Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g094610.3.1
CDS Infomation	Rop guanine nucleotide exchange factor, putative (AHRD V3.3 *** B9RDS3_RICCO)
Sequence	ATGGATAACATTTCAAGTACTGATGAAAGTTATGATGTGGGATATGGATATCAGCCATCA CCTTCTTCTATAGATGATCAATCGCCAACTGAAACAACAGGCCTTTCGACGTTGAGTGGC AATTCTTTTGCTTATTGCAGAACAAACTCAGAGACTTCAGCTTTTTCTGAGCACACAGAT GAGAATAGTTGGTCTGAGGCAGGTTCTCCTTTGAGCTCGCGGAGTTTGAAGTCTCCTACA CGTGCAGTGCTTTCGAGACTAGGAATGAGGCAGCACAAGACAATTGCAGATGACCCTGAC ACTGTAGATTTAGAGCTTGAATTGATGAAGGAGAGATTTTCGAAGCTGTTATTGGGAGAA GACATGTCAGGAGGAGGCAAAGGGGTAGCAACAGCAGTGACAATTTCAAACTCAATCACA AATCTTTATGCATCTGTGTTTGGTCAACACCAAAGATTGGAGCCTTTACATCCTGACAAG AAAATAATGTGGAAGAGAGAAATGAATTGTCTCTTATCTGTGTGTGATTACATTGTAGAA TTTGTTAGTACATCACAGATGCTACAAGATGGAACCACTATTGAGGCGTTGACAAGCAGA CCGCGGTCAGATATTCACATCAACCTTCCTGCATTGAGAAAACTCGATACCATGCTACTC GAAATCTTGGACAGTTTTGAGGCCACTGAGTTCTGGTATGCTGAGAAAGGAAGCATCTCA AACAACTCAACACGTGCTGGATCGTTCAGGAAGATTGTTCAGGTTCAGCCTCAGCCTCAA CGGAAGGAAGAGAAGTGGTGGTTACCAGTTGTTTGTGTTCCTTCTGATGGCATCACTGAG AAGGAAAGGAAGAACTTGAGACACAAACGCGATTGTGCCAACCAAATTCACAAAGCAGCA ATGGCCATCAATAGCAGTATCCTTGCTGAAATGGAAATCCCAGAATCATACATGACATCA CTCCCTAAGAGTGGAAAGGCAAGTGTTGGGGACTCTATGTATCGCCACATGTATTCAGCA GAGAAATTTTCCCCTGAACAGCTCCTTGACAGTCTAAACATAAGCTCTGAACATGAAGCT TTAGAGCTTGCTGACAAAGTAGAAGCTTCAATGTACACATGGAGACGTAAATCATGCTTG CCTCAAGCAAAATCATCATGGATCATGGTAAAAGATCTAGTCTCTGATGATCGAACTGAT AAGAATAATGTTTTAGCAGAACGAGCAGAAAGTTTGTTGTATTGTTTGAAGCAAAGGTAT CCTGAACTCTCACAAACAACATTGGACACAAGCAAGATTCATTTCAATAGGGATGTTGGC AAGGCTATCTTGGAGAGCTATTCTAGAGTACTAGAGAGTTTGGCGTTCAACGTTGTTGCT TGGATCGAAGATGTACTTTTTGTAGATAAGACAATGAAAAACCAAGAAGAATAG

Peptide Sequence

PEP ID	Solyc01g094610.3.1
PEP Infomation	Rop guanine nucleotide exchange factor, putative (AHRD V3.3 *** B9RDS3_RICCO)
Sequence	MDNISSTDESYDVGYGYQPSPSSIDDQSPTETTGLSTLSGNSFAYCRTNSETSAFSEHTD ENSWSEAGSPLSSRSLKSPTRAVLSRLGMRQHKTIADDPDTVDLELELMKERFSKLLLGE DMSGGGKGVATAVTISNSITNLYASVFGQHQRLEPLHPDKKIMWKREMNCLLSVCDYIVE FVSTSQMLQDGTTIEALTSRPRSDIHINLPALRKLDTMLLEILDSFEATEFWYAEKGSIS NNSTRAGSFRKIVQVQPQPQRKEEKWWLPVVCVPSDGITEKERKNLRHKRDCANQIHKAA MAINSSILAEMEIPESYMTSLPKSGKASVGDSMYRHMYSAEKFSPEQLLDSLNISSEHEA LELADKVEASMYTWRRKSCLPQAKSSWIMVKDLVSDDRTDKNNVLAERAESLLYCLKQRY PELSQTTLDTSKIHFNRDVGKAILESYSRVLESLAFNVVAWIEDVLFVDKTMKNQEE*

Transcript Sequence

Transcript ID	Solyc01g094610.3.1
Transcript Infomation	Rop guanine nucleotide exchange factor, putative (AHRD V3.3 *** B9RDS3_RICCO)
Sequence	ATGGATAACATTTCAAGTACTGATGAAAGTTATGATGTGGGATATGGATATCAGCCATCA CCTTCTTCTATAGATGATCAATCGCCAACTGAAACAACAGGCCTTTCGACGTTGAGTGGC AATTCTTTTGCTTATTGCAGAACAAACTCAGAGACTTCAGCTTTTTCTGAGCACACAGAT GAGAATAGTTGGTCTGAGGCAGGTTCTCCTTTGAGCTCGCGGAGTTTGAAGTCTCCTACA CGTGCAGTGCTTTCGAGACTAGGAATGAGGCAGCACAAGACAATTGCAGATGACCCTGAC ACTGTAGATTTAGAGCTTGAATTGATGAAGGAGAGATTTTCGAAGCTGTTATTGGGAGAA GACATGTCAGGAGGAGGCAAAGGGGTAGCAACAGCAGTGACAATTTCAAACTCAATCACA AATCTTTATGCATCTGTGTTTGGTCAACACCAAAGATTGGAGCCTTTACATCCTGACAAG AAAATAATGTGGAAGAGAGAAATGAATTGTCTCTTATCTGTGTGTGATTACATTGTAGAA TTTGTTAGTACATCACAGATGCTACAAGATGGAACCACTATTGAGGCGTTGACAAGCAGA CCGCGGTCAGATATTCACATCAACCTTCCTGCATTGAGAAAACTCGATACCATGCTACTC GAAATCTTGGACAGTTTTGAGGCCACTGAGTTCTGGTATGCTGAGAAAGGAAGCATCTCA AACAACTCAACACGTGCTGGATCGTTCAGGAAGATTGTTCAGGTTCAGCCTCAGCCTCAA CGGAAGGAAGAGAAGTGGTGGTTACCAGTTGTTTGTGTTCCTTCTGATGGCATCACTGAG AAGGAAAGGAAGAACTTGAGACACAAACGCGATTGTGCCAACCAAATTCACAAAGCAGCA ATGGCCATCAATAGCAGTATCCTTGCTGAAATGGAAATCCCAGAATCATACATGACATCA CTCCCTAAGAGTGGAAAGGCAAGTGTTGGGGACTCTATGTATCGCCACATGTATTCAGCA GAGAAATTTTCCCCTGAACAGCTCCTTGACAGTCTAAACATAAGCTCTGAACATGAAGCT TTAGAGCTTGCTGACAAAGTAGAAGCTTCAATGTACACATGGAGACGTAAATCATGCTTG CCTCAAGCAAAATCATCATGGATCATGGTAAAAGATCTAGTCTCTGATGATCGAACTGAT AAGAATAATGTTTTAGCAGAACGAGCAGAAAGTTTGTTGTATTGTTTGAAGCAAAGGTAT CCTGAACTCTCACAAACAACATTGGACACAAGCAAGATTCATTTCAATAGGGATGTTGGC AAGGCTATCTTGGAGAGCTATTCTAGAGTACTAGAGAGTTTGGCGTTCAACGTTGTTGCT TGGATCGAAGATGTACTTTTTGTAGATAAGACAATGAAAAACCAAGAAGAATAG