Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g094670.3.1
CDS Infomation

Aberrant root formation protein 4 (AHRD V3.3 *** A0A151RW33_CAJCA)
Sequence

ATGGATAGCAATACAAACTGGTCGGAACAAGGTAGAGGATCTCGTCGATGCCGGAGAAAT
CGATTGAGTCATTGCGCCGTCTCCATTTTTGATAGCGGCGTCCATTTTTACCGGCGTCAT
CGCCAATTTTACCAGCGAGATCAAAGTAACAACAACCTAACATCGCCGCCGATTACAATG
TCGGAAGAGAAACCACATCTCTCCGATTCCCTCATTCCTCGCCTCCAACAGACCCTGACT
ACATGCTCTCAGTTGATTGAAGCCGGTCACTTTAGCGATTCCGATGGATTAGTCACCGAG
CTTGCCGATTTCCTTTCTCCGATCTCCGTCTCAGTGGTGGAAGAACCATCAAATCTGGAT
TTAGAGATCACATCATTCGAGATTCTTACTGAAATTCATTCTTTCATAAATTCACCTTCC
AGAAACCAGCAAGTTATTGATGCTTTGTCCTTTGAGTTGCCCAAGTTGGTATGTAAATAT
GCATCTGCATCCAAAAGATGCTCTGAAATTGCTCAACTCATTGTTGAGCATCTCGTTAGT
ATGTGTTCTCCGCGGGAAATGCTATCGATTCTTTGCGAGGCGCTAAGTTCTCCAACGGAA
ATGTTTAGGGTTCCTTGCTATTTCTCTCCTCTTATTGGTGGCCTCGCTAAAGTTTTAATA
CTCATCAAAAGACGGCAATTTGAGCAAGTGAAAGCTGCAGTTCCTGTTATTCTTGGTGTT
TTAAAGTCCATGTCCTTAGAGGCAGACGAGGAAGGCAAAGATACTGAGGACATATTCCAC
AAAGCAATTGCTATTGCAGATTCAATACAAGCTGTTTGCGAAGGGTTGGAACAGAACGAT
AAGAAAAAACTCTGTGCTCTGTTGGGCATGTTCGTCTTGCAAGTCATGGCTCTTGTTTCA
ATTGCAATGGGGCATAACATTTCAAGTGTTCTTCCCATTATGGTACACCTATCACAGTTT
CTTCCAATTTGTGGTTTATCATACGAGGGATTAATTACTGGACATGATGTCGATAAGTTT
GCAACCATATGTGGAGATGATAACATGGCTTGCTTTTCTCATGTCAAGCATGGTGGATCA
CTTGCAGTAATCTGGGGTTACAAATCCAATGAGACATGTACAGATTTTGAAGCAGTGAAA
AATGAACTTCAGAAGAACCAGACTAAAAGATGGCAGGCAATAGGCATGTTAAAGCACGTC
TTCTCAAGTGTTGATCTATCATGGGAATTGAAAGTGCACGCTCTTGATTTCCTGCTTTGC
GTCATGGATGGATGTACGCATCAAGAAATTCAAAATGATGCAATGGACTACTCCACATAT
GTGCCTACTCTATATGCGTCATTGCAGGCGATTGAAATGGTCATTATATATGCACCGAAT
GCTGTTTTGCGGAAGAAATCTTTTGATGCTATGATGAAAGTGCTTGCAGATGTTCCAAGT
TCTTTAAGGTTTGACATCTTAACGGCTTTGATACAGAACAGCCAGTCTTCTTCTATGATT
GCAATCCTCTTAGATTGTATCAGAAGGGAAATGCACGAGGAATATAGTAGTTGTATCTCA
CTGAACAGTCAATGTCTCTCATTTTGGAGTGCTAGGGTTGTGGAACTAGTAGAGCTGGTT
GTGAAGCCTCCAAATGGTGGCCCTCCATCTCTTCCCGAGTACGGTGATGCTGTTTTATCA
GCGCTCAATCTCTATCGGTTTGTAGTGATCAGAGAGTCAACAGGAAAAACGAACTATACT
GGAGTGCTCTCGAAGGACATGTTGCAGAAGGCTTACAACGAATGGCTTCTTCCTTTGCGT
ACATTAGCCACAGGAGTCATGGCAGCAAACCAGCAGGATCATGACCAACTAGCATTGGAC
ACAATGTGTGCCTTGAACCCCATTGAGTTAGTTTTATATCGCTGTATTGAACTCGTTGAA
GATAATCTGAAACATGCATAG

Peptide Sequence

PEP ID

Solyc01g094670.3.1
PEP Infomation

Aberrant root formation protein 4 (AHRD V3.3 *** A0A151RW33_CAJCA)
Sequence

MDSNTNWSEQGRGSRRCRRNRLSHCAVSIFDSGVHFYRRHRQFYQRDQSNNNLTSPPITM
SEEKPHLSDSLIPRLQQTLTTCSQLIEAGHFSDSDGLVTELADFLSPISVSVVEEPSNLD
LEITSFEILTEIHSFINSPSRNQQVIDALSFELPKLVCKYASASKRCSEIAQLIVEHLVS
MCSPREMLSILCEALSSPTEMFRVPCYFSPLIGGLAKVLILIKRRQFEQVKAAVPVILGV
LKSMSLEADEEGKDTEDIFHKAIAIADSIQAVCEGLEQNDKKKLCALLGMFVLQVMALVS
IAMGHNISSVLPIMVHLSQFLPICGLSYEGLITGHDVDKFATICGDDNMACFSHVKHGGS
LAVIWGYKSNETCTDFEAVKNELQKNQTKRWQAIGMLKHVFSSVDLSWELKVHALDFLLC
VMDGCTHQEIQNDAMDYSTYVPTLYASLQAIEMVIIYAPNAVLRKKSFDAMMKVLADVPS
SLRFDILTALIQNSQSSSMIAILLDCIRREMHEEYSSCISLNSQCLSFWSARVVELVELV
VKPPNGGPPSLPEYGDAVLSALNLYRFVVIRESTGKTNYTGVLSKDMLQKAYNEWLLPLR
TLATGVMAANQQDHDQLALDTMCALNPIELVLYRCIELVEDNLKHA*

Transcript Sequence

Transcript ID

Solyc01g094670.3.1
Transcript Infomation

Aberrant root formation protein 4 (AHRD V3.3 *** A0A151RW33_CAJCA)
Sequence

ATGGATAGCAATACAAACTGGTCGGAACAAGGTAGAGGATCTCGTCGATGCCGGAGAAAT
CGATTGAGTCATTGCGCCGTCTCCATTTTTGATAGCGGCGTCCATTTTTACCGGCGTCAT
CGCCAATTTTACCAGCGAGATCAAAGTAACAACAACCTAACATCGCCGCCGATTACAATG
TCGGAAGAGAAACCACATCTCTCCGATTCCCTCATTCCTCGCCTCCAACAGACCCTGACT
ACATGCTCTCAGTTGATTGAAGCCGGTCACTTTAGCGATTCCGATGGATTAGTCACCGAG
CTTGCCGATTTCCTTTCTCCGATCTCCGTCTCAGTGGTGGAAGAACCATCAAATCTGGAT
TTAGAGATCACATCATTCGAGATTCTTACTGAAATTCATTCTTTCATAAATTCACCTTCC
AGAAACCAGCAAGTTATTGATGCTTTGTCCTTTGAGTTGCCCAAGTTGGTATGTAAATAT
GCATCTGCATCCAAAAGATGCTCTGAAATTGCTCAACTCATTGTTGAGCATCTCGTTAGT
ATGTGTTCTCCGCGGGAAATGCTATCGATTCTTTGCGAGGCGCTAAGTTCTCCAACGGAA
ATGTTTAGGGTTCCTTGCTATTTCTCTCCTCTTATTGGTGGCCTCGCTAAAGTTTTAATA
CTCATCAAAAGACGGCAATTTGAGCAAGTGAAAGCTGCAGTTCCTGTTATTCTTGGTGTT
TTAAAGTCCATGTCCTTAGAGGCAGACGAGGAAGGCAAAGATACTGAGGACATATTCCAC
AAAGCAATTGCTATTGCAGATTCAATACAAGCTGTTTGCGAAGGGTTGGAACAGAACGAT
AAGAAAAAACTCTGTGCTCTGTTGGGCATGTTCGTCTTGCAAGTCATGGCTCTTGTTTCA
ATTGCAATGGGGCATAACATTTCAAGTGTTCTTCCCATTATGGTACACCTATCACAGTTT
CTTCCAATTTGTGGTTTATCATACGAGGGATTAATTACTGGACATGATGTCGATAAGTTT
GCAACCATATGTGGAGATGATAACATGGCTTGCTTTTCTCATGTCAAGCATGGTGGATCA
CTTGCAGTAATCTGGGGTTACAAATCCAATGAGACATGTACAGATTTTGAAGCAGTGAAA
AATGAACTTCAGAAGAACCAGACTAAAAGATGGCAGGCAATAGGCATGTTAAAGCACGTC
TTCTCAAGTGTTGATCTATCATGGGAATTGAAAGTGCACGCTCTTGATTTCCTGCTTTGC
GTCATGGATGGATGTACGCATCAAGAAATTCAAAATGATGCAATGGACTACTCCACATAT
GTGCCTACTCTATATGCGTCATTGCAGGCGATTGAAATGGTCATTATATATGCACCGAAT
GCTGTTTTGCGGAAGAAATCTTTTGATGCTATGATGAAAGTGCTTGCAGATGTTCCAAGT
TCTTTAAGGTTTGACATCTTAACGGCTTTGATACAGAACAGCCAGTCTTCTTCTATGATT
GCAATCCTCTTAGATTGTATCAGAAGGGAAATGCACGAGGAATATAGTAGTTGTATCTCA
CTGAACAGTCAATGTCTCTCATTTTGGAGTGCTAGGGTTGTGGAACTAGTAGAGCTGGTT
GTGAAGCCTCCAAATGGTGGCCCTCCATCTCTTCCCGAGTACGGTGATGCTGTTTTATCA
GCGCTCAATCTCTATCGGTTTGTAGTGATCAGAGAGTCAACAGGAAAAACGAACTATACT
GGAGTGCTCTCGAAGGACATGTTGCAGAAGGCTTACAACGAATGGCTTCTTCCTTTGCGT
ACATTAGCCACAGGAGTCATGGCAGCAAACCAGCAGGATCATGACCAACTAGCATTGGAC
ACAATGTGTGCCTTGAACCCCATTGAGTTAGTTTTATATCGCTGTATTGAACTCGTTGAA
GATAATCTGAAACATGCATAG