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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g091880.3.1
CDS Infomation

ATPase ASNA1 homolog (AHRD V3.3 *** K4AZC8_SOLLC)
Sequence

ATGGCTTCCAATAATCAAGATTTACCAGAAGCAACAGTTCAAAACGTGCTAGAACAAGAT
ACCCTTAAGTGGGTATTTGTAGGGGGTAAAGGTGGGGTTGGAAAAACTACATGTAGTTCA
ATTCTTGGTATTCTTCTTTCACAGTTCAGATCCTCTGTTCTTATCATATCTACTGACCCT
GCTCACAATCTCAGTGATGCCTTCCAGCAACGCTTTACCAAGTCCCCCACTCTTGTTAAT
GGCTTCTCCAATTTGTATGCCATGGAAATCGATCCAACTGTGGAGAAAGAAGACTCAATC
AGTTCAGATGGGATGGACGATTTTTTGTCTGATTTGGCAAATGCAATTCCTGGAATTGAT
GAAGCTATGAGTTTTGCCGAGATGCTAAAATTGGTGCAAACAATGGACTATTCAGTAATA
GTGTTTGATACGGCCCCAACTGGACATACTCTTCGGCTGTTACAATTCCCGTCGACTCTA
GAGAAAGGGCTCGCCAAAGTGATGAGTTTAAAGAGTAGATTTGGGGGCATGCTGAGTCAG
ATGACTCGACTATTGGGTGTTGATGAGGAATTTGGGGAGGCTGCTCTCCTTGGCAAGCTA
GAAGGCATGAAAGATATTATTGAAGAAGTGAACAGACAGTTTAAGGACCCAGACTTGACA
ACATTTGTTTGTGTTTGCATTCCGGAATTCCTCTCCCTATATGAGACTGAAAGACTAGTT
CAGGAACTTGCTAAATTTGAGATCGATACACACAACATTATAATTAACCAGGTGATATTT
GACGAAGAAGTTGTTGAATCCAAGCTGCTGAAGGCTAGAATGCGGATGCAACAGAAGTAC
TTGGATCAGTTCTACATGTTGTATGATGACTTTAACATTACGAAATTGCCTTTGCTGCCA
CAAGAGGTTTGTGGCGTTGAAGCCCTGAAAGAATTTTCACATCATTTTGTAACGCCATAC
CAGCCCTCTCTTGCTCGAGGCTCGGTGGAGGAGTTGCAGAATAGAGTTGCTGCATTGAAA
TTACTGTTGAAAGATGCTGAAGCAGAATTAGAGAGAGTTCAAAAAGGCAAACAGAAGATA
TAA

Peptide Sequence

PEP ID

Solyc01g091880.3.1
PEP Infomation

ATPase ASNA1 homolog (AHRD V3.3 *** K4AZC8_SOLLC)
Sequence

MASNNQDLPEATVQNVLEQDTLKWVFVGGKGGVGKTTCSSILGILLSQFRSSVLIISTDP
AHNLSDAFQQRFTKSPTLVNGFSNLYAMEIDPTVEKEDSISSDGMDDFLSDLANAIPGID
EAMSFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPSTLEKGLAKVMSLKSRFGGMLSQ
MTRLLGVDEEFGEAALLGKLEGMKDIIEEVNRQFKDPDLTTFVCVCIPEFLSLYETERLV
QELAKFEIDTHNIIINQVIFDEEVVESKLLKARMRMQQKYLDQFYMLYDDFNITKLPLLP
QEVCGVEALKEFSHHFVTPYQPSLARGSVEELQNRVAALKLLLKDAEAELERVQKGKQKI
*

Transcript Sequence

Transcript ID

Solyc01g091880.3.1
Transcript Infomation

ATPase ASNA1 homolog (AHRD V3.3 *** K4AZC8_SOLLC)
Sequence

AAATGAAGCCTTTTTCCAGTTAAATTGGACTTGGATTGCTAAAATCTTTATACAATTACC
CCTAAACCTCTTAAACAAGTAGTCCAGATCCCTTGCCGCTGTCTCAAACAAACAAATTCA
AGTTTCTAATTATAACAAACCAGACTCTTCTTCTTTTGGTCTCTCTATTTTCTCTCCCTA
GTCTTTTGGAATTTCCCCTATATCCATGGCTTCCAATAATCAAGATTTACCAGAAGCAAC
AGTTCAAAACGTGCTAGAACAAGATACCCTTAAGTGGGTATTTGTAGGGGGTAAAGGTGG
GGTTGGAAAAACTACATGTAGTTCAATTCTTGGTATTCTTCTTTCACAGTTCAGATCCTC
TGTTCTTATCATATCTACTGACCCTGCTCACAATCTCAGTGATGCCTTCCAGCAACGCTT
TACCAAGTCCCCCACTCTTGTTAATGGCTTCTCCAATTTGTATGCCATGGAAATCGATCC
AACTGTGGAGAAAGAAGACTCAATCAGTTCAGATGGGATGGACGATTTTTTGTCTGATTT
GGCAAATGCAATTCCTGGAATTGATGAAGCTATGAGTTTTGCCGAGATGCTAAAATTGGT
GCAAACAATGGACTATTCAGTAATAGTGTTTGATACGGCCCCAACTGGACATACTCTTCG
GCTGTTACAATTCCCGTCGACTCTAGAGAAAGGGCTCGCCAAAGTGATGAGTTTAAAGAG
TAGATTTGGGGGCATGCTGAGTCAGATGACTCGACTATTGGGTGTTGATGAGGAATTTGG
GGAGGCTGCTCTCCTTGGCAAGCTAGAAGGCATGAAAGATATTATTGAAGAAGTGAACAG
ACAGTTTAAGGACCCAGACTTGACAACATTTGTTTGTGTTTGCATTCCGGAATTCCTCTC
CCTATATGAGACTGAAAGACTAGTTCAGGAACTTGCTAAATTTGAGATCGATACACACAA
CATTATAATTAACCAGGTGATATTTGACGAAGAAGTTGTTGAATCCAAGCTGCTGAAGGC
TAGAATGCGGATGCAACAGAAGTACTTGGATCAGTTCTACATGTTGTATGATGACTTTAA
CATTACGAAATTGCCTTTGCTGCCACAAGAGGTTTGTGGCGTTGAAGCCCTGAAAGAATT
TTCACATCATTTTGTAACGCCATACCAGCCCTCTCTTGCTCGAGGCTCGGTGGAGGAGTT
GCAGAATAGAGTTGCTGCATTGAAATTACTGTTGAAAGATGCTGAAGCAGAATTAGAGAG
AGTTCAAAAAGGCAAACAGAAGATATAATCAAATGCTATACAAAGTTGGGCGGTGGAGTG
TGCTGTTTCGTTGCCTTTTGCTTTTTTATGTTTTAGGAGTTGTCATTGAACAAATAATTG
TGTATTTCTCAAGAGGATTTTTCATGTATGATTGTTTTATTTATTGTTGAGGAAGTTCAT
TTGTACCTTCACAAAGCTAATAAGTCAGGATATTAGTCGTACAATGTACTAGTAGTCTCT
TTAGATTCATCAAGTCAAGTCTTTATTTAGTGAAACCTAAAGCATCAAAGTTTTTTTTGA
AGATAATGAACAATTTTTATTCCAATCATGAATT