Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g095020.3.1
CDS Infomation	Chorismate synthase (AHRD V3.3 *** A0A0B0NMD4_GOSAR)
Sequence	ATGAGCTTGGAGAATGAAGATGGAAGCGCCACCAATCACATCTCTGAAATTGGTGATGAA GTTCGGAAGCATCCAAAAGTATCATATACAAGAGAGTTCCTTTTGTCACTCAGTCAACTG GAGATTTGCCAGAAGCTACCAACTGGGTTTGATCAGTTGATCCTGAGTGAGCTCGAGGAC ACCTCACGTGGCATACAAGACCGCCAAAAAATACCTGGAAGCTTGCCATCTCAAGGTTTC AGACGCAATGATTATAGTTCGTCTCCACCTACTCGTGGTGATTCTGATGGCAGTTCCAGA GGCATTTATGGAAGATGGGACAGCCGTTCGTCAGGGCGTAGTGATCGAGATAGTGATTCA CAATCAGATAAAGATTCAGATCCTGGTAGACGCTATGGTAATCAAGGCCGGCGCAGTTGG CAGAGTTCCGAGCATGATGGGCTTCTTGGAAGTGGTTCATTTCCCAGGCCATCTGCGTAT GCATCAGGGACTGCAACTAAGGTCCGTGCAAGTGATAATTATCTACTTAACAGGAGCAAT GAACCATACCATCCTCCTCGCCCCTATAAGGCAGTACCTCATTCTCGTAGAAACACTGAT GCATGCAATGATGAGACCTTTGGTTCAATTGAGTGTGCAAGTGAGGACAGAGTGGAGGAG GAAAGGAAAAGAAGAGCTTCTTTTGAGTTGATGAGGAAGGAACAGCAGAAGGCTCTTCAA GAGAAGCAGAAACCAAATGTAGAGAAGCACACAGCTGTATTTGATTCAGAAATCTCGGTA CTGCTGGAAGATGATAAGAAGGATCGGGGGCTTCTAGACAAGAATACTAAAGTAGATATA ATGGCCAGCCAGCCTATCGCAAACAATGATTCTGGAAAATCATCTTCCTCTTTGCTGAAT CTTCCATCTAGACCGCTTGTGCCCCCGGGCTTTAAAACCACTGTTACGGATAAGACTTCT GGCTCAACAACTTTGAACCATTCATGTTTGACAGAGATAGGGAAGCATGAAAGTGAAGAA ATTTTATTGGAAGCCAAAGCCGACGCCCGAAATGGTATCCATCAGAGCTTAGAAAAAGAG AGCTCCCAAGAAATTAGTTCGAGTGATCAACTTGAGCACAGTAGTTTGCATGCTTCATTT TTGAAGAAGAATGACCAAATTGTGAACTTGTCAGTGGGTTCAGTTGATTCCGATAGGAAA CATAGCACGAGAGGTCACTCACTCCGGACTTCAAGTCTAGAGGAACATGAAGCTTTGAAC AAGCCCTCGATTTTGGAACTCAGTGCCCAGAATTCAGGGGGAAAATATGTCGAGGAGTCC GATATCAACAATTCAAGTTCTATCCTGGATAAGATTTTTGGAAGTGCCATTGCAAATCTC ACCGACTCTGTTGCTCCAGTTATGAATGAAGGTAGTAAACCAAGTGAAACATTAGACTCC AAAGCTGTTCAATCATCGAAATTTGCTCATTGGTTTTTCGAAGAAGAGAGGAAACAGGAA GATGATCCTTCATCAAGCAGGCCTGGTGATCTGCTTGCATTAATTGTTGGTGGCGATAAA AACAGAACACAACCTTTTGAGGCTAATCCTTCAGATCAATTCCCATCAGAATTCTCCTAT CATAGTCCTGATCCTACAAGTAAGTTTGTCTCCAATTTTCCTTCTTCGCCACTTGGGGGG CCTGAGCCTGTGTATAAGCCCAGTAAGAGGGAGGCAGCACCCACAATTCTTACTTGTGAA GACCTTGAGCATACAATGTTGTCTGAGTTCAGCGAAAAGAAGTCTAATTCGCAGCCACAA GGCTGGAATACTAATCACACAAAGCCTAAGGAACCTGTAATTGTGGATAGCCAGGCATCT CAACACCTCCTTTCATTATTACAGAAGAGGCCAGATCATGGAAATGTGACAGAGAAGTCC AATGCTGGAATTGAATCCTTGGAGGCACGTGGCGATATTACCATGCAAGACAGATCTAAG AAGGAAGATAACAAGGATACACTCACACTTGAATCACTTTTTGGAACTGCTTTTATGACC GAATTACAATCTGCACAAGCTCCAGTTTCAGTTCAGAGGATTTCAGTTGGTTCTGGACAA AATGTTTCTCTGGAGGCTCAAAAATCATCCTTGCCTGGTTCTGATGATACCCTTTCTTCT TTGATAATTGATGATAGAGCAACTAAGGAGAATATTGTCTTATCTTCAAGTTGCAGAGAT CACACAAAGCTGGATAAGGCAGAAAACTGGTTGGGTTGCAATGATTCCTTGTATGAAGTC AATTCCTTGAGGCGCCAGACTGAAGCGGTCTCCAGAAATGGTGATTATCGGGCTGGTGGA TTTCATCTACCTGTTGGCGATCCTTTGGTACCCCAGGTCTCTACGTTTATGCCCGCAGAA AATATGGGTAAAAGTGATTTGATGACTGTTAATTCAGTTGGCAGTGATCAAATGTCTTTG ATGGGTCCAGGAGCACTGCCCTTTCCACGGGCTTCTCACGAACAGATAGAGTCTGAGATG CTGTTTCACCATCACCATCTCCATGGTCAACCATCATCTTCTCAATTTCATCCTTTGCAA ATGAATCAAGGGAAACCATTACTTCATCCATTGGATTCTCGTCCTGCTCATTTGAACACT CAGATTATGTCTGGTCCAGAGGGCATGACTCGACATGATGCCGTTCCAGGTCATCAATTT GCTGGAAACATGATGAGATCTCCTTTTCACCACCCTAATGCTAGGGTGACAGGGTTTGAT ATTCCTGCTCATCATCCTATGCTGCAGCAGATGCAAATGTCTGGACCTCACCCCCGTCAT CTGCTACATGACCGTCTAAGTGGTGCCCCAGTTCCTTCACATTCCAGTAATCAGGCAGCT GGCTTTGTGCATGAAGCTAACCCAATGCAAGGGTTCCCTTTTAAACCTCACCAAGTCAAC GTTAATGGGATCGGGATGCAAATTCCAGGCCCAGACATCAACAGCCGAAACAATCATCCT GATGCCCTGCAAAGGCTTATCGAGATGGAGCTTAGGGCTTCTAAGCAGATTCACCCTTTT CCTGCTGGGCGGGGACAGGGGATGTATGGTCACGAGCTTGACATGGGAATGCGACATAGA TAA

Peptide Sequence

PEP ID	Solyc01g095020.3.1
PEP Infomation	Chorismate synthase (AHRD V3.3 *** A0A0B0NMD4_GOSAR)
Sequence	MSLENEDGSATNHISEIGDEVRKHPKVSYTREFLLSLSQLEICQKLPTGFDQLILSELED TSRGIQDRQKIPGSLPSQGFRRNDYSSSPPTRGDSDGSSRGIYGRWDSRSSGRSDRDSDS QSDKDSDPGRRYGNQGRRSWQSSEHDGLLGSGSFPRPSAYASGTATKVRASDNYLLNRSN EPYHPPRPYKAVPHSRRNTDACNDETFGSIECASEDRVEEERKRRASFELMRKEQQKALQ EKQKPNVEKHTAVFDSEISVLLEDDKKDRGLLDKNTKVDIMASQPIANNDSGKSSSSLLN LPSRPLVPPGFKTTVTDKTSGSTTLNHSCLTEIGKHESEEILLEAKADARNGIHQSLEKE SSQEISSSDQLEHSSLHASFLKKNDQIVNLSVGSVDSDRKHSTRGHSLRTSSLEEHEALN KPSILELSAQNSGGKYVEESDINNSSSILDKIFGSAIANLTDSVAPVMNEGSKPSETLDS KAVQSSKFAHWFFEEERKQEDDPSSSRPGDLLALIVGGDKNRTQPFEANPSDQFPSEFSY HSPDPTSKFVSNFPSSPLGGPEPVYKPSKREAAPTILTCEDLEHTMLSEFSEKKSNSQPQ GWNTNHTKPKEPVIVDSQASQHLLSLLQKRPDHGNVTEKSNAGIESLEARGDITMQDRSK KEDNKDTLTLESLFGTAFMTELQSAQAPVSVQRISVGSGQNVSLEAQKSSLPGSDDTLSS LIIDDRATKENIVLSSSCRDHTKLDKAENWLGCNDSLYEVNSLRRQTEAVSRNGDYRAGG FHLPVGDPLVPQVSTFMPAENMGKSDLMTVNSVGSDQMSLMGPGALPFPRASHEQIESEM LFHHHHLHGQPSSSQFHPLQMNQGKPLLHPLDSRPAHLNTQIMSGPEGMTRHDAVPGHQF AGNMMRSPFHHPNARVTGFDIPAHHPMLQQMQMSGPHPRHLLHDRLSGAPVPSHSSNQAA GFVHEANPMQGFPFKPHQVNVNGIGMQIPGPDINSRNNHPDALQRLIEMELRASKQIHPF PAGRGQGMYGHELDMGMRHR*

Transcript Sequence

Transcript ID	Solyc01g095020.3.1
Transcript Infomation	Chorismate synthase (AHRD V3.3 *** A0A0B0NMD4_GOSAR)
Sequence	AACCAAATATTTGACAAACGTCATCTCCTTGGTTATGTTTTTTTTCTTGATAAAACAGAG AGAACCCACAAGCATCGTCTTCTCCTCCTCCTCTTCTCCCATTTTTACGACTATATACAT ACACACACAAACATATATCAACCTATACATACAGATATGTGTAGATAATCTGTATCTATC GCCATCAATCGAACAACTTCGAATTTGCAATCATCGAAACCCCAAACCCCCTCATTTGAT CCAGGATCGGAGCTGGAATTACTGTTCGGTAGCTGTGTATAATTTATATCCGGTTTCATT TGAATGGGAGTTTCGGGAATTTAGATTGATGCTGACCTTGGATTGACGTTTAGAATTTTG GGTTGTTTGATTATGATATAAATTTCGGTGATTTATTGCGAACTTGGATAGTTGGAATCT TATTGGATCGTTTTTTTCCTGAGGATGATTTGGGAGAAGTTTGTAGAACATGAATTGAAT CTTGTTTATTATTGTTGATTTATTGTATCAAGCTTTTGTGGGTGAAGCATATTTATTTGA TAGTGGTGCTACTTATTCGTCGTGGGTGAGGTAGCTGGTGCGCAAGTATGAGCTTGGAGA ATGAAGATGGAAGCGCCACCAATCACATCTCTGAAATTGGTGATGAAGTTCGGAAGCATC CAAAAGTATCATATACAAGAGAGTTCCTTTTGTCACTCAGTCAACTGGAGATTTGCCAGA AGCTACCAACTGGGTTTGATCAGTTGATCCTGAGTGAGCTCGAGGACACCTCACGTGGCA TACAAGACCGCCAAAAAATACCTGGAAGCTTGCCATCTCAAGGTTTCAGACGCAATGATT ATAGTTCGTCTCCACCTACTCGTGGTGATTCTGATGGCAGTTCCAGAGGCATTTATGGAA GATGGGACAGCCGTTCGTCAGGGCGTAGTGATCGAGATAGTGATTCACAATCAGATAAAG ATTCAGATCCTGGTAGACGCTATGGTAATCAAGGCCGGCGCAGTTGGCAGAGTTCCGAGC ATGATGGGCTTCTTGGAAGTGGTTCATTTCCCAGGCCATCTGCGTATGCATCAGGGACTG CAACTAAGGTCCGTGCAAGTGATAATTATCTACTTAACAGGAGCAATGAACCATACCATC CTCCTCGCCCCTATAAGGCAGTACCTCATTCTCGTAGAAACACTGATGCATGCAATGATG AGACCTTTGGTTCAATTGAGTGTGCAAGTGAGGACAGAGTGGAGGAGGAAAGGAAAAGAA GAGCTTCTTTTGAGTTGATGAGGAAGGAACAGCAGAAGGCTCTTCAAGAGAAGCAGAAAC CAAATGTAGAGAAGCACACAGCTGTATTTGATTCAGAAATCTCGGTACTGCTGGAAGATG ATAAGAAGGATCGGGGGCTTCTAGACAAGAATACTAAAGTAGATATAATGGCCAGCCAGC CTATCGCAAACAATGATTCTGGAAAATCATCTTCCTCTTTGCTGAATCTTCCATCTAGAC CGCTTGTGCCCCCGGGCTTTAAAACCACTGTTACGGATAAGACTTCTGGCTCAACAACTT TGAACCATTCATGTTTGACAGAGATAGGGAAGCATGAAAGTGAAGAAATTTTATTGGAAG CCAAAGCCGACGCCCGAAATGGTATCCATCAGAGCTTAGAAAAAGAGAGCTCCCAAGAAA TTAGTTCGAGTGATCAACTTGAGCACAGTAGTTTGCATGCTTCATTTTTGAAGAAGAATG ACCAAATTGTGAACTTGTCAGTGGGTTCAGTTGATTCCGATAGGAAACATAGCACGAGAG GTCACTCACTCCGGACTTCAAGTCTAGAGGAACATGAAGCTTTGAACAAGCCCTCGATTT TGGAACTCAGTGCCCAGAATTCAGGGGGAAAATATGTCGAGGAGTCCGATATCAACAATT CAAGTTCTATCCTGGATAAGATTTTTGGAAGTGCCATTGCAAATCTCACCGACTCTGTTG CTCCAGTTATGAATGAAGGTAGTAAACCAAGTGAAACATTAGACTCCAAAGCTGTTCAAT CATCGAAATTTGCTCATTGGTTTTTCGAAGAAGAGAGGAAACAGGAAGATGATCCTTCAT CAAGCAGGCCTGGTGATCTGCTTGCATTAATTGTTGGTGGCGATAAAAACAGAACACAAC CTTTTGAGGCTAATCCTTCAGATCAATTCCCATCAGAATTCTCCTATCATAGTCCTGATC CTACAAGTAAGTTTGTCTCCAATTTTCCTTCTTCGCCACTTGGGGGGCCTGAGCCTGTGT ATAAGCCCAGTAAGAGGGAGGCAGCACCCACAATTCTTACTTGTGAAGACCTTGAGCATA CAATGTTGTCTGAGTTCAGCGAAAAGAAGTCTAATTCGCAGCCACAAGGCTGGAATACTA ATCACACAAAGCCTAAGGAACCTGTAATTGTGGATAGCCAGGCATCTCAACACCTCCTTT CATTATTACAGAAGAGGCCAGATCATGGAAATGTGACAGAGAAGTCCAATGCTGGAATTG AATCCTTGGAGGCACGTGGCGATATTACCATGCAAGACAGATCTAAGAAGGAAGATAACA AGGATACACTCACACTTGAATCACTTTTTGGAACTGCTTTTATGACCGAATTACAATCTG CACAAGCTCCAGTTTCAGTTCAGAGGATTTCAGTTGGTTCTGGACAAAATGTTTCTCTGG AGGCTCAAAAATCATCCTTGCCTGGTTCTGATGATACCCTTTCTTCTTTGATAATTGATG ATAGAGCAACTAAGGAGAATATTGTCTTATCTTCAAGTTGCAGAGATCACACAAAGCTGG ATAAGGCAGAAAACTGGTTGGGTTGCAATGATTCCTTGTATGAAGTCAATTCCTTGAGGC GCCAGACTGAAGCGGTCTCCAGAAATGGTGATTATCGGGCTGGTGGATTTCATCTACCTG TTGGCGATCCTTTGGTACCCCAGGTCTCTACGTTTATGCCCGCAGAAAATATGGGTAAAA GTGATTTGATGACTGTTAATTCAGTTGGCAGTGATCAAATGTCTTTGATGGGTCCAGGAG CACTGCCCTTTCCACGGGCTTCTCACGAACAGATAGAGTCTGAGATGCTGTTTCACCATC ACCATCTCCATGGTCAACCATCATCTTCTCAATTTCATCCTTTGCAAATGAATCAAGGGA AACCATTACTTCATCCATTGGATTCTCGTCCTGCTCATTTGAACACTCAGATTATGTCTG GTCCAGAGGGCATGACTCGACATGATGCCGTTCCAGGTCATCAATTTGCTGGAAACATGA TGAGATCTCCTTTTCACCACCCTAATGCTAGGGTGACAGGGTTTGATATTCCTGCTCATC ATCCTATGCTGCAGCAGATGCAAATGTCTGGACCTCACCCCCGTCATCTGCTACATGACC GTCTAAGTGGTGCCCCAGTTCCTTCACATTCCAGTAATCAGGCAGCTGGCTTTGTGCATG AAGCTAACCCAATGCAAGGGTTCCCTTTTAAACCTCACCAAGTCAACGTTAATGGGATCG GGATGCAAATTCCAGGCCCAGACATCAACAGCCGAAACAATCATCCTGATGCCCTGCAAA GGCTTATCGAGATGGAGCTTAGGGCTTCTAAGCAGATTCACCCTTTTCCTGCTGGGCGGG GACAGGGGATGTATGGTCACGAGCTTGACATGGGAATGCGACATAGATAAGGTTAACGTC TTTTATGTGGTACTGATATAGACCATCACTTATGGGCAAGATATCAGGAGAAATGACATA ATACTTAGATTCTACTTTTTCGTACTAGGTGGTGGGTTTAGGGTTACTGTCTGTCATCTC TACATACATCAGTAAAGGAGTGGCAGGAATGGGCCACTGTATCGACATCTCTTACTATAT TGTGCAAACATGGTTGAAATTCTCGTCAGTTCTTCTTGATCTGATTGTTACCCGCTCGCT CCCTTATCCCCTTCCCTTTTCTTGGACATGTCTTTTAGTTTTCCCCAGAAAGAACTGTGT TGTATAGCACCAGAATACAGGCTATTCCTATTTCAAATATGGAGGCGCAGTAGCAATAGC AACGATGGGCATGGATGGTGCTGAAGAAGCAATCTGGTTTCCATGTGAGTGCCTTGTATT AGTAGATAATTGTTGAAAGGCAAAAAGGAGGACCTAGCTGGTCTATGAAGTGTTGTTTAT AAGTTGTTGTAATTAACTTAGACCTACAATGTTCAACTCGTTTGAATTGCAGGATAAAGA TCCTACTTGAACTAACATATTTCTGGAACTTCCAACTTCAAAACAAACTACTTTCCTAAT TCGACTTTAATACTCAAAATGAAACTCATATATTCTATTCACGATGATATTTTTCTAAAC AAAT