Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g095360.2.1
CDS Infomation

LOW QUALITY:Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT4G01200.1)
Sequence

ATGGAAGAGGGAACTCAAATTCTGGAGATCAACTTGATCTCTGCTCAATCCCTCAAAACC
CCAGTCGCTAACTTGCGCCGTATGCAAACTTATGCCATACTCTGGGTTGATTCATCAACC
AAGCTTCGTACGAAGATCGATCATCTAGGCGGCGAAAACCCTACATGGAATGACAAATTC
CTCTTCCGTGTTTCGCCGGAATTCATTTCGGGTGAAACCTCCGGTGTCTCTGTTGAAATC
TACGCCGTCGGCTACATCAAGGATTTTCTCATTGGTACTGTGCGTTTACTCATAAGTAGT
TGTCTTAAAGGAATTGCGAAACATGGAATTACTACTGCTACTCCGGCTTTCAATGCTGTA
CAAGTTAGGCGACCTTCTGGAAGATTCCATGGAGTTCTGAATATTGCTGCTGCGGTGTAT
AGTAGTTCGGATTTTTCGTTGTTAGATGGATTATCTGCCATCTGCTTCGGCGATTTGATG
GAAGAAAAAGAGAATGGTAGTCGATGGCGACGGCGACGTCTTAGCCGTGGAGGATCTAAG
CGCAGCGAGCCGCCACCATCATCGGGCGGCGAATCTTACGATTTCTCCGACGGTACTGAT
TCGACGACTTCTTCGTCGTCGTCATCGGCGGTGTCAATGGCGTTGAAAGATTGCAACTGT
GTACCAACAGTTACAGAAATGGCGGGAAAGAAGGATTTGAAATCTGACGGTGGAGGTTTG
CTGTGTGGATTGATGTTGCAGAAGAAGATCCCATTCTGTCCGTTCGATCAAAATTCATCG
TTCTGGACTGATTCCTTTGAGAAGGAACCATAA

Peptide Sequence

PEP ID

Solyc01g095360.2.1
PEP Infomation

LOW QUALITY:Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT4G01200.1)
Sequence

MEEGTQILEINLISAQSLKTPVANLRRMQTYAILWVDSSTKLRTKIDHLGGENPTWNDKF
LFRVSPEFISGETSGVSVEIYAVGYIKDFLIGTVRLLISSCLKGIAKHGITTATPAFNAV
QVRRPSGRFHGVLNIAAAVYSSSDFSLLDGLSAICFGDLMEEKENGSRWRRRRLSRGGSK
RSEPPPSSGGESYDFSDGTDSTTSSSSSSAVSMALKDCNCVPTVTEMAGKKDLKSDGGGL
LCGLMLQKKIPFCPFDQNSSFWTDSFEKEP*

Transcript Sequence

Transcript ID

Solyc01g095360.2.1
Transcript Infomation

LOW QUALITY:Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT4G01200.1)
Sequence

CGGCGAGCGGGGAGGAGAATCCTCTCTTTCTCTCTCTATCGCTCGGAGTAGTAGTTAGCT
CACATTATGAATTGAATCAAGAAAATTTTCGATTCTTCTTCTGGTTAAACGCACCAATCT
TCAATTGTTCATCAAAATGTATTATTATTAGCACACGGAAAAGCAGAATCTGGTGAGAAA
CAACAAGCTAAGCTCCGCCCCAAATGGAAGAGGGAACTCAAATTCTGGAGATCAACTTGA
TCTCTGCTCAATCCCTCAAAACCCCAGTCGCTAACTTGCGCCGTATGCAAACTTATGCCA
TACTCTGGGTTGATTCATCAACCAAGCTTCGTACGAAGATCGATCATCTAGGCGGCGAAA
ACCCTACATGGAATGACAAATTCCTCTTCCGTGTTTCGCCGGAATTCATTTCGGGTGAAA
CCTCCGGTGTCTCTGTTGAAATCTACGCCGTCGGCTACATCAAGGATTTTCTCATTGGTA
CTGTGCGTTTACTCATAAGTAGTTGTCTTAAAGGAATTGCGAAACATGGAATTACTACTG
CTACTCCGGCTTTCAATGCTGTACAAGTTAGGCGACCTTCTGGAAGATTCCATGGAGTTC
TGAATATTGCTGCTGCGGTGTATAGTAGTTCGGATTTTTCGTTGTTAGATGGATTATCTG
CCATCTGCTTCGGCGATTTGATGGAAGAAAAAGAGAATGGTAGTCGATGGCGACGGCGAC
GTCTTAGCCGTGGAGGATCTAAGCGCAGCGAGCCGCCACCATCATCGGGCGGCGAATCTT
ACGATTTCTCCGACGGTACTGATTCGACGACTTCTTCGTCGTCGTCATCGGCGGTGTCAA
TGGCGTTGAAAGATTGCAACTGTGTACCAACAGTTACAGAAATGGCGGGAAAGAAGGATT
TGAAATCTGACGGTGGAGGTTTGCTGTGTGGATTGATGTTGCAGAAGAAGATCCCATTCT
GTCCGTTCGATCAAAATTCATCGTTCTGGACTGATTCCTTTGAGAAGGAACCATAATAAA
CGGTCCAGATTCTTCTTATACAAATCAACGGTGATGATCGACTCAAAATCATTTCATTTG
CAAAAAAATCAAATCCACCCCTTTGAGTCTCATTAATTGCAGATTTCACCCATTCATTTG
TTTTTCCA