Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g091860.3.1
CDS Infomation

SET domain-containing protein (AHRD V3.3 *** AT1G01920.2)
Sequence

ATGGCGACTCCTGAAGAAGCTAAGCTCCACCAGTTTCTTCAATGGCTAAAGTTAAACAGA
GCAGAACTACGTGGTTGCAGAATCAAATACAGTGAATCCAGTAAAGGGTTTGGAATTTTC
TCATCTAATCATGCATCTGATGGGATACTACTGGTGGTTCCATTAGATTTGGCTATAACT
CCAATGGGTGTACTTCAAGATCCTCTTCTTGGACCTGAATGTAGGGCTATGTTTGAGGAA
GGGGAAGTAGATGATAGACTCTTGATTACCTTATTTCTAACTGTGGAGCACCTACGAGAA
AACTCTTCATGGAAGCCGTACTTTGATATGCTTCCAACCACATTCGGGAATCCACTTTGG
TTTTCTGAAGACGAGCTTTTAGAGCTTAAAGGAACCACATTGTATCGGGCTGCTCAGTTG
CAGAAAAAAACACTGCAGTCTTTATTTGATGAAAAGGTGAAAAGGTTGGCTAAGAAGCTT
TTAACTCTTGATGGACATCCAGAAAGAGATGTGAAGTTTGAAGACTTCCTTTGGGCAAAC
TCCATATTTTGGAGTCGAGCACTAAATATCCCTTTTCCGCGCTGCTATATATTTCCTATG
AATTCAGAAGGACAAGATAGTGACATTTCTAGCAAAGTCATCAATTCTGCAATACAAACT
AATGGTTGCGGCAGTTTATCTAATGGAGAGTCTGCAAAAGTACCCGAATATGATACACTC
CAAGATAAAGTTGCTTCTGCTGCTTCCGTTTCACAAGGAGAGATAGTTTGGGTGGAAGGT
CTGGTCCCAGGCATTGATTTTTGCAACCATGATTTCAAAGCTGCAGCAACATGGGAAGTT
GATGGAACAGGAGCAACAACTGGAGTTCCTTTCTCCATGTACCTTCTTTCTGCTGGAGAA
AATCCTTCCCTGATCGAGAAAGAGATATCAATTAGCTATGGGAACAAGGGAAATGAGGAA
CTGCTGTACCTGTATGGATTCGTCATGAATGATAATCCTGATGACTACCTCATGGTTCAT
TATCCGGTGGAAGCTATTCAAAACGTTGATTTCTCAGATTCGAAAGCTCAACTTCTTGAA
GCACAGAAAGCTGAATTGAGATGTCTCTTACCCCGAAGTTTGCTAAATCGCGGATTTTTC
CCTCCATCCAACTCATCTGAGGAAGATAAAGATAAACCCGTCAGTAGTCAACTTTGTAAC
TATAGTTGGAGTGGTCAGCGAAAGACGCCCTCTTACTTGCACAAGCTAGTTTTTCCTGCA
GACTTTTTGAATGCATTGAGAACCTTAGCAATGAAAGAAAATGAGCTTTATCGTGTTTCT
TCTCTACTTGAGGAGCTTGTTGGATCTGGAGGAGAAAGGCAGCCAACTGACACAGAAGTT
CAAGCAGCAGTATGGGAGGCTTGTGGAGATTCTGGAGCTTTACAACTTCTTGTTGATCTG
CTTAACATGAAGATGATGGATCTGGAAGAGGGTTCAGGAACAGAGGAGAATGACACTGAA
TTACTCGAGAAAGCTCGCACTGCAGAAACCTCACAAGATTGCAAAGAGACCAGTGACATT
GCCCAGAATCATTTGCTGAGTAGAAATAAGCAATCTAGTATAATATACAGGCGGGGGCAG
AAACAACTAACTCGTCTCTTCATTAAGGAAGCAGAGCACGCGTTGCAGTTAGCATTGACC
GAAGAACTCTAG

Peptide Sequence

PEP ID

Solyc01g091860.3.1
PEP Infomation

SET domain-containing protein (AHRD V3.3 *** AT1G01920.2)
Sequence

MATPEEAKLHQFLQWLKLNRAELRGCRIKYSESSKGFGIFSSNHASDGILLVVPLDLAIT
PMGVLQDPLLGPECRAMFEEGEVDDRLLITLFLTVEHLRENSSWKPYFDMLPTTFGNPLW
FSEDELLELKGTTLYRAAQLQKKTLQSLFDEKVKRLAKKLLTLDGHPERDVKFEDFLWAN
SIFWSRALNIPFPRCYIFPMNSEGQDSDISSKVINSAIQTNGCGSLSNGESAKVPEYDTL
QDKVASAASVSQGEIVWVEGLVPGIDFCNHDFKAAATWEVDGTGATTGVPFSMYLLSAGE
NPSLIEKEISISYGNKGNEELLYLYGFVMNDNPDDYLMVHYPVEAIQNVDFSDSKAQLLE
AQKAELRCLLPRSLLNRGFFPPSNSSEEDKDKPVSSQLCNYSWSGQRKTPSYLHKLVFPA
DFLNALRTLAMKENELYRVSSLLEELVGSGGERQPTDTEVQAAVWEACGDSGALQLLVDL
LNMKMMDLEEGSGTEENDTELLEKARTAETSQDCKETSDIAQNHLLSRNKQSSIIYRRGQ
KQLTRLFIKEAEHALQLALTEEL*

Transcript Sequence

Transcript ID

Solyc01g091860.3.1
Transcript Infomation

SET domain-containing protein (AHRD V3.3 *** AT1G01920.2)
Sequence

ACTAATCAATCCCTTAATCAAAGCCCTTCACACGACAATTTTGTTTTCGTCGAAGAGCGA
CACAGAATCTCCAACACTGTCTTCGGCAATGGCGACTCCTGAAGAAGCTAAGCTCCACCA
GTTTCTTCAATGGCTAAAGTTAAACAGAGCAGAACTACGTGGTTGCAGAATCAAATACAG
TGAATCCAGTAAAGGGTTTGGAATTTTCTCATCTAATCATGCATCTGATGGGATACTACT
GGTGGTTCCATTAGATTTGGCTATAACTCCAATGGGTGTACTTCAAGATCCTCTTCTTGG
ACCTGAATGTAGGGCTATGTTTGAGGAAGGGGAAGTAGATGATAGACTCTTGATTACCTT
ATTTCTAACTGTGGAGCACCTACGAGAAAACTCTTCATGGAAGCCGTACTTTGATATGCT
TCCAACCACATTCGGGAATCCACTTTGGTTTTCTGAAGACGAGCTTTTAGAGCTTAAAGG
AACCACATTGTATCGGGCTGCTCAGTTGCAGAAAAAAACACTGCAGTCTTTATTTGATGA
AAAGGTGAAAAGGTTGGCTAAGAAGCTTTTAACTCTTGATGGACATCCAGAAAGAGATGT
GAAGTTTGAAGACTTCCTTTGGGCAAACTCCATATTTTGGAGTCGAGCACTAAATATCCC
TTTTCCGCGCTGCTATATATTTCCTATGAATTCAGAAGGACAAGATAGTGACATTTCTAG
CAAAGTCATCAATTCTGCAATACAAACTAATGGTTGCGGCAGTTTATCTAATGGAGAGTC
TGCAAAAGTACCCGAATATGATACACTCCAAGATAAAGTTGCTTCTGCTGCTTCCGTTTC
ACAAGGAGAGATAGTTTGGGTGGAAGGTCTGGTCCCAGGCATTGATTTTTGCAACCATGA
TTTCAAAGCTGCAGCAACATGGGAAGTTGATGGAACAGGAGCAACAACTGGAGTTCCTTT
CTCCATGTACCTTCTTTCTGCTGGAGAAAATCCTTCCCTGATCGAGAAAGAGATATCAAT
TAGCTATGGGAACAAGGGAAATGAGGAACTGCTGTACCTGTATGGATTCGTCATGAATGA
TAATCCTGATGACTACCTCATGGTTCATTATCCGGTGGAAGCTATTCAAAACGTTGATTT
CTCAGATTCGAAAGCTCAACTTCTTGAAGCACAGAAAGCTGAATTGAGATGTCTCTTACC
CCGAAGTTTGCTAAATCGCGGATTTTTCCCTCCATCCAACTCATCTGAGGAAGATAAAGA
TAAACCCGTCAGTAGTCAACTTTGTAACTATAGTTGGAGTGGTCAGCGAAAGACGCCCTC
TTACTTGCACAAGCTAGTTTTTCCTGCAGACTTTTTGAATGCATTGAGAACCTTAGCAAT
GAAAGAAAATGAGCTTTATCGTGTTTCTTCTCTACTTGAGGAGCTTGTTGGATCTGGAGG
AGAAAGGCAGCCAACTGACACAGAAGTTCAAGCAGCAGTATGGGAGGCTTGTGGAGATTC
TGGAGCTTTACAACTTCTTGTTGATCTGCTTAACATGAAGATGATGGATCTGGAAGAGGG
TTCAGGAACAGAGGAGAATGACACTGAATTACTCGAGAAAGCTCGCACTGCAGAAACCTC
ACAAGATTGCAAAGAGACCAGTGACATTGCCCAGAATCATTTGCTGAGTAGAAATAAGCA
ATCTAGTATAATATACAGGCGGGGGCAGAAACAACTAACTCGTCTCTTCATTAAGGAAGC
AGAGCACGCGTTGCAGTTAGCATTGACCGAAGAACTCTAGATAAATCTAACCCAAGATTT
TACATTCTGCAAGATAGCTATTTGAGCAAATATTTAGGTAATGATTGAAATGTCAAGCCG
GGCCTGCATTTCAGGTAAGCATTTTCTGACGGAATCTAAATGTATACCCAAGTTGGGACG
ATTCATGCTGGCTATTTAAGCAAAGGTTTTGGTAATGATCTTGTTTTTGTTGAGTATTCG
ACTGTGTTAATGCTTAGTAGATGGAGTTGCATTGCACCAATGCTCGTTAGATTAGTCGAA
ATGTGTGTAAGCCCAGATCCTTAGATAGTTTATTTGTGTTTTTCTGTCTCAAATCAGGGA
AGAGCTGAATTAATTGTGCAAAATTCATTGTTCCAAATGCTGAATGGTTAAAAGAGGAAA
AGGAGAGCCAATTTTCATGAAGTAATTTGATCTTAGCTTCTTTACTCAATACATTAGAAC
TTTTAACATAAAAAGTACATCAATCAGACAGAAAAAAGTTACTCACTACATAAGTTAGAA
CAGTAACATTCCAAGATCATTTAGAAGAACACGATTTTGTCGGTCACAAAAATGGTTAAA
ACTGGGTGTTTCTCTCTTTCGATGACCAGTTTTGAAACATAATAGTGACAAGAGATTGAT
CACTCTTCCAAGCCAGCAACATTCCTAAGTGTCCAGCCAATACCATATGCAGCAGCCCCA
GCAATGAGTCCATTGAAAAGGGTGATGCTTGCAGAAAGAGCATAGTTCTGACCAGCAATC
TTGGCCTTAGCTATCCCCAACAGTGCCAGGGCAACTGCAGAAAACACACAGGCGCCAATG
AACTTGTACGTGTCGTTTCTCGTGAACGGTATGAGCACGATGAATGCCAGAAGCGGGGCA
CAACCAAACACAATGAAGGCTGTAAATGTGATTAGCCCACTCTTCCATGGCTTGTCAGCT
TGATCTGGTGGCAATAATCCTTTCTGTACTGCCATCTTCTCATCTATCATGATGTCCCTA
TACTTTGCAAATATATTCACCACCTTGCACCAACAGAATAAATTGTTAATCTCGTGCAGG
GGACGGATTAAAAGATGCAGCTAAAACTGATGAGAACTCAAAAACATACTGTATTAGCAT
CAGTATCATTCATTCCAAGTTGCTGATAATGTCGAAGTAATTCCTCCTTCTGTGACCTGT
GCTGGTTAATGATATCCCACTCAGTTACTGTCCTCTCCTTGGCTGCTACATCTTTCTCCG
TGCTGCTTGACACATAGTCCCCAAACCCCATAGATATTCCATCCGCAACTAAATTAGCAA
AACCTAGCACCAAAACATCCACTGCAACAACAAAAACAAAAAAAAATAAACACAGTATGC
TCACTGCAATATTCTCCATTGAATATACAAATCGAAATTAATCGACCAAATGTGAAATCA
AAATTGGTTACCAGAGGAAAGATGGCCAGCAGAGATGGAAGAAATGAGGGAGAAAGAGGT
GACAATGGCATCAAGCCCTGCATACACAATGCTCTTCACTACTTCTCCTTTCCATGGCTC
TTTGGGTCTCCCATTCTTCCCTTTCTCCAATTCTCCATCTAATGATCTCAGTAATGGTGC
CCTAAATCCACCGTTGCTGTTTGTTTCCGCCATTTTTTTCTGATCAATTCACTTCAATGG
GCAAAAAAGAAAAAGTATTCTTATGCAATTGGTGTGTACACGTGTTTAACTCTAATTTAT
TGTCATCGATGCATCTTTCTTCTTTCGTCGCGTGTCCATTTCCAATTTTTAGCATCTTGT
AAACGGCGTGTGGCAGCCACAATACCCTTCATCTAAGGTTCCTTAATTTACTAACAATTT
TAGCCTATTTTAGGCCTTAATTGTCTTTTTGTTATTATAATATCG