Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g094760.3.1
CDS Infomation

Origin recognition complex subunit 5 (AHRD V3.3 *** W9QP90_9ROSA)
Sequence

ATGGGCGATGAAGGAAATCCACAAACTCCTAGAAGAACCACTAGAGCATCATTGTCTAGC
ACACCGAATCCAAAAAGTTCGAAAGGGAAGTTAAAATCATGTAATCTGTTGCCTTTGACA
ATACATGACCTCGCTTATGGAGATGAATCAATTAGTTTCAATGATTTGATTTCTAGTTTA
CCTGGTAGACGTGCACAAATTATTGAATTATTACATCTTTTGGGCCCTTTGGATTCTCCA
ATGTTTCCTGTGTTTGTATATGGAGGTGCTTCAACTGGGAAAACAAGTTCGATTCTTCAG
ACATTTAAGTACCTAAAACGTCCATTTGTTTACTGTAGTTGTATAACGTGCTACAACCCA
AGGATACTATTTGAATCTGTGTTGAACCAGTTATTGCTTCATAGAAGAAATGAAGGCAAT
CGTTATTCCAGTACGAAACGCTGTGAAAGGCCCTCCGATTTTGTAAATCTTTTGCAGGAG
GCTCTTCATAATGTGGTAGATAGTTTGAAGGGAAATGTGGAGAAATCAAGCTCGAAGAAG
TCGGTAGGAAGGGCTAGTGGGAAAATGGTTTACTTGGTATTTGATAACTTGGAGCTTGCT
CGTGAATGGGATAAGAGTTCCAACACATTGCCTTTTCTCTTTAAGCTCTATGATATTCTG
AAAATGCCAGAAGTGGGTTTGATTTTTCTCAGTAATGCTTCACCTGACACCTATTACTCG
GACACTGGTTATGTAGAACCTGTTCCTGTTTACTTTCCTGATTACACCGAGGATGAGCTT
CGTCAAATCTTAATGAAAAACCAGAAAAACCCAAAGCTATATTCCTCATTTCTTGAAGTG
GTGTTGAGGCCATTTTGTCGAGTTACTCGGCAAGTTGATGAATTATTGACTGCATTCTCG
TCATTATATCAGATATATTGTGAACCACTTGATGATTTAGGCATTGTACCAAATGAAGAT
ATGAAAAGAAAATTATTTTCTCATCTTCAACCACATATTGGACCATCTCTGAACGAAACG
TTCAAAGTTGAAAGCAGGCTGTCTTCTGAAGCCTCAGCTAACACGAACAAATGCAAAGGC
ATTGCCAAGAAAGTTGGAGTTAGTGAATCTTCCAATGAGATAGACTTTCACATGTCTGCT
TGTGCAAAGTATCTTCTTATTTGTGCTTTCCTTGCTTCAAGAAATCCAGCTACCCTTGAC
GCATCCATGTTTGACTCAACCGGAGGCTCCAATAACAAAAAACGAAAGAGGAGCTCAGAG
AAGTCAAAAGAGAAGAAGGAAATTGCAGAACAAGAATTGCTCTTGAAGGGACCAGGAACG
TTTCCCTTGGAAAGATTATTAGCTATCTTTCAGTGTATTGTATCTGTGTCAGAATGCTTA
CCTGATGAAGAAGCACAAGGAGATGGTGGATTGGAAGGAGAGAGTTGGACTAACGGGCTA
TTGTCTGATGTTCTTTTGGAATTATCAAGTCTGTGTAATGCCAATTTTATCAGTAAAGGC
GGAAGTTGCCCCTTGGAAGGCGCTAATCGGTATCGATCTATGGTGTCTGAAGCTATGGCT
CTTAAGGTTGCAAAGAGTCTAAAATTTCCTCTGGCAAAGTATTTATATAGAGGAGGATGA

Peptide Sequence

PEP ID

Solyc01g094760.3.1
PEP Infomation

Origin recognition complex subunit 5 (AHRD V3.3 *** W9QP90_9ROSA)
Sequence

MGDEGNPQTPRRTTRASLSSTPNPKSSKGKLKSCNLLPLTIHDLAYGDESISFNDLISSL
PGRRAQIIELLHLLGPLDSPMFPVFVYGGASTGKTSSILQTFKYLKRPFVYCSCITCYNP
RILFESVLNQLLLHRRNEGNRYSSTKRCERPSDFVNLLQEALHNVVDSLKGNVEKSSSKK
SVGRASGKMVYLVFDNLELAREWDKSSNTLPFLFKLYDILKMPEVGLIFLSNASPDTYYS
DTGYVEPVPVYFPDYTEDELRQILMKNQKNPKLYSSFLEVVLRPFCRVTRQVDELLTAFS
SLYQIYCEPLDDLGIVPNEDMKRKLFSHLQPHIGPSLNETFKVESRLSSEASANTNKCKG
IAKKVGVSESSNEIDFHMSACAKYLLICAFLASRNPATLDASMFDSTGGSNNKKRKRSSE
KSKEKKEIAEQELLLKGPGTFPLERLLAIFQCIVSVSECLPDEEAQGDGGLEGESWTNGL
LSDVLLELSSLCNANFISKGGSCPLEGANRYRSMVSEAMALKVAKSLKFPLAKYLYRGG*

Transcript Sequence

Transcript ID

Solyc01g094760.3.1
Transcript Infomation

Origin recognition complex subunit 5 (AHRD V3.3 *** W9QP90_9ROSA)
Sequence

ACATGAGTAGTCGCACCAGATGGGTGCATAAATTTCATATTAATCTCCTATCTTTCCTTT
TGACAAAACAATTACTAATATCTACCTATCATGTGAGAGGTTTTCACTCGTATTATTATA
TTAAAAATCTTGATTGTAGGTTATAATTTACGGGATCATTAATATATTTATACTTGTATT
AAGCTTTGATGTCTATTTTGCTGTTTCTTATAATAACGATATATCTACTTTTTCTTTTAG
TTAATAATATACTTATATCTTTATATAAACTTGCTCTAATGGATCAACGATATATCTACT
TTTCCTACAATAAATAACATATTTATACCTTGATATAAATTAGCTTTAAGAGATCATCAA
TATGTTTCGAATTAATTTTGTATGGATTCGATGATAACTGATGTTTGAATTTGAAGTTCT
AATTTAAAATTGACTTTTCTTCTAGGATTTATGGGTAAAATCGTGACTTGTTTTACTTCA
CATACACATATTCAGAGAAACTTATTATTTTCTTTTCATTAAATAATTATATAAAATATT
TATTATTAAATTTAAGTTTTCAAAATATAATTAATAAAATAATTTTTTAAAGAGTATAGT
CACAGCTCGCATCTTTCATATTGGCGGGAAAATTAGCTGTCATACACCTAGGGTTGAATT
GATTAAAGACTCTTTTCAACTCCGTTTCTTCCTTCACCGGCCACCGCAAAATTCCGGCAG
ATTTCGTTTCTCCGACGACCAGCAAACTGCACCGCAAGGATTTTGGCACATAAGAAGAAA
TGGGCGATGAAGGAAATCCACAAACTCCTAGAAGAACCACTAGAGCATCATTGTCTAGCA
CACCGAATCCAAAAAGTTCGAAAGGGAAGTTAAAATCATGTAATCTGTTGCCTTTGACAA
TACATGACCTCGCTTATGGAGATGAATCAATTAGTTTCAATGATTTGATTTCTAGTTTAC
CTGGTAGACGTGCACAAATTATTGAATTATTACATCTTTTGGGCCCTTTGGATTCTCCAA
TGTTTCCTGTGTTTGTATATGGAGGTGCTTCAACTGGGAAAACAAGTTCGATTCTTCAGA
CATTTAAGTACCTAAAACGTCCATTTGTTTACTGTAGTTGTATAACGTGCTACAACCCAA
GGATACTATTTGAATCTGTGTTGAACCAGTTATTGCTTCATAGAAGAAATGAAGGCAATC
GTTATTCCAGTACGAAACGCTGTGAAAGGCCCTCCGATTTTGTAAATCTTTTGCAGGAGG
CTCTTCATAATGTGGTAGATAGTTTGAAGGGAAATGTGGAGAAATCAAGCTCGAAGAAGT
CGGTAGGAAGGGCTAGTGGGAAAATGGTTTACTTGGTATTTGATAACTTGGAGCTTGCTC
GTGAATGGGATAAGAGTTCCAACACATTGCCTTTTCTCTTTAAGCTCTATGATATTCTGA
AAATGCCAGAAGTGGGTTTGATTTTTCTCAGTAATGCTTCACCTGACACCTATTACTCGG
ACACTGGTTATGTAGAACCTGTTCCTGTTTACTTTCCTGATTACACCGAGGATGAGCTTC
GTCAAATCTTAATGAAAAACCAGAAAAACCCAAAGCTATATTCCTCATTTCTTGAAGTGG
TGTTGAGGCCATTTTGTCGAGTTACTCGGCAAGTTGATGAATTATTGACTGCATTCTCGT
CATTATATCAGATATATTGTGAACCACTTGATGATTTAGGCATTGTACCAAATGAAGATA
TGAAAAGAAAATTATTTTCTCATCTTCAACCACATATTGGACCATCTCTGAACGAAACGT
TCAAAGTTGAAAGCAGGCTGTCTTCTGAAGCCTCAGCTAACACGAACAAATGCAAAGGCA
TTGCCAAGAAAGTTGGAGTTAGTGAATCTTCCAATGAGATAGACTTTCACATGTCTGCTT
GTGCAAAGTATCTTCTTATTTGTGCTTTCCTTGCTTCAAGAAATCCAGCTACCCTTGACG
CATCCATGTTTGACTCAACCGGAGGCTCCAATAACAAAAAACGAAAGAGGAGCTCAGAGA
AGTCAAAAGAGAAGAAGGAAATTGCAGAACAAGAATTGCTCTTGAAGGGACCAGGAACGT
TTCCCTTGGAAAGATTATTAGCTATCTTTCAGTGTATTGTATCTGTGTCAGAATGCTTAC
CTGATGAAGAAGCACAAGGAGATGGTGGATTGGAAGGAGAGAGTTGGACTAACGGGCTAT
TGTCTGATGTTCTTTTGGAATTATCAAGTCTGTGTAATGCCAATTTTATCAGTAAAGGCG
GAAGTTGCCCCTTGGAAGGCGCTAATCGGTATCGATCTATGGTGTCTGAAGCTATGGCTC
TTAAGGTTGCAAAGAGTCTAAAATTTCCTCTGGCAAAGTATTTATATAGAGGAGGATGAT
ATAGAAGATGTCTGTTCATGTTGAAATGATTTTGCATGTCAAGCAAGAGAAACAAGTGAA
CATGATGCAGTCGACAACAATGCAACATCACCTAACCAACCCCTGTGGCAAGGTGAATGT
ACGATTAAGATTCTACTTATAGTTATTGTATACTCAGCAGCGAAAGGCTAAAGGGTAAGT
TGATTTTTTGTACTCCATGAAGAACAATTAAACAGTATCATCTATCGAAATACCCAAGCG
CTGAGTTCTTTGATTTTTCCTGTGTAAGAGTCTAAGTTAGTCCATTACTTTGCAGCCATT
GACCTCAATATTGTTAAAATACATGCATTTGAGACCTATAAAGATGGGAGACATTTTAAA
GATGGATGTCTCATTGTCATAATCCTTTGGGAATAGTTGATTCCTAGTACTACCTTTCTC
TAATTGGATTTGTTTCTTGATAAAGTTTCCTTGATTTTTAGTGGAACAATATCTACA