTGAAGAATTGGCAATACGAGTTCAGG
CTTTAACAGGAGAGAACTTGACACTCAGATCCGAGATTAACAAATTAATGGAGAACTCGG
AGAAACTGAAGCTAGACAATGCCACTTTAATGGAGAGACTGAAAAATGAACAGCTTGGAC
AGACAGAAGAAGTAAGTTTAGGTAAGATTGATGATAAGAGACTGCAACCTGTAGGCACAG
TAAACCTGCTAGCACGAGTGAACAACTCAGGTTCCTCGGATACAACGAACGAGGATGGTG
AAGTTTATGAGAACAACAGCTCTGGAGCAAAGCTTCATCAACTACTTGATACCAGCCCCA
GAACTGATGCAGTAGCAGCTGGGTGATCCCCTAAATTTAATTTGAGATGTTAAAACTTAG
TCTGATTGTGTAATTTTGGCGTAATTTTAAGTCCAAAATTGCTACTAACTACGGGAGAGG
AACAGGTGAATAGGATTACGAGATTTCTAATTTTACCTACCTAATTGTAGTTTACAGGTC
AGTAGAACCGATGTGTGCTCTTTTTTCTGTTTTGCATTTCTGAGTTGAATGAATGTGGCT
ATAATAGCGTATGTAAAGTTTAATGTTCGACATACTAAAGACTTGATTTGAGGAAATACT
ATAGAACCGAAATGTTTTCGGTTTGGACGATGAAAGTGAACTTCATATTTGATAAATAAA
TGTGGTATGTTTATGATGTT