Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g094150.3.1
CDS Infomation

Katanin p60 ATPase-containing subunit (AHRD V3.3 *-* A0A1D1Y047_9ARAE)
Sequence

ATGAGTTTTCTTAAAGACTTGGCAGAAACCCTAAGCTCGATCTTCTCTGATACTCCATCA
TCGCCTTCGTCTCTGAACCATCCTCAGGAGAACTCCGGTGATCGGACGATGGATGGCGTT
GCCACCGGGAACGAACGCACGGCGTATAAGCTGAAAGGCTACTTTGAATTGGCCAAAGAA
GAGATCGCCAAAGCTGTTAGAGCTGAAGAATGGGGCTTGGCTGATGAAGCAATTGCACAT
TACCATAATTCTCAAAAGATACTCGCCGAAGGCATTTCTACTCCGGTTCCTTCCTATATA
GCTTCTAGTGAACACGAGAAAGTGAAATCATATCGTCAAAAGATATCAAAATGGCAGTCT
CAAGTTTCAGACAGACTTCAGACTCTAAGTCGGCGAGCAGGTGGCACACCTTCAGTCAAG
CAGTCAGAACCACAATCCCAAAGAGTGGCTGTTTCACAATCAAGTTCGTCTGCTCGAAAA
GGAGCATCTCTATCTGCACCTTCTTCAGGGAAAGTCAGCTCTGCTACGAGGGTTCCAAGT
AATAGAATATCAAGTCATAAACCTTCACAGGAATCTGCCACTGCTGATGGGTCTGATCCA
AAGTTGGTTGAGATGATAAATTCTGTAATTGTGGATAGAAGCCCGTCTGTTAAATGGGAA
GATATTGCTGGCCTTGAAAAGGCAAAGCAAGCTCTTTTAGAGATGGTAATTCTACCAACC
AAAAGAAAGGACCTCTTCACTGGCTTGAGAAAGCCTGCTAGAGGTCTACTTCTTTTTGGC
CCACCAGGTACTGGAAAAACCATGCTTGCCAAAGCAGTAGCATCAGAGTCACAAGCAACC
TTTTTCAATGTGTCTGCTTCTTCGTTAACATCAAAGTGGGTCGGAGAGGGTGAAAAGCTT
GTCAAGACATTGTTCATGGTTGCCATTTCCAGGCAGCCATCTGTAATTTTCATGGATGAG
ATAGATAGTATTATGTCAACTAGGACTACCAATGAGAATGAAGCAAGCAGAAGGTTGAAG
TCAGAGTTTCTAGTTCAGTTTGATGGGGTGACATCAAATTCCGAGGGCCTGGTAATTGTA
ATTGGTGCAACGAATAAGCCACAGGAGTTGGATGATGCTGTTCTAAGGAGATTGGTGAAA
AGAATATATATACCTCTACCTGATGCTAGTGTTAGAAGACAACTTCTGAAACACAGACTA
AAGGGGAAAGCTTTTTCTTTGCCTGGTGGAGATCTAGAACGACTGGTGAGAGACACAGAA
GGGTATTCTGGAAGTGATCTTCAAGCCTTATGCGAGGAGGCTGCAATGATGCCAATCAGA
GAGCTTGGTGCTAACATTCTCTCTGTCCAGGCAAATCAGGTGAGGGGTTTAAGATATGGA
GATTTTCAGAAGGCCATGACAGTGATTAGGCCTAGCCTGCAAAAGAGCAAGTGGGAGGAG
CTTGAAAAGTGGAATCAAGAGTTTGGTGCAAACTAA

Peptide Sequence

PEP ID

Solyc01g094150.3.1
PEP Infomation

Katanin p60 ATPase-containing subunit (AHRD V3.3 *-* A0A1D1Y047_9ARAE)
Sequence

MSFLKDLAETLSSIFSDTPSSPSSLNHPQENSGDRTMDGVATGNERTAYKLKGYFELAKE
EIAKAVRAEEWGLADEAIAHYHNSQKILAEGISTPVPSYIASSEHEKVKSYRQKISKWQS
QVSDRLQTLSRRAGGTPSVKQSEPQSQRVAVSQSSSSARKGASLSAPSSGKVSSATRVPS
NRISSHKPSQESATADGSDPKLVEMINSVIVDRSPSVKWEDIAGLEKAKQALLEMVILPT
KRKDLFTGLRKPARGLLLFGPPGTGKTMLAKAVASESQATFFNVSASSLTSKWVGEGEKL
VKTLFMVAISRQPSVIFMDEIDSIMSTRTTNENEASRRLKSEFLVQFDGVTSNSEGLVIV
IGATNKPQELDDAVLRRLVKRIYIPLPDASVRRQLLKHRLKGKAFSLPGGDLERLVRDTE
GYSGSDLQALCEEAAMMPIRELGANILSVQANQVRGLRYGDFQKAMTVIRPSLQKSKWEE
LEKWNQEFGAN*

Transcript Sequence

Transcript ID

Solyc01g094150.3.1
Transcript Infomation

Katanin p60 ATPase-containing subunit (AHRD V3.3 *-* A0A1D1Y047_9ARAE)
Sequence

GCCACTTACTTTCGAGAAAGAATATATATTTATATAAATAGTAGTAATATTACATAACAA
GGAAGTAAAATAAAATGGGAAGAATAATCAAGAAGGAACTTGATTTTCAAGCTACCAATA
GAATTTCTGTAAAGTAAATCTGGAAATAGTCAGTCCTCCATTAATCATCCTTTAAAATTC
ATAAAAAAAATAAACAATTTCTTGAAGATCATATTTACCTCAAAACCAAACAGGACCTTA
AGATGCTAAATTTTCCGATTCTCCATTAATACAAATTCCTCCCAAATGAGTTTTCTTAAA
GACTTGGCAGAAACCCTAAGCTCGATCTTCTCTGATACTCCATCATCGCCTTCGTCTCTG
AACCATCCTCAGGAGAACTCCGGTGATCGGACGATGGATGGCGTTGCCACCGGGAACGAA
CGCACGGCGTATAAGCTGAAAGGCTACTTTGAATTGGCCAAAGAAGAGATCGCCAAAGCT
GTTAGAGCTGAAGAATGGGGCTTGGCTGATGAAGCAATTGCACATTACCATAATTCTCAA
AAGATACTCGCCGAAGGCATTTCTACTCCGGTTCCTTCCTATATAGCTTCTAGTGAACAC
GAGAAAGTGAAATCATATCGTCAAAAGATATCAAAATGGCAGTCTCAAGTTTCAGACAGA
CTTCAGACTCTAAGTCGGCGAGCAGGTGGCACACCTTCAGTCAAGCAGTCAGAACCACAA
TCCCAAAGAGTGGCTGTTTCACAATCAAGTTCGTCTGCTCGAAAAGGAGCATCTCTATCT
GCACCTTCTTCAGGGAAAGTCAGCTCTGCTACGAGGGTTCCAAGTAATAGAATATCAAGT
CATAAACCTTCACAGGAATCTGCCACTGCTGATGGGTCTGATCCAAAGTTGGTTGAGATG
ATAAATTCTGTAATTGTGGATAGAAGCCCGTCTGTTAAATGGGAAGATATTGCTGGCCTT
GAAAAGGCAAAGCAAGCTCTTTTAGAGATGGTAATTCTACCAACCAAAAGAAAGGACCTC
TTCACTGGCTTGAGAAAGCCTGCTAGAGGTCTACTTCTTTTTGGCCCACCAGGTACTGGA
AAAACCATGCTTGCCAAAGCAGTAGCATCAGAGTCACAAGCAACCTTTTTCAATGTGTCT
GCTTCTTCGTTAACATCAAAGTGGGTCGGAGAGGGTGAAAAGCTTGTCAAGACATTGTTC
ATGGTTGCCATTTCCAGGCAGCCATCTGTAATTTTCATGGATGAGATAGATAGTATTATG
TCAACTAGGACTACCAATGAGAATGAAGCAAGCAGAAGGTTGAAGTCAGAGTTTCTAGTT
CAGTTTGATGGGGTGACATCAAATTCCGAGGGCCTGGTAATTGTAATTGGTGCAACGAAT
AAGCCACAGGAGTTGGATGATGCTGTTCTAAGGAGATTGGTGAAAAGAATATATATACCT
CTACCTGATGCTAGTGTTAGAAGACAACTTCTGAAACACAGACTAAAGGGGAAAGCTTTT
TCTTTGCCTGGTGGAGATCTAGAACGACTGGTGAGAGACACAGAAGGGTATTCTGGAAGT
GATCTTCAAGCCTTATGCGAGGAGGCTGCAATGATGCCAATCAGAGAGCTTGGTGCTAAC
ATTCTCTCTGTCCAGGCAAATCAGGTGAGGGGTTTAAGATATGGAGATTTTCAGAAGGCC
ATGACAGTGATTAGGCCTAGCCTGCAAAAGAGCAAGTGGGAGGAGCTTGAAAAGTGGAAT
CAAGAGTTTGGTGCAAACTAAAGGCTCGACTCTTGAACATTCTATGCAATCTCAAGTAAG
CTAAAACAAAAGTTCACGACAGGCCAGCAGATGATAAATTTGTTTCTTGGGCAGATCAGC
ATCCTGACTGTACGTGTACATACTTAAGAATTTAAATTTGATTATTAGCCAAAATTTGGA
GTATATAATTCTGAGGGAATCATGTCTAGATGATCACGACATGTGTTCTGTGGTTCCCCG
TTATGTGTAGACGTTTGTATAGGAATTGACAGTTGAATACACACTTTTGTTGTAGTGATG
ATGCTCTTAGCTCTTCCTACACTTTACCATCAAATAAATTCATTTACGAAGGGAGTGTGA
TGTATAACCTCCTCTATGACATGAAGCTATATAGAAGAGGGTGATTTT